ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19f22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KLF5_MOUSE (Q9Z0Z7) Krueppel-like factor 5 (Intestinal-enriched ... 28 4.9

>KLF5_MOUSE (Q9Z0Z7) Krueppel-like factor 5 (Intestinal-enriched krueppel-like|
           factor) (Transcription factor BTEB2) (Basic
           transcription element-binding protein 2) (BTE-binding
           protein 2)
          Length = 446

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = +3

Query: 90  PTLSTTXLASLAEHIPKLQQTLPXXXAKQPPCSSNER 200
           P+ + T  + LA H P L  TLP      PP   N R
Sbjct: 315 PSYAATIASKLAIHNPNLPATLPVNSPTLPPVRYNRR 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,875,612
Number of Sequences: 219361
Number of extensions: 278546
Number of successful extensions: 497
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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