ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19f16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470426.1| Oryza sativa (japonica cultivar-group), mRNA 260 5e-66
2dbj|AK102145.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
3dbj|AK059105.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 5e-66
4gb|AY107030.1| Zea mays PCO111338 mRNA sequence 214 3e-52
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 129 1e-26
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
7gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genom... 129 1e-26
8gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosom... 50 0.009
9gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome... 50 0.009
10ref|NM_146982.1| Mus musculus olfactory receptor 1257 (Olfr1257)... 44 0.53
11gb|AY318459.1| Mus musculus olfactory receptor Olfr1257 (Olfr125... 44 0.53
12gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome... 44 0.53
13ref|NM_001000572.1| Rattus norvegicus olfactory receptor 722 (pr... 44 0.53
14gb|AY073106.1| Mus musculus olfactory receptor MOR232-1 gene, co... 44 0.53
15emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chr... 44 0.53
16gb|CP000114.1| Streptococcus agalactiae A909, complete genome 42 2.1
17gb|AY256959.1| Streptococcus agalactiae 1,6-alpha-glucosidase (d... 42 2.1
18gb|AE014278.1| Streptococcus agalactiae 2603V/R section 88 of 10... 42 2.1
19emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 2.1
20emb|AL766854.1|SAG766854 Streptococcus agalactiae NEM316 complet... 42 2.1
21gb|AC154869.3| Monodelphis domestica, clone XX-216E9, complete s... 42 2.1
22gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome... 40 8.3
23gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, compl... 40 8.3
24ref|XM_724243.1| Plasmodium yoelii yoelii str. 17XNL m1-family a... 40 8.3
25gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, comple... 40 8.3
26ref|XM_739947.1| Plasmodium chabaudi chabaudi m1-family aminopep... 40 8.3
27gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, comp... 40 8.3
28gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, co... 40 8.3
29dbj|AK125720.1| Homo sapiens cDNA FLJ43732 fis, clone TESTI1000491 40 8.3
30gb|AC073370.7| Homo sapiens chromosome 10 clone RP11-472G21, com... 40 8.3
31gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, com... 40 8.3
32gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complet... 40 8.3
33gb|AC119998.13| Mus musculus chromosome 17, clone RP24-128A6, co... 40 8.3
34gb|AC127581.4| Mus musculus BAC clone RP24-88B13 from 9, complet... 40 8.3
35gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete... 40 8.3
36gb|U73630.1|U73630 Human Chromosome 11 Overlapping Cosmids cSRL1... 40 8.3 
>ref|XM_470426.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2223

 Score =  260 bits (131), Expect = 5e-66
 Identities = 266/311 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  cgctcgagatacaacggggtctgcatttctatgagccgagatatcgcccttcggaacgca 357
            ||||| |||||||  | |||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 2135 cgctccagatacagtgaggtctgcatttctatgagacgggatatcgccctacggaatgca 2076

                                                                        
Query: 358  aacatctcttcttgaccagacagcattgacactagacctttagtagagggtcctacacca 417
            |||||||||||||| |||||||  |||| |||||| ||| ||| ||| ||  || |||||
Sbjct: 2075 aacatctcttcttggccagacaaaattgccactaggcctgtaggagaaggcgctgcacca 2016

                                                                        
Query: 418  acattgccttctgcggaaacatccctccttaactttgacccttccgcttcagtttcaaac 477
            ||||| ||||||||  ||||||||||||| | ||||| |||||| ||||||  ||| |||
Sbjct: 2015 acattaccttctgctaaaacatccctcctaagctttgccccttcagcttcaccttcgaac 1956

                                                                        
Query: 478  tggaaactctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatg 537
            || |||||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1955 tgaaaactctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatg 1896

                                                                        
Query: 538  ggtaaggtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtg 597
            | | ||| ||||| ||||| ||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 1895 gatgaggcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtg 1836

                       
Query: 598  atgaatcttct 608
            || ||||||||
Sbjct: 1835 ataaatcttct 1825
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>dbj|AK102145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086B08, full
            insert sequence
          Length = 2103

 Score =  260 bits (131), Expect = 5e-66
 Identities = 266/311 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  cgctcgagatacaacggggtctgcatttctatgagccgagatatcgcccttcggaacgca 357
            ||||| |||||||  | |||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 1850 cgctccagatacagtgaggtctgcatttctatgagacgggatatcgccctacggaatgca 1791

                                                                        
Query: 358  aacatctcttcttgaccagacagcattgacactagacctttagtagagggtcctacacca 417
            |||||||||||||| |||||||  |||| |||||| ||| ||| ||| ||  || |||||
Sbjct: 1790 aacatctcttcttggccagacaaaattgccactaggcctgtaggagaaggcgctgcacca 1731

                                                                        
Query: 418  acattgccttctgcggaaacatccctccttaactttgacccttccgcttcagtttcaaac 477
            ||||| ||||||||  ||||||||||||| | ||||| |||||| ||||||  ||| |||
Sbjct: 1730 acattaccttctgctaaaacatccctcctaagctttgccccttcagcttcaccttcgaac 1671

                                                                        
Query: 478  tggaaactctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatg 537
            || |||||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1670 tgaaaactctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatg 1611

                                                                        
Query: 538  ggtaaggtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtg 597
            | | ||| ||||| ||||| ||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 1610 gatgaggcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtg 1551

                       
Query: 598  atgaatcttct 608
            || ||||||||
Sbjct: 1550 ataaatcttct 1540
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>dbj|AK059105.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D06, full
            insert sequence
          Length = 1485

 Score =  260 bits (131), Expect = 5e-66
 Identities = 266/311 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  cgctcgagatacaacggggtctgcatttctatgagccgagatatcgcccttcggaacgca 357
            ||||| |||||||  | |||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 1196 cgctccagatacagtgaggtctgcatttctatgagacgggatatcgccctacggaatgca 1137

                                                                        
Query: 358  aacatctcttcttgaccagacagcattgacactagacctttagtagagggtcctacacca 417
            |||||||||||||| |||||||  |||| |||||| ||| ||| ||| ||  || |||||
Sbjct: 1136 aacatctcttcttggccagacaaaattgccactaggcctgtaggagaaggcgctgcacca 1077

                                                                        
Query: 418  acattgccttctgcggaaacatccctccttaactttgacccttccgcttcagtttcaaac 477
            ||||| ||||||||  ||||||||||||| | ||||| |||||| ||||||  ||| |||
Sbjct: 1076 acattaccttctgctaaaacatccctcctaagctttgccccttcagcttcaccttcgaac 1017

                                                                        
Query: 478  tggaaactctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatg 537
            || |||||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||
Sbjct: 1016 tgaaaactctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatg 957

                                                                        
Query: 538  ggtaaggtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtg 597
            | | ||| ||||| ||||| ||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 956  gatgaggcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtg 897

                       
Query: 598  atgaatcttct 608
            || ||||||||
Sbjct: 896  ataaatcttct 886
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>gb|AY107030.1| Zea mays PCO111338 mRNA sequence
          Length = 488

 Score =  214 bits (108), Expect = 3e-52
 Identities = 210/244 (86%)
 Strand = Plus / Minus

                                                                       
Query: 295 acacgctcgagatacaacggggtctgcatttctatgagccgagatatcgcccttcggaac 354
           |||||||| ||||||| |||||||||||| || || ||||| ||||||||||| ||||||
Sbjct: 265 acacgctccagatacagcggggtctgcatctcgataagccgtgatatcgccctgcggaac 206

                                                                       
Query: 355 gcaaacatctcttcttgaccagacagcattgacactagacctttagtagagggtcctaca 414
           |||||||||||||||||||||||||  || | ||| || ||  ||||||| ||||||   
Sbjct: 205 gcaaacatctcttcttgaccagacaatatcgccacaaggccggtagtagatggtcctgag 146

                                                                       
Query: 415 ccaacattgccttctgcggaaacatccctccttaactttgacccttccgcttcagtttca 474
           ||| |||||||||| ||  ||||||||||||| | ||||| |||||| |  || ||||||
Sbjct: 145 ccagcattgccttccgccaaaacatccctcctcagctttgtcccttcggactcggtttca 86

                                                                       
Query: 475 aactggaaactctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatca 534
           ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| ||||
Sbjct: 85  aactgaaaactctctaaatcaaaaagaggtccttcctcagttccttgaaaaagatcatca 26

               
Query: 535 atgg 538
           ||||
Sbjct: 25  atgg 22
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                            
Query: 484      ctctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatgggtaag 543
                ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||| | ||
Sbjct: 35566286 ctctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatggatgag 35566345

                                                                            
Query: 544      gtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtgatgaat 603
                | ||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 35566346 gcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtgataaat 35566405

                     
Query: 604      cttct 608
                |||||
Sbjct: 35566406 cttct 35566410



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 120/144 (83%)
 Strand = Plus / Plus

                                                                            
Query: 342      cgcccttcggaacgcaaacatctcttcttgaccagacagcattgacactagacctttagt 401
                |||||| ||||| ||||||||||||||||| |||||||  |||| |||||| ||| ||| 
Sbjct: 35566016 cgccctacggaatgcaaacatctcttcttggccagacaaaattgccactaggcctgtagg 35566075

                                                                            
Query: 402      agagggtcctacaccaacattgccttctgcggaaacatccctccttaactttgacccttc 461
                ||| ||  || |||||||||| ||||||||  ||||||||||||| | ||||| ||||||
Sbjct: 35566076 agaaggcgctgcaccaacattaccttctgctaaaacatccctcctaagctttgccccttc 35566135

                                        
Query: 462      cgcttcagtttcaaactggaaact 485
                 ||||||  ||| ||||| |||||
Sbjct: 35566136 agcttcaccttcgaactgaaaact 35566159



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 298      cgctcgagatacaacggggtctgcatttctatgagccgagatatc 342
                ||||| |||||||  | |||||||||||||||||| || ||||||
Sbjct: 35565100 cgctccagatacagtgaggtctgcatttctatgagacgggatatc 35565144
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                            
Query: 484      ctctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatgggtaag 543
                ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||| | ||
Sbjct: 35656358 ctctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatggatgag 35656417

                                                                            
Query: 544      gtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtgatgaat 603
                | ||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 35656418 gcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtgataaat 35656477

                     
Query: 604      cttct 608
                |||||
Sbjct: 35656478 cttct 35656482



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 120/144 (83%)
 Strand = Plus / Plus

                                                                            
Query: 342      cgcccttcggaacgcaaacatctcttcttgaccagacagcattgacactagacctttagt 401
                |||||| ||||| ||||||||||||||||| |||||||  |||| |||||| ||| ||| 
Sbjct: 35656088 cgccctacggaatgcaaacatctcttcttggccagacaaaattgccactaggcctgtagg 35656147

                                                                            
Query: 402      agagggtcctacaccaacattgccttctgcggaaacatccctccttaactttgacccttc 461
                ||| ||  || |||||||||| ||||||||  ||||||||||||| | ||||| ||||||
Sbjct: 35656148 agaaggcgctgcaccaacattaccttctgctaaaacatccctcctaagctttgccccttc 35656207

                                        
Query: 462      cgcttcagtttcaaactggaaact 485
                 ||||||  ||| ||||| |||||
Sbjct: 35656208 agcttcaccttcgaactgaaaact 35656231



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                             
Query: 298      cgctcgagatacaacggggtctgcatttctatgagccgagatatc 342
                ||||| |||||||  | |||||||||||||||||| || ||||||
Sbjct: 35655172 cgctccagatacagtgaggtctgcatttctatgagacgggatatc 35655216
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>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete
             sequence
          Length = 145290

 Score =  129 bits (65), Expect = 1e-26
 Identities = 110/125 (88%)
 Strand = Plus / Plus

                                                                         
Query: 484   ctctctaaatcaaaaagaggcccttcctcagttccttgaaacagattatcaatgggtaag 543
             ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||||| | ||
Sbjct: 99249 ctctccaagtcaaaaagaggtccttcatcagttccttgaaaaagatcatcaatggatgag 99308

                                                                         
Query: 544   gtagctaaacatataaggcggcagtgatgattgtacatctcatcaataagggtgatgaat 603
             | ||||| ||||| ||| ||||||||||||||||| | |||||||||||||||||| |||
Sbjct: 99309 gcagctagacatacaagacggcagtgatgattgtagagctcatcaataagggtgataaat 99368

                  
Query: 604   cttct 608
             |||||
Sbjct: 99369 cttct 99373



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 120/144 (83%)
 Strand = Plus / Plus

                                                                         
Query: 342   cgcccttcggaacgcaaacatctcttcttgaccagacagcattgacactagacctttagt 401
             |||||| ||||| ||||||||||||||||| |||||||  |||| |||||| ||| ||| 
Sbjct: 98979 cgccctacggaatgcaaacatctcttcttggccagacaaaattgccactaggcctgtagg 99038

                                                                         
Query: 402   agagggtcctacaccaacattgccttctgcggaaacatccctccttaactttgacccttc 461
             ||| ||  || |||||||||| ||||||||  ||||||||||||| | ||||| ||||||
Sbjct: 99039 agaaggcgctgcaccaacattaccttctgctaaaacatccctcctaagctttgccccttc 99098

                                     
Query: 462   cgcttcagtttcaaactggaaact 485
              ||||||  ||| ||||| |||||
Sbjct: 99099 agcttcaccttcgaactgaaaact 99122



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 298   cgctcgagatacaacggggtctgcatttctatgagccgagatatc 342
             ||||| |||||||  | |||||||||||||||||| || ||||||
Sbjct: 98063 cgctccagatacagtgaggtctgcatttctatgagacgggatatc 98107
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>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete
             sequence
          Length = 193184

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 471   ttcaaactggaaactctctaaatca 495
             |||||||||||||||||||||||||
Sbjct: 48249 ttcaaactggaaactctctaaatca 48273
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>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence
          Length = 208705

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 471   ttcaaactggaaactctctaaatca 495
             |||||||||||||||||||||||||
Sbjct: 25892 ttcaaactggaaactctctaaatca 25868
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>ref|NM_146982.1| Mus musculus olfactory receptor 1257 (Olfr1257), mRNA
          Length = 930

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 529 ttatcaatgggtaaggtagcta 550
           ||||||||||||||||||||||
Sbjct: 800 ttatcaatgggtaaggtagcta 779
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>gb|AY318459.1| Mus musculus olfactory receptor Olfr1257 (Olfr1257) gene, complete
           cds
          Length = 930

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 529 ttatcaatgggtaaggtagcta 550
           ||||||||||||||||||||||
Sbjct: 800 ttatcaatgggtaaggtagcta 779
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>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence
          Length = 212563

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 529   ttatcaatgggtaaggtagcta 550
             ||||||||||||||||||||||
Sbjct: 95264 ttatcaatgggtaaggtagcta 95285
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>ref|NM_001000572.1| Rattus norvegicus olfactory receptor 722 (predicted)
           (Olr722_predicted), mRNA
          Length = 930

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 529 ttatcaatgggtaaggtagcta 550
           ||||||||||||||||||||||
Sbjct: 800 ttatcaatgggtaaggtagcta 779
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>gb|AY073106.1| Mus musculus olfactory receptor MOR232-1 gene, complete cds
          Length = 930

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 529 ttatcaatgggtaaggtagcta 550
           ||||||||||||||||||||||
Sbjct: 800 ttatcaatgggtaaggtagcta 779
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>emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chromosome 2, complete
             sequence
          Length = 131582

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 529   ttatcaatgggtaaggtagcta 550
             ||||||||||||||||||||||
Sbjct: 30622 ttatcaatgggtaaggtagcta 30601
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 519     ttgaaacagattatcaatggg 539
               |||||||||||||||||||||
Sbjct: 1881204 ttgaaacagattatcaatggg 1881224
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>gb|AY256959.1| Streptococcus agalactiae 1,6-alpha-glucosidase (dexB) gene, partial
            cds; UDP glucose 4-epimerase (galE), DNA-binding
            activator protein (rheB), sensor histidine kinase (rheA),
            and L-malate permease (malP) genes, complete cds; and
            S-malate:NAD+ oxidoreductase (malO) gene, partial cds
          Length = 6131

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 519  ttgaaacagattatcaatggg 539
            |||||||||||||||||||||
Sbjct: 2656 ttgaaacagattatcaatggg 2636
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>gb|AE014278.1| Streptococcus agalactiae 2603V/R section 88 of 100 of the complete
             genome
          Length = 20610

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 519   ttgaaacagattatcaatggg 539
             |||||||||||||||||||||
Sbjct: 10747 ttgaaacagattatcaatggg 10767
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>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 164     gattatttttacaggaacgaa 184
               |||||||||||||||||||||
Sbjct: 2008602 gattatttttacaggaacgaa 2008582
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>emb|AL766854.1|SAG766854 Streptococcus agalactiae NEM316 complete genome, segment 12
          Length = 98050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 519   ttgaaacagattatcaatggg 539
             |||||||||||||||||||||
Sbjct: 59316 ttgaaacagattatcaatggg 59336
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>gb|AC154869.3| Monodelphis domestica, clone XX-216E9, complete sequence
          Length = 159803

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 81    acttgtgttacatacatatac 101
             |||||||||||||||||||||
Sbjct: 38098 acttgtgttacatacatatac 38078
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>gb|AC151843.3| Mus musculus BAC clone RP23-88K14 from chromosome 10, complete sequence
          Length = 268516

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   tgaagcccagaagaatggac 287
             ||||||||||||||||||||
Sbjct: 66469 tgaagcccagaagaatggac 66488
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>gb|AC124573.4| Mus musculus BAC clone RP23-159F13 from 10, complete sequence
          Length = 191206

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    tgaagcccagaagaatggac 287
              ||||||||||||||||||||
Sbjct: 121923 tgaagcccagaagaatggac 121942
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>ref|XM_724243.1| Plasmodium yoelii yoelii str. 17XNL m1-family aminopeptidase
            (PY01557) partial mRNA
          Length = 3195

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 589  ataagggtgatgaatcttct 608
            ||||||||||||||||||||
Sbjct: 1603 ataagggtgatgaatcttct 1584
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>gb|AC073095.4| Homo sapiens BAC clone RP11-384A20 from 7, complete sequence
          Length = 70276

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 443  tccttaactttgacccttcc 462
            ||||||||||||||||||||
Sbjct: 7591 tccttaactttgacccttcc 7610
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>ref|XM_739947.1| Plasmodium chabaudi chabaudi m1-family aminopeptidase (PC001408.02.0)
            partial mRNA
          Length = 2688

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 589  ataagggtgatgaatcttct 608
            ||||||||||||||||||||
Sbjct: 1096 ataagggtgatgaatcttct 1077
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>gb|AC158585.3| Mus musculus chromosome 5, clone RP24-250F5, complete sequence
          Length = 158066

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 258  ctgctgttgttgaagcccag 277
            ||||||||||||||||||||
Sbjct: 6031 ctgctgttgttgaagcccag 6012
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>gb|AC120128.17| Mus musculus chromosome 5, clone RP23-181F22, complete sequence
          Length = 213246

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   ctgctgttgttgaagcccag 277
             ||||||||||||||||||||
Sbjct: 58008 ctgctgttgttgaagcccag 58027
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>dbj|AK125720.1| Homo sapiens cDNA FLJ43732 fis, clone TESTI1000491
          Length = 3097

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 474 aaactggaaactctctaaat 493
           ||||||||||||||||||||
Sbjct: 656 aaactggaaactctctaaat 637
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>gb|AC073370.7| Homo sapiens chromosome 10 clone RP11-472G21, complete sequence
          Length = 178253

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 507    ttcctcagttccttgaaaca 526
              ||||||||||||||||||||
Sbjct: 115488 ttcctcagttccttgaaaca 115507
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>gb|AC137894.5| Homo sapiens chromosome 11, clone RP13-46H24, complete sequence
          Length = 165000

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   aaactggaaactctctaaat 493
             ||||||||||||||||||||
Sbjct: 97534 aaactggaaactctctaaat 97515
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>gb|AC009299.5| Homo sapiens BAC clone RP11-26B22 from 2, complete sequence
          Length = 169697

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 497   aaagaggcccttcctcagtt 516
             ||||||||||||||||||||
Sbjct: 42310 aaagaggcccttcctcagtt 42329
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>gb|AC119998.13| Mus musculus chromosome 17, clone RP24-128A6, complete sequence
          Length = 172124

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   gctgttgttgaagcccagaa 279
             ||||||||||||||||||||
Sbjct: 85633 gctgttgttgaagcccagaa 85652
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>gb|AC127581.4| Mus musculus BAC clone RP24-88B13 from 9, complete sequence
          Length = 204684

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    actgagagacagtgctctgt 237
              ||||||||||||||||||||
Sbjct: 136929 actgagagacagtgctctgt 136948
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>gb|AC139108.3| Mus musculus BAC clone RP23-93M1 from 9, complete sequence
          Length = 269739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    actgagagacagtgctctgt 237
              ||||||||||||||||||||
Sbjct: 265277 actgagagacagtgctctgt 265296
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>gb|U73630.1|U73630 Human Chromosome 11 Overlapping Cosmids cSRL125c1 and cSRL135f4,
            complete sequence
          Length = 43105

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 474  aaactggaaactctctaaat 493
            ||||||||||||||||||||
Sbjct: 7261 aaactggaaactctctaaat 7242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,354,893
Number of Sequences: 3902068
Number of extensions: 5354893
Number of successful extensions: 97000
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96894
Number of HSP's gapped (non-prelim): 105
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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