>IF3I_HUMAN (Q9Y262) Eukaryotic translation initiation factor 3 subunit|
           6-interacting protein
          Length = 564

 Score = 82.8 bits (203), Expect = 5e-16
 Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
 Frame = -3

Query: 485 IRSYLKLYSAITITKLAQYMEMDEATLRSILMTYKHKMHAV-------DSNGKIVSSADF 327
           IRS+LKLY+ + + KLA ++++ E   R  L+ +KHKM  +         +G+  S+++ 
Sbjct: 460 IRSFLKLYTTMPVAKLAGFLDLTEQEFRIQLLVFKHKMKNLVWTSGISALDGEFQSASEV 519

Query: 326 DFYINEDVIHVVESKSTKRHGDYFLRQILKFEETIAELDKV 204
           DFYI++D+IH+ ++K  +R+GD+F+RQI KFEE    L K+
Sbjct: 520 DFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLKKM 560

>Y3533_METJA (Q60290) Hypothetical protein MJECL33|
          Length = 408

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = -3

Query: 395 LMTYKHKMHAVDSNGKIVSSADFDFYINEDVIH----VVESKSTKRHGDYFLRQILKFEE 228
           L  +KH M    S  KIVS  D D ++ ED+ +     V+  S ++H +   + I  +E+
Sbjct: 225 LHEFKHLMRITKSKIKIVSEDDKDKFVLEDIYYWGKFTVKGTSIEKHNEIVDKTIENYEQ 284

Query: 227 TIAELDKVQLD 195
            I  ++   +D
Sbjct: 285 KIEIIEDSLID 295

>RNH_WIGBR (Q8D3D3) Ribonuclease H (EC 3.1.26.4) (RNase H)|
          Length = 157

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +3

Query: 189 CSVKLYLVQFSNGFFKL*NLS*KVVPMALGRLGLHDMNNILINIEIK 329
           C  KLY  + SNG++   N   +++   +    LHDM NI+IN + K
Sbjct: 27  CGKKLYK-EISNGYYLTTNNRMEIMAAIIALESLHDMYNIIINTDSK 72

>STH1_YEAST (P32597) Nuclear protein STH1/NPS1 (EC 3.6.1.-) (ATP-dependent|
            helicase STH1) (Chromatin structure remodeling complex
            protein STH1) (SNF2 homolog)
          Length = 1359

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 17/60 (28%), Positives = 30/60 (50%)
 Frame = -3

Query: 374  MHAVDSNGKIVSSADFDFYINEDVIHVVESKSTKRHGDYFLRQILKFEETIAELDKVQLD 195
            M  +D +GK++ +  FD            +KST    + FLR++++ E    + DK +LD
Sbjct: 930  MQKLDIDGKVIQAGKFD------------NKSTAEEQEAFLRRLIESETNRDDDDKAELD 977

>IE63_EBV (Q04360) Transcriptional regulator IE63 homolog (Diffuse early|
           antigen)
          Length = 438

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +2

Query: 212 PIQQWFLQTLKSVLKSSPHGAWSTWTPRHE 301
           PIQ  FLQ++ +V      GAW    PRHE
Sbjct: 197 PIQDPFLQSMLAVAAHPEIGAWQKVQPRHE 226

>BOSS_DROME (P22815) Protein bride of sevenless precursor|
          Length = 896

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = -1

Query: 223 LLNWTRYSLTEHGKDHRGEKHP----RSCFHF 140
           L+NW R SL++H K  RGE+H      SCF+F
Sbjct: 377 LMNWLRGSLSKHCK--RGEEHDLYVLESCFNF 406

>YAI5_SCHPO (Q09893) Hypothetical protein C24B11.05 in chromosome I|
          Length = 226

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
 Frame = -3

Query: 425 EMDEATLRSILMTYKHKMHAVD-SNGKIVSSADFDFYINEDVIHVVESKSTKRHGDYFLR 249
           EM E  +R   +T K K   VD S G I+ + +F +     ++   +     + G + +R
Sbjct: 152 EMYERVMREAGVTDKDKCIFVDDSYGNILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIR 211

Query: 248 QILKFEETIAELD 210
            I KF+  + E+D
Sbjct: 212 DIHKFKHLLDEID 224

>SESN1_XENLA (P58003) Sestrin-1 (p53-regulated protein PA26) (XPA26)|
          Length = 481

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 4/85 (4%)
 Frame = -3

Query: 455 ITITKLAQYMEMDEATLRSILMTYKHKMHAVDSN----GKIVSSADFDFYINEDVIHVVE 288
           +T   +A + ++D +TLR  +  Y H M  +  +    G+I    D  F +    +    
Sbjct: 374 LTYNTMAMHKDVDTSTLRRAVWNYVHCMFGIRYDDYDYGEINQLLDRSFKVYIKNVVCSP 433

Query: 287 SKSTKRHGDYFLRQILKFEETIAEL 213
            K++KR  D F RQ    E+    L
Sbjct: 434 EKTSKRMYDGFWRQFKHSEKVHVNL 458

>TRA1_DROME (Q8I8U7) Transcription-associated protein 1 (dTRA1)|
          Length = 3805

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = +3

Query: 285  GLHDMNNILINIEIKVCTGYNFPITVNCMHFVLVRHKNRPKCCLIHFHILGKFGNGN 455
            GL  +   + N++      +  P+    M  +    +N+    L+ F +LGKFG GN
Sbjct: 876  GLRTLELCVDNLQPDFLYDHIQPVRAALMQALWKTLRNQDNAALVAFRVLGKFGGGN 932

>UGGG1_HUMAN (Q9NYU2) UDP-glucose:glycoprotein glucosyltransferase 1 precursor (EC|
            2.4.1.-) (UDP-glucose ceramide glucosyltransferase-like
            1) (UDP--Glc:glycoprotein glucosyltransferase) (HUGT1)
          Length = 1531

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -3

Query: 395  LMTYKHKMHAVDSNGKIVSSADFDFYINEDVIHVVESKSTKRHGDYFLRQI--LKFEETI 222
            ++  K    AV SNG+I+   +     N+D  H++E+   K  G      I  L+ EE +
Sbjct: 859  VLKLKKGQRAVISNGRIIGPLEDSELFNQDDFHLLENIILKTSGQKIKSHIQQLRVEEDV 918

Query: 221  A 219
            A
Sbjct: 919  A 919

>FLID_TREPA (O83842) Flagellar hook-associated protein 2 (HAP2) (Filament cap|
           protein) (Flagellar cap protein)
          Length = 722

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
 Frame = -3

Query: 488 GIRSYLKLYSAITITKLAQYMEMDEATLRSILMTYKHKMHAV---DSNGKIVSSADFDF- 321
           GI +     S I   +L  Y+E+DE  L S L   K ++ A+   DS+G ++      F 
Sbjct: 584 GISTKAHASSGINTAQLRGYLEIDEEKLHSSLNAQKDQVRALFGHDSDGDLLVDNGVAFT 643

Query: 320 -------YINEDVIHVVES-------KSTKRHGDYFLRQILKFEETI 222
                  Y+    I  + S       KST++  + + +Q+ K E  +
Sbjct: 644 LTELLNPYLGRSGIFAIRSNGVDERIKSTEKRVETYDKQLEKKEREL 690

>ZN409_HUMAN (Q9UPU6) Zinc finger protein 409|
          Length = 862

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = -1

Query: 238 SLKKPLLNWTRYSLTEHGKDHRGEKHPRSCFHFPFSFYGRHLWRLMLAEHYLC 80
           +LK P  NW  Y   +    H  EKHP S  H  +   G    RL   E Y C
Sbjct: 452 TLKCPKCNW-HYKYQQTLDVHMQEKHPESNSHCSYCSAGGAHPRLARGESYNC 503


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,897,194
Number of Sequences: 219361
Number of extensions: 1426309
Number of successful extensions: 4291
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4287
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)