>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                           
Query: 511     caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 570
               |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 7278406 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 7278347

                               
Query: 571     cagggaactgatcgct 586
               ||||||||||||||||
Sbjct: 7278346 cagggaactgatcgct 7278331



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                           
Query: 369     tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 428
               |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 7278563 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 7278504

                    
Query: 429     gaatc 433
               |||||
Sbjct: 7278503 gaatc 7278499

>dbj|AP004736.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0062A09
          Length = 173541

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                         
Query: 511   caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 570
             |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 12369 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 12310

                             
Query: 571   cagggaactgatcgct 586
             ||||||||||||||||
Sbjct: 12309 cagggaactgatcgct 12294



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 369   tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 428
             |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 12526 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 12467

                  
Query: 429   gaatc 433
             |||||
Sbjct: 12466 gaatc 12462

>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1381_H04
          Length = 130961

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                          
Query: 511    caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 570
              |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 130511 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 130452

                              
Query: 571    cagggaactgatcgct 586
              ||||||||||||||||
Sbjct: 130451 cagggaactgatcgct 130436



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                          
Query: 369    tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 428
              |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 130668 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 130609

                   
Query: 429    gaatc 433
              |||||
Sbjct: 130608 gaatc 130604

>dbj|AK103241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123H06, full
           insert sequence
          Length = 1603

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                       
Query: 511 caccctgagatgcagattcagatgtgggtgcaggagtcgagggatctgtcctctcagagt 570
           |||| |||| || |||||||||||| ||||||||||||||||| || || || || || |
Sbjct: 908 caccttgagttggagattcagatgtaggtgcaggagtcgaggggtcagttctttcggaat 849

                           
Query: 571 cagggaactgatcgct 586
           ||||||||||||||||
Sbjct: 848 cagggaactgatcgct 833



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 369  tgcctctttgctgccctctcgtgcttcggactgagagtaggagaaccgggatgacagttg 428
            |||||||||||||||||||| ||||| |||||    ||||||||||| || |||||||||
Sbjct: 1065 tgcctctttgctgccctctcatgctttggactagcggtaggagaaccaggctgacagttg 1006

                 
Query: 429  gaatc 433
            |||||
Sbjct: 1005 gaatc 1001

>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a
             Eukaryotic initiation factor 4A (eIF4a) pseudogene,
             complete sequence
          Length = 126502

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 131   aagtatgcatcatgtaaacaac 152
             ||||||||||||||||||||||
Sbjct: 40917 aagtatgcatcatgtaaacaac 40938

>gb|AF217651.1| Drosophila melanogaster c11.1 gene, partial cds; lozenge (lz) and c12.1
             genes, complete cds; and c12.2 gene, partial cds
          Length = 45142

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 523   cagattcagatgtgggtgcagg 544
             ||||||||||||||||||||||
Sbjct: 25681 cagattcagatgtgggtgcagg 25660

>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 523   cagattcagatgtgggtgcagg 544
             ||||||||||||||||||||||
Sbjct: 69814 cagattcagatgtgggtgcagg 69835

>ref|NM_078544.2| Drosophila melanogaster lozenge CG1689-RA (lz), mRNA
          Length = 3469

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 523  cagattcagatgtgggtgcagg 544
            ||||||||||||||||||||||
Sbjct: 2766 cagattcagatgtgggtgcagg 2745

>gb|AC158646.2| Mus musculus 10 BAC RP23-471J13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 167591

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 160   aaacacctaacaatttatgtca 181
             ||||||||||||||||||||||
Sbjct: 30870 aaacacctaacaatttatgtca 30891

>gb|U47849.2|DMU47849 Drosophila melanogaster Lozenge (lz) mRNA, complete cds
          Length = 3471

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 523  cagattcagatgtgggtgcagg 544
            ||||||||||||||||||||||
Sbjct: 2776 cagattcagatgtgggtgcagg 2755

>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 523    cagattcagatgtgggtgcagg 544
              ||||||||||||||||||||||
Sbjct: 253907 cagattcagatgtgggtgcagg 253886

>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 340   cctccgggaactcggcgtcgc 360
             |||||||||||||||||||||
Sbjct: 13297 cctccgggaactcggcgtcgc 13317

>gb|AC006467.13| Drosophila melanogaster clone BACR03L08, complete sequence
          Length = 170327

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 372   ctctttgctgccctctcgtgc 392
             |||||||||||||||||||||
Sbjct: 96287 ctctttgctgccctctcgtgc 96307

>gb|AC150553.1| Drosophila melanogaster clone BACR09H20, complete sequence
          Length = 179099

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 372    ctctttgctgccctctcgtgc 392
              |||||||||||||||||||||
Sbjct: 144162 ctctttgctgccctctcgtgc 144182

>gb|AE003781.5| Drosophila melanogaster chromosome 2L, section 80 of 83 of the complete
              sequence
          Length = 323775

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 372    ctctttgctgccctctcgtgc 392
              |||||||||||||||||||||
Sbjct: 310537 ctctttgctgccctctcgtgc 310557

>gb|AY662627.1| Crenadactylus ocellatus recombination activating gene 1 (RAG-1) gene,
            partial cds
          Length = 2834

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 485  gcttccactgtctcttttga 504
            ||||||||||||||||||||
Sbjct: 2514 gcttccactgtctcttttga 2495

>gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosome 3, complete sequence
          Length = 230133

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 483   tggcttccactgtctcttttgaaa 506
             ||||||||||||||||| ||||||
Sbjct: 30807 tggcttccactgtctctgttgaaa 30830

>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete
              sequence
          Length = 207863

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     tacccaaactgtcaactcat 73
              ||||||||||||||||||||
Sbjct: 185957 tacccaaactgtcaactcat 185938

>gb|AC129200.4| Mus musculus BAC clone RP24-221J22 from chromosome 2, complete sequence
          Length = 168365

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 481    tctggcttccactgtctcttttga 504
              |||||||||||||| |||||||||
Sbjct: 101595 tctggcttccactggctcttttga 101618

>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence
          Length = 166747

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     tacccaaactgtcaactcat 73
              ||||||||||||||||||||
Sbjct: 103316 tacccaaactgtcaactcat 103297

>gb|AC112151.3| Mus musculus BAC clone RP24-86M8 from 2, complete sequence
          Length = 216515

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    tctggcttccactgtctcttttga 504
              |||||||||||||| |||||||||
Sbjct: 196663 tctggcttccactggctcttttga 196640

>gb|AC149546.14| Medicago truncatula clone mth2-70o13, complete sequence
          Length = 124127

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      aaacatagcatgtaaaaaca 28
              ||||||||||||||||||||
Sbjct: 100129 aaacatagcatgtaaaaaca 100110

>gb|AC145164.11| Medicago truncatula clone mth2-27j21, complete sequence
          Length = 110295

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   acctaacaatttatgtcaac 183
             ||||||||||||||||||||
Sbjct: 25302 acctaacaatttatgtcaac 25283

>gb|AC137668.18| Medicago truncatula clone mth2-5f8, complete sequence
          Length = 133085

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    acctaacaatttatgtcaac 183
              ||||||||||||||||||||
Sbjct: 121784 acctaacaatttatgtcaac 121765

>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
          Length = 144639

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aaacatagcatgtaaaaaca 28
             ||||||||||||||||||||
Sbjct: 38543 aaacatagcatgtaaaaaca 38524

>emb|AL050341.18|HSDJ39G22 Human DNA sequence from clone RP1-39G22 on chromosome 1p32.1-34.3
             Contains the 3' end of the RLF gene for rearranged L-myc
             fusion sequence, the gene for a novel protein, the
             ZMPSTE24 gene for zinc metalloproteinase (STE24 homolog,
             yeast), a pseudogene similar to part of RIO kinase 2
             (yeast) (RIOK2), the COL9A2 gene for collagen, type IX,
             alpha 2 and a CpG island, complete sequence
          Length = 101685

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 463   gactcttgattgcttcggtc 482
             ||||||||||||||||||||
Sbjct: 32815 gactcttgattgcttcggtc 32834

>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2
             Contains the 5' end of the BCAS4 gene for breast carcinoma
             amplified sequence 4, the PARD6B gene for par-6
             partitioning defective 6 homolog beta (C. elegans) and two
             CpG islands, complete sequence
          Length = 117431

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 493   tgtctcttttgaaagctgca 512
             ||||||||||||||||||||
Sbjct: 99932 tgtctcttttgaaagctgca 99951

>gb|AC012151.14| Homo sapiens 12 BAC RP11-677C1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 83945

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    acccaaactgtcaactcatc 74
             ||||||||||||||||||||
Sbjct: 58046 acccaaactgtcaactcatc 58065

>gb|AC105074.5| Homo sapiens chromosome 18, clone RP11-693M3, complete sequence
          Length = 118724

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 520   atgcagattcagatgtgggtgcag 543
             |||||||||||| |||||||||||
Sbjct: 54889 atgcagattcaggtgtgggtgcag 54866

>gb|AC114485.2| Homo sapiens chromosome 1 clone RP11-202K23, complete sequence
          Length = 140621

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  atttatgtcaacatacaaca 191
            ||||||||||||||||||||
Sbjct: 2610 atttatgtcaacatacaaca 2629

>gb|AC034206.4| Homo sapiens chromosome 5 clone CTC-321K16, complete sequence
          Length = 108123

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 370   gcctctttgctgccctctcgtgct 393
             |||||||||||||||||| |||||
Sbjct: 16044 gcctctttgctgccctctggtgct 16067

>dbj|AK054247.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN
           full-length enriched library, clone:E330002O13
           product:unclassifiable, full insert sequence
          Length = 780

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 483 tggcttccactgtctcttttgaaa 506
           ||||||||||||||||| ||||||
Sbjct: 469 tggcttccactgtctctgttgaaa 446

>gb|AC141889.4| Mus musculus BAC clone RP23-434P15 from chromosome 3, complete sequence
          Length = 186264

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 483   tggcttccactgtctcttttgaaa 506
             ||||||||||||||||| ||||||
Sbjct: 97399 tggcttccactgtctctgttgaaa 97422

>emb|AL935170.11| Mouse DNA sequence from clone RP23-480P16 on chromosome 2, complete
              sequence
          Length = 181154

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 481    tctggcttccactgtctcttttga 504
              |||||||||||||| |||||||||
Sbjct: 135153 tctggcttccactggctcttttga 135130

>emb|AL935312.10| Mouse DNA sequence from clone RP23-56A7 on chromosome 2, complete
              sequence
          Length = 124236

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 493    tgtctcttttgaaagctgca 512
              ||||||||||||||||||||
Sbjct: 110146 tgtctcttttgaaagctgca 110127

>gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12 (LBNL H126), complete sequence
          Length = 134506

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 370    gcctctttgctgccctctcgtgct 393
              |||||||||||||||||| |||||
Sbjct: 109589 gcctctttgctgccctctggtgct 109612

>gb|AC164108.2| Mus musculus BAC clone RP24-96K15 from chromosome 16, complete sequence
          Length = 180800

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    aacacctaacaatttatgtc 180
              ||||||||||||||||||||
Sbjct: 109323 aacacctaacaatttatgtc 109304

>emb|AL805981.11| Mouse DNA sequence from clone RP23-275G4 on chromosome 4, complete
             sequence
          Length = 210185

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     gaaaacatagcatgtaaaaa 26
             ||||||||||||||||||||
Sbjct: 97535 gaaaacatagcatgtaaaaa 97516


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,289,059
Number of Sequences: 3902068
Number of extensions: 4289059
Number of successful extensions: 76502
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76396
Number of HSP's gapped (non-prelim): 102
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)