| Clone Name | rbags19f19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK070838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073J07, full insert sequence Length = 1877 Score = 293 bits (148), Expect = 3e-76 Identities = 259/296 (87%) Strand = Plus / Minus Query: 184 taccatgctcagtcaagctgtaccttgtccaattcagcaatggtttcttcaaactttaaa 243 ||||| |||||||||| |||||| || |||| |||| |||| |||| |||||||||||| Sbjct: 1605 taccaggctcagtcaaactgtactttctccagttcaccaatcatttcctcaaactttaaa 1546 Query: 244 atctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgacatgaata 303 |||||||| |||||||| || |||||||||||| | | |||||||||| |||||||||| Sbjct: 1545 atctgtctcaaaaagtaatcaccatggcgcttgattggtttggactccatgacatgaata 1486 Query: 304 acatcctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtca 363 |||||||| ||||| ||||||||||||||||| ||||| ||||| || |||||| ||||| Sbjct: 1485 acatcctccttaatgtagaaatcaaagtctgcgctggaaacaatctttccattattgtca 1426 Query: 364 actgcatgcattttgtgcttgtacgtcataagaatagacctaagtgttgcctcatccatt 423 ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||| | Sbjct: 1425 actgcatgcattttgtgcttgtacgtcatcaggatagacctaagcgttgcctcatccact 1366 Query: 424 tccatatactgggcaagtttggtaatggtaattgctgagtataactttagatagct 479 |||||||| || |||||||||| ||| || |||| ||| || || ||||||||||| Sbjct: 1365 tccatatattgcgcaagtttggcaatagttattgttgaatacaattttagatagct 1310
>gb|BT018666.1| Zea mays clone EL01N0510C04.d mRNA sequence Length = 1646 Score = 228 bits (115), Expect = 1e-56 Identities = 247/291 (84%) Strand = Plus / Minus Query: 192 tcagtcaagctgtaccttgtccaattcagcaatggtttcttcaaactttaaaatctgtct 251 |||||||||||||||||| |||| |||| |||| |||| |||||||| ||||| ||||| Sbjct: 1575 tcagtcaagctgtaccttctccagttcaccaatcatttcctcaaacttcaaaatttgtct 1516 Query: 252 taaaaagtagtccccatggcgcttggtcgacttggactccacgacatgaataacatcctc 311 |||||||| || ||||| |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 1515 caaaaagtaatcaccatgacgcttggtaggtttggactccacaacatgaatcacatcctc 1456 Query: 312 attaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactgcatg 371 || ||||| |||||||||||||| ||||| || || || | ||||||||||||||| Sbjct: 1455 gacgatgtagaagtcaaagtctgcacttgatactatctttccttcactgtcaactgcatg 1396 Query: 372 cattttgtgcttgtacgtcataagaatagacctaagtgttgcctcatccatttccatata 431 ||||||||||||||| ||||| || || ||||| |||||||| ||||||| ||||||||| Sbjct: 1395 cattttgtgcttgtatgtcatcaggatcgaccttagtgttgcttcatccacttccatata 1336 Query: 432 ctgggcaagtttggtaatggtaattgctgagtataactttagatagctccg 482 |||||||||||| ||||||| |||| ||| |||| ||| ||||| ||||| Sbjct: 1335 ttgggcaagtttgctaatggttattgttgaatatagcttcagataactccg 1285
>gb|AY104376.1| Zea mays PCO082841 mRNA sequence Length = 1869 Score = 228 bits (115), Expect = 1e-56 Identities = 247/291 (84%) Strand = Plus / Minus Query: 192 tcagtcaagctgtaccttgtccaattcagcaatggtttcttcaaactttaaaatctgtct 251 |||||||||||||||||| |||| |||| |||| |||| |||||||| ||||| ||||| Sbjct: 1665 tcagtcaagctgtaccttctccagttcaccaatcatttcctcaaacttcaaaatttgtct 1606 Query: 252 taaaaagtagtccccatggcgcttggtcgacttggactccacgacatgaataacatcctc 311 |||||||| || ||||| |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 1605 caaaaagtaatcaccatgacgcttggtaggtttggactccacaacatgaatcacatcctc 1546 Query: 312 attaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactgcatg 371 || ||||| |||||||||||||| ||||| || || || | ||||||||||||||| Sbjct: 1545 gacgatgtagaagtcaaagtctgcacttgatactatctttccttcactgtcaactgcatg 1486 Query: 372 cattttgtgcttgtacgtcataagaatagacctaagtgttgcctcatccatttccatata 431 ||||||||||||||| ||||| || || ||||| |||||||| ||||||| ||||||||| Sbjct: 1485 cattttgtgcttgtatgtcatcaggatcgaccttagtgttgcttcatccacttccatata 1426 Query: 432 ctgggcaagtttggtaatggtaattgctgagtataactttagatagctccg 482 |||||||||||| ||||||| |||| ||| |||| ||| ||||| ||||| Sbjct: 1425 ttgggcaagtttgctaatggttattgttgaatatagcttcagataactccg 1375
>dbj|AK104688.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-F08, full insert sequence Length = 1242 Score = 135 bits (68), Expect = 2e-28 Identities = 176/212 (83%) Strand = Plus / Minus Query: 232 tcaaactttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactcc 291 |||||||| ||||||||||| |||||||| || |||||| |||||| ||||||| || Sbjct: 985 tcaaacttcaaaatctgtctcaaaaagtaatcaccatggttcttggttaacttggattca 926 Query: 292 acgacatgaataacatcctcattaatatagaaatcaaagtctgcactggatacaattttc 351 || |||||||||| ||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 925 acaacatgaataatgtcctcatcaatatagaagtcaaagtctgcactggatatgaccttt 866 Query: 352 ccattactgtcaactgcatgcattttgtgcttgtacgtcataagaatagacctaagtgtt 411 || | |||||| | || |||||||||||||||||| ||||||||||| | ||| ||||| Sbjct: 865 ccgtcactgtcgattgaatgcattttgtgcttgtatgtcataagaattgtccttagtgta 806 Query: 412 gcctcatccatttccatatactgggcaagttt 443 ||||||||| ||||| || | ||||||||| Sbjct: 805 acctcatccacatccatgtatttggcaagttt 774
>dbj|AK068760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160I02, full insert sequence Length = 1948 Score = 135 bits (68), Expect = 2e-28 Identities = 176/212 (83%) Strand = Plus / Minus Query: 232 tcaaactttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactcc 291 |||||||| ||||||||||| |||||||| || |||||| |||||| ||||||| || Sbjct: 1553 tcaaacttcaaaatctgtctcaaaaagtaatcaccatggttcttggttaacttggattca 1494 Query: 292 acgacatgaataacatcctcattaatatagaaatcaaagtctgcactggatacaattttc 351 || |||||||||| ||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 1493 acaacatgaataatgtcctcatcaatatagaagtcaaagtctgcactggatatgaccttt 1434 Query: 352 ccattactgtcaactgcatgcattttgtgcttgtacgtcataagaatagacctaagtgtt 411 || | |||||| | || |||||||||||||||||| ||||||||||| | ||| ||||| Sbjct: 1433 ccgtcactgtcgattgaatgcattttgtgcttgtatgtcataagaattgtccttagtgta 1374 Query: 412 gcctcatccatttccatatactgggcaagttt 443 ||||||||| ||||| || | ||||||||| Sbjct: 1373 acctcatccacatccatgtatttggcaagttt 1342
>dbj|AK067567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108C14, full insert sequence Length = 1950 Score = 135 bits (68), Expect = 2e-28 Identities = 176/212 (83%) Strand = Plus / Minus Query: 232 tcaaactttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactcc 291 |||||||| ||||||||||| |||||||| || |||||| |||||| ||||||| || Sbjct: 1598 tcaaacttcaaaatctgtctcaaaaagtaatcaccatggttcttggttaacttggattca 1539 Query: 292 acgacatgaataacatcctcattaatatagaaatcaaagtctgcactggatacaattttc 351 || |||||||||| ||||||| ||||||||| ||||||||||||||||||| | || Sbjct: 1538 acaacatgaataatgtcctcatcaatatagaagtcaaagtctgcactggatatgaccttt 1479 Query: 352 ccattactgtcaactgcatgcattttgtgcttgtacgtcataagaatagacctaagtgtt 411 || | |||||| | || |||||||||||||||||| ||||||||||| | ||| ||||| Sbjct: 1478 ccgtcactgtcgattgaatgcattttgtgcttgtatgtcataagaattgtccttagtgta 1419 Query: 412 gcctcatccatttccatatactgggcaagttt 443 ||||||||| ||||| || | ||||||||| Sbjct: 1418 acctcatccacatccatgtatttggcaagttt 1387
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 308 cctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactg 367 |||| ||||| ||||||||||||||||| ||||| ||||| || |||||| ||||||||| Sbjct: 7125256 cctccttaatgtagaaatcaaagtctgcgctggaaacaatctttccattattgtcaactg 7125315 Query: 368 catgcattttgtgcttgtacgtcataagaatagacct 404 ||||||||||||||||||||||||| || |||||||| Sbjct: 7125316 catgcattttgtgcttgtacgtcatcaggatagacct 7125352 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 237 ctttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgac 296 ||||||||||||||| |||||||| || |||||||||||| | | |||||||||| ||| Sbjct: 7124854 ctttaaaatctgtctcaaaaagtaatcaccatggcgcttgattggtttggactccatgac 7124913 Query: 297 atgaataacatcct 310 |||||||||||||| Sbjct: 7124914 atgaataacatcct 7124927 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 399 agacctaagtgttgcctcatccatttccatatactgggcaagtttggtaatggtaattgc 458 ||||||||| ||||||||||||| ||||||||| || |||||||||| ||| || |||| Sbjct: 7125420 agacctaagcgttgcctcatccacttccatatattgcgcaagtttggcaatagttattgt 7125479 Query: 459 tgagtataactttagatagct 479 ||| || || ||||||||||| Sbjct: 7125480 tgaatacaattttagatagct 7125500
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 308 cctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactg 367 |||| ||||| ||||||||||||||||| ||||| ||||| || |||||| ||||||||| Sbjct: 19904 cctccttaatgtagaaatcaaagtctgcgctggaaacaatctttccattattgtcaactg 19963 Query: 368 catgcattttgtgcttgtacgtcataagaatagacct 404 ||||||||||||||||||||||||| || |||||||| Sbjct: 19964 catgcattttgtgcttgtacgtcatcaggatagacct 20000 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 237 ctttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgac 296 ||||||||||||||| |||||||| || |||||||||||| | | |||||||||| ||| Sbjct: 19502 ctttaaaatctgtctcaaaaagtaatcaccatggcgcttgattggtttggactccatgac 19561 Query: 297 atgaataacatcct 310 |||||||||||||| Sbjct: 19562 atgaataacatcct 19575 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 399 agacctaagtgttgcctcatccatttccatatactgggcaagtttggtaatggtaattgc 458 ||||||||| ||||||||||||| ||||||||| || |||||||||| ||| || |||| Sbjct: 20068 agacctaagcgttgcctcatccacttccatatattgcgcaagtttggcaatagttattgt 20127 Query: 459 tgagtataactttagatagct 479 ||| || || ||||||||||| Sbjct: 20128 tgaatacaattttagatagct 20148
>dbj|AP003434.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0452F10 Length = 145120 Score = 121 bits (61), Expect = 2e-24 Identities = 88/97 (90%) Strand = Plus / Plus Query: 308 cctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactg 367 |||| ||||| ||||||||||||||||| ||||| ||||| || |||||| ||||||||| Sbjct: 112836 cctccttaatgtagaaatcaaagtctgcgctggaaacaatctttccattattgtcaactg 112895 Query: 368 catgcattttgtgcttgtacgtcataagaatagacct 404 ||||||||||||||||||||||||| || |||||||| Sbjct: 112896 catgcattttgtgcttgtacgtcatcaggatagacct 112932 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 237 ctttaaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgac 296 ||||||||||||||| |||||||| || |||||||||||| | | |||||||||| ||| Sbjct: 112434 ctttaaaatctgtctcaaaaagtaatcaccatggcgcttgattggtttggactccatgac 112493 Query: 297 atgaataacatcct 310 |||||||||||||| Sbjct: 112494 atgaataacatcct 112507 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 399 agacctaagtgttgcctcatccatttccatatactgggcaagtttggtaatggtaattgc 458 ||||||||| ||||||||||||| ||||||||| || |||||||||| ||| || |||| Sbjct: 113000 agacctaagcgttgcctcatccacttccatatattgcgcaagtttggcaatagttattgt 113059 Query: 459 tgagtataactttagatagct 479 ||| || || ||||||||||| Sbjct: 113060 tgaatacaattttagatagct 113080
>ref|NM_188595.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 119 bits (60), Expect = 9e-24 Identities = 84/92 (91%) Strand = Plus / Minus Query: 313 ttaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactgcatgc 372 ||||| ||||||||||||||||| ||||| ||||| || |||||| |||||||||||||| Sbjct: 1478 ttaatgtagaaatcaaagtctgcgctggaaacaatctttccattattgtcaactgcatgc 1419 Query: 373 attttgtgcttgtacgtcataagaatagacct 404 |||||||||||||||||||| || |||||||| Sbjct: 1418 attttgtgcttgtacgtcatcaggatagacct 1387 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 402 cctaagtgttgcctcatccatttccatatactgggcaagtttggtaatggtaattgctga 461 |||||| ||||||||||||| ||||||||| || |||||||||| ||| || |||| ||| Sbjct: 1356 cctaagcgttgcctcatccacttccatatattgcgcaagtttggcaatagttattgttga 1297 Query: 462 gtataactttagatagct 479 || || ||||||||||| Sbjct: 1296 atacaattttagatagct 1279
>gb|BT017334.1| Zea mays clone EL01N0321B01.c mRNA sequence Length = 320 Score = 113 bits (57), Expect = 6e-22 Identities = 129/153 (84%) Strand = Plus / Minus Query: 192 tcagtcaagctgtaccttgtccaattcagcaatggtttcttcaaactttaaaatctgtct 251 |||||||||||||||||| |||| |||| |||| |||| |||||||| ||||| ||||| Sbjct: 178 tcagtcaagctgtaccttctccagttcaccaatcatttcctcaaacttcaaaatttgtct 119 Query: 252 taaaaagtagtccccatggcgcttggtcgacttggactccacgacatgaataacatcctc 311 |||||||| || ||||| |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 118 caaaaagtaatcaccatgacgcttggtaggtttggactccacaacatgaatcacatcctc 59 Query: 312 attaatatagaaatcaaagtctgcactggatac 344 || ||||| |||||||||||||| ||||| Sbjct: 58 gacgatgtagaagtcaaagtctgcacttgatac 26
>gb|AC104275.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_C10, complete sequence Length = 138209 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 308 cctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactg 367 |||||| ||||||||| ||||||||||||||||||| | || || | |||||| | || Sbjct: 99750 cctcatcaatatagaagtcaaagtctgcactggatatgacctttccgtcactgtcgattg 99809 Query: 368 catgcattttgtgcttgtacgtcataagaat 398 |||||||||||||||||| ||||||||||| Sbjct: 99810 aatgcattttgtgcttgtatgtcataagaat 99840 Score = 48.1 bits (24), Expect = 0.027 Identities = 54/64 (84%) Strand = Plus / Plus Query: 241 aaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgacatga 300 ||||||||||| |||||||| || |||||| |||||| ||||||| || || |||||| Sbjct: 98668 aaaatctgtctcaaaaagtaatcaccatggttcttggttaacttggattcaacaacatga 98727 Query: 301 ataa 304 |||| Sbjct: 98728 ataa 98731
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 308 cctcattaatatagaaatcaaagtctgcactggatacaattttcccattactgtcaactg 367 |||||| ||||||||| ||||||||||||||||||| | || || | |||||| | || Sbjct: 7663355 cctcatcaatatagaagtcaaagtctgcactggatatgacctttccgtcactgtcgattg 7663414 Query: 368 catgcattttgtgcttgtacgtcataagaat 398 |||||||||||||||||| ||||||||||| Sbjct: 7663415 aatgcattttgtgcttgtatgtcataagaat 7663445 Score = 48.1 bits (24), Expect = 0.027 Identities = 54/64 (84%) Strand = Plus / Plus Query: 241 aaaatctgtcttaaaaagtagtccccatggcgcttggtcgacttggactccacgacatga 300 ||||||||||| |||||||| || |||||| |||||| ||||||| || || |||||| Sbjct: 7662273 aaaatctgtctcaaaaagtaatcaccatggttcttggttaacttggattcaacaacatga 7662332 Query: 301 ataa 304 |||| Sbjct: 7662333 ataa 7662336
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 403 ctaagtgttgcctcatccattt 424 |||||||||||||||||||||| Sbjct: 2721786 ctaagtgttgcctcatccattt 2721765
>emb|Z69380.1|SPAC4H3 S.pombe chromosome I cosmid c4H3 Length = 34635 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 tcatccatttccatatactgg 435 ||||||||||||||||||||| Sbjct: 20711 tcatccatttccatatactgg 20691
>emb|AL049543.17|HS1186N24 Human DNA sequence from clone RP5-1186N24 on chromosome 6p21.2-22.2. Contains part of a novel zinc finger protein gene, the GPX5 gene for glutathione peroxidase 5 (epididymal androgen-related protein), the 5' end of a glutathion peroxidase pseudogene, ESTs, STSs, GSSs and a CpG island, complete sequence Length = 95594 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 tttaaaatctgtcttaaaaagtagt 262 |||||||| |||||||||||||||| Sbjct: 87604 tttaaaatttgtcttaaaaagtagt 87580
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence Length = 187543 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 tttaaaatctgtcttaaaaagtagt 262 |||||||| |||||||||||||||| Sbjct: 181707 tttaaaatttgtcttaaaaagtagt 181731
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tgtttctctcctcgatgatc 181 |||||||||||||||||||| Sbjct: 658599 tgtttctctcctcgatgatc 658580
>gb|AC186170.1| Ornithorhynchus anatinus chromosome UNK clone OABb-12B13, complete sequence Length = 134720 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 431 actgggcaagtttggtaatggtaattgctgag 462 |||||||| || |||||||||||| ||||||| Sbjct: 44537 actgggcaggtgtggtaatggtaactgctgag 44568
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 tttcttcaaactttaaaatc 246 |||||||||||||||||||| Sbjct: 25363 tttcttcaaactttaaaatc 25344
>gb|AC116478.14| Mus musculus chromosome 8, clone RP23-396E23, complete sequence Length = 193468 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 caggataatacagtgaattg 44 |||||||||||||||||||| Sbjct: 144561 caggataatacagtgaattg 144542
>gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosome 5, complete sequence Length = 162871 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 366 tgcatgcattttgtgcttgt 385 |||||||||||||||||||| Sbjct: 35874 tgcatgcattttgtgcttgt 35893
>gb|AC156993.3| Mus musculus chromosome 8, clone RP23-79L16, complete sequence Length = 145880 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caggataatacagtgaattg 44 |||||||||||||||||||| Sbjct: 92854 caggataatacagtgaattg 92873
>gb|AC159098.6| Mus musculus chromosome 8, clone RP24-391C9, complete sequence Length = 184137 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 caggataatacagtgaattg 44 |||||||||||||||||||| Sbjct: 1854 caggataatacagtgaattg 1873
>gb|AC116363.2| Homo sapiens chromosome 5 clone RP11-758E17, complete sequence Length = 194619 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ttcttcaaactttaaaatct 247 |||||||||||||||||||| Sbjct: 80314 ttcttcaaactttaaaatct 80295
>gb|AC092288.3| Homo sapiens chromosome 5 clone CTD-2293K3, complete sequence Length = 93844 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 ttcttcaaactttaaaatct 247 |||||||||||||||||||| Sbjct: 16057 ttcttcaaactttaaaatct 16038
>gb|AC109494.3| Homo sapiens chromosome 5 clone RP11-783J1, complete sequence Length = 172180 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ttcttcaaactttaaaatct 247 |||||||||||||||||||| Sbjct: 39966 ttcttcaaactttaaaatct 39985
>gb|AC113036.8| Mus musculus chromosome 13, clone RP23-223B10, complete sequence Length = 190133 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tttaaaatctgtcttaaaaa 257 |||||||||||||||||||| Sbjct: 61231 tttaaaatctgtcttaaaaa 61212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,150,765 Number of Sequences: 3902068 Number of extensions: 4150765 Number of successful extensions: 87479 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87315 Number of HSP's gapped (non-prelim): 156 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)