ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
2gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 78 3e-11
3gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase... 78 3e-11
4gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds 78 3e-11
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
6dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 3e-11
7gb|AY106111.1| Zea mays PCO074668 mRNA sequence 58 2e-05
8gb|DQ116388.1| Oryza sativa (japonica cultivar-group) hexokinase... 54 4e-04
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
11gb|AY884165.1| Oryza sativa (japonica cultivar-group) hexokinase... 54 4e-04
12dbj|AK065656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
13gb|AY125979.1| Zea mays hexokinase mRNA, complete cds 52 0.001
14gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome... 46 0.091
15gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, comple... 44 0.36
16ref|XM_445690.1| Candida glabrata CBS138, CAGL0D06556g partial mRNA 42 1.4
17emb|X97560.1|SC32KBF S.cerevisiae 32kb DNA fragment of chromosom... 42 1.4
18emb|CR380950.1| Candida glabrata strain CBS138 chromosome D comp... 42 1.4
19gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Can... 42 1.4
20emb|X03606.1|SCAPSG Yeast APS gene for cytoplasmatic aspartyl-tR... 42 1.4
21emb|Z73123.1|SCYLL018C S.cerevisiae chromosome XII reading frame... 42 1.4
22emb|X06665.1|SCATS Yeast gene for aspartyl-tRNA synthase 42 1.4
23gb|DQ333129.1| Synthetic construct Saccharomyces cerevisiae clon... 42 1.4
24gb|AC157899.5| Mus musculus chromosome 15, clone RP23-98F15, com... 40 5.6
25ref|XM_417881.1| PREDICTED: Gallus gallus similar to hypothetica... 40 5.6
26gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, co... 40 5.6
27emb|AL451006.6| Human DNA sequence from clone RP11-216M14 on chr... 40 5.6
28emb|AL355474.15| Human DNA sequence from clone RP11-55C5 on chro... 40 5.6
29emb|AL356109.8| Human DNA sequence from clone RP11-373A10 on chr... 40 5.6
30emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chr... 40 5.6
31emb|AL139190.9| Human DNA sequence from clone RP11-34M7 on chrom... 40 5.6
32emb|AL138679.11| Human DNA sequence from clone RP11-10M8 on chro... 40 5.6
33gb|AC117402.9| Homo sapiens 3 BAC RP11-553A10 (Roswell Park Canc... 40 5.6
34emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 5.6
35emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 5.6
36emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 5.6
37gb|AC025038.6| Homo sapiens chromosome 10 clone RP11-443O13, com... 40 5.6
38gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cance... 40 5.6
39emb|CR391175.1| Gallus gallus finished cDNA, clone ChEST699c2 40 5.6
40gb|AE000657.1| Aquifex aeolicus VF5, complete genome 40 5.6 
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03,
             complete sequence
          Length = 101218

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                         
Query: 212   tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
             |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 93098 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 93040

                
Query: 272   gag 274
             |||
Sbjct: 93039 gag 93037
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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0075A10, complete sequence
          Length = 171101

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                         
Query: 212   tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
             |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 55746 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 55688

                
Query: 272   gag 274
             |||
Sbjct: 55687 gag 55685
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>gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase 5 (HXK5) mRNA,
            complete cds
          Length = 2058

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                        
Query: 212  tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
            |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 1880 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 1822

               
Query: 272  gag 274
            |||
Sbjct: 1821 gag 1819
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>gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds
          Length = 1965

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                        
Query: 212  tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
            |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 1761 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 1703

               
Query: 272  gag 274
            |||
Sbjct: 1702 gag 1700
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                            
Query: 212      tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
                |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 25821804 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 25821746

                   
Query: 272      gag 274
                |||
Sbjct: 25821745 gag 25821743
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>dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F14, full
            insert sequence
          Length = 2033

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 58/63 (92%), Gaps = 1/63 (1%)
 Strand = Plus / Minus

                                                                        
Query: 212  tttatgccattagataaacctccagactctctggcgctatactagctacatcccgctgca 271
            |||||||||||||| ||||||||| ||||  ||||||||||||||||| |||||||||||
Sbjct: 1870 tttatgccattaga-aaacctccaaactcattggcgctatactagctatatcccgctgca 1812

               
Query: 272  gag 274
            |||
Sbjct: 1811 gag 1809
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>gb|AY106111.1| Zea mays PCO074668 mRNA sequence
          Length = 1962

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 54/61 (88%), Gaps = 1/61 (1%)
 Strand = Plus / Minus

                                                                        
Query: 216  tgccattagataaacctccagactctctggcgctatactagctacatcccgctgcagagc 275
            ||||||||||||| |||||| ||||  |||| ||||||||||||||||||  ||||||||
Sbjct: 1826 tgccattagataa-cctccaaactcattggctctatactagctacatcccaatgcagagc 1768

             
Query: 276  c 276
            |
Sbjct: 1767 c 1767
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>gb|DQ116388.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
            complete cds
          Length = 2070

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 237  actctctggcgctatactagctacatcccgctgca 271
            ||||| |||||| ||||||||||||||||||||||
Sbjct: 1852 actctttggcgccatactagctacatcccgctgca 1818
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 237      actctctggcgctatactagctacatcccgctgca 271
                ||||| |||||| ||||||||||||||||||||||
Sbjct: 31003158 actctttggcgccatactagctacatcccgctgca 31003192
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>dbj|AP003768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0439E07
          Length = 176486

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 237   actctctggcgctatactagctacatcccgctgca 271
             ||||| |||||| ||||||||||||||||||||||
Sbjct: 60137 actctttggcgccatactagctacatcccgctgca 60171
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>gb|AY884165.1| Oryza sativa (japonica cultivar-group) hexokinase 2 (HXK2) mRNA,
            complete cds
          Length = 1955

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 237  actctctggcgctatactagctacatcccgctgca 271
            ||||| |||||| ||||||||||||||||||||||
Sbjct: 1729 actctttggcgccatactagctacatcccgctgca 1695
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>dbj|AK065656.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039E17, full
            insert sequence
          Length = 2156

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 237  actctctggcgctatactagctacatcccgctgca 271
            ||||| |||||| ||||||||||||||||||||||
Sbjct: 1882 actctttggcgccatactagctacatcccgctgca 1848
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>gb|AY125979.1| Zea mays hexokinase mRNA, complete cds
          Length = 1893

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 45/50 (90%), Gaps = 1/50 (2%)
 Strand = Plus / Minus

                                                              
Query: 216  tgccattagataaacctccagactctctggcgctatactagctacatccc 265
            ||||||||||||| |||||| ||||  |||| ||||||||||||||||||
Sbjct: 1723 tgccattagataa-cctccaaactcattggctctatactagctacatccc 1675
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>gb|AC160113.2| Mus musculus BAC clone RP24-84O12 from chromosome 9, complete sequence
          Length = 223852

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 188    ccatatgttcctgccactgaaac 210
              |||||||||||||||||||||||
Sbjct: 156786 ccatatgttcctgccactgaaac 156808
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>gb|AC133523.3| Mus musculus BAC clone RP23-34E20 from 19, complete sequence
          Length = 250866

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 92     aaaaaaggattaacaaaatgtt 113
              ||||||||||||||||||||||
Sbjct: 177453 aaaaaaggattaacaaaatgtt 177474
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>ref|XM_445690.1| Candida glabrata CBS138, CAGL0D06556g partial mRNA
          Length = 1662

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 acaacaccagacaacaaggtg 141
           |||||||||||||||||||||
Sbjct: 332 acaacaccagacaacaaggtg 352
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>emb|X97560.1|SC32KBF S.cerevisiae 32kb DNA fragment of chromosome XII, left arm
          Length = 32088

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 121   acaacaccagacaacaaggtg 141
             |||||||||||||||||||||
Sbjct: 20364 acaacaccagacaacaaggtg 20344
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>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence
          Length = 651701

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 121    acaacaccagacaacaaggtg 141
              |||||||||||||||||||||
Sbjct: 624101 acaacaccagacaacaaggtg 624121
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>gb|AC090059.9| Homo sapiens 12 BAC RP11-604C20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 130125

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     ggaagagaagatacaaaaaag 98
              |||||||||||||||||||||
Sbjct: 121687 ggaagagaagatacaaaaaag 121707
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>emb|X03606.1|SCAPSG Yeast APS gene for cytoplasmatic aspartyl-tRNA synthetase (AspRS)
          Length = 3836

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 121  acaacaccagacaacaaggtg 141
            |||||||||||||||||||||
Sbjct: 1965 acaacaccagacaacaaggtg 1985
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>emb|Z73123.1|SCYLL018C S.cerevisiae chromosome XII reading frame ORF YLL018c
          Length = 6061

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 121  acaacaccagacaacaaggtg 141
            |||||||||||||||||||||
Sbjct: 5057 acaacaccagacaacaaggtg 5037
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>emb|X06665.1|SCATS Yeast gene for aspartyl-tRNA synthase
          Length = 2741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 acaacaccagacaacaaggtg 141
           |||||||||||||||||||||
Sbjct: 794 acaacaccagacaacaaggtg 814
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>gb|DQ333129.1| Synthetic construct Saccharomyces cerevisiae clone FLH004552.01X
           DPS1 gene, complete sequence
          Length = 1674

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 121 acaacaccagacaacaaggtg 141
           |||||||||||||||||||||
Sbjct: 347 acaacaccagacaacaaggtg 367
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>gb|AC157899.5| Mus musculus chromosome 15, clone RP23-98F15, complete sequence
          Length = 199372

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 78    ggaagagaagatacaaaaaaggat 101
             |||||||||||||||||| |||||
Sbjct: 51270 ggaagagaagatacaaaataggat 51247
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>ref|XM_417881.1| PREDICTED: Gallus gallus similar to hypothetical protein AN5649.2
            (LOC419741), mRNA
          Length = 2365

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 269  gcagagccacaggagagtgt 288
            ||||||||||||||||||||
Sbjct: 1624 gcagagccacaggagagtgt 1643
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>gb|AC105330.8| Mus musculus chromosome 15, clone RP23-281C10, complete sequence
          Length = 206675

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 78     ggaagagaagatacaaaaaaggat 101
              |||||||||||||||||| |||||
Sbjct: 119352 ggaagagaagatacaaaataggat 119329
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>emb|AL451006.6| Human DNA sequence from clone RP11-216M14 on chromosome 1, complete
             sequence
          Length = 93119

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   tgcagagccacaggagagtg 287
             ||||||||||||||||||||
Sbjct: 69337 tgcagagccacaggagagtg 69356
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>emb|AL355474.15| Human DNA sequence from clone RP11-55C5 on chromosome 10 Contains a
             novel gene and the 5' end of the FAM13C1 gene for family
             with sequence similarity 13 member C1, complete sequence
          Length = 120194

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   ccattagataaacctccaga 237
             ||||||||||||||||||||
Sbjct: 40806 ccattagataaacctccaga 40825
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>emb|AL356109.8| Human DNA sequence from clone RP11-373A10 on chromosome 6 Contains the
             TCF21 gene for transcription factor 21 and two predicted
             CpG islands, complete sequence
          Length = 25186

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    aaaaaaggattaacaaaatg 111
             ||||||||||||||||||||
Sbjct: 14026 aaaaaaggattaacaaaatg 14007
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>emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chromosome 13
          Contains part of the TRPC4 gene transient receptor
          potential cation channel, subfamily C, member 4,
          complete sequence
          Length = 171184

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 70 ctttattgggaagagaagat 89
          ||||||||||||||||||||
Sbjct: 73 ctttattgggaagagaagat 92
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>emb|AL139190.9| Human DNA sequence from clone RP11-34M7 on chromosome 6, complete
             sequence
          Length = 48119

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   acaccagacaacaaggtgaa 143
             ||||||||||||||||||||
Sbjct: 38913 acaccagacaacaaggtgaa 38894
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>emb|AL138679.11| Human DNA sequence from clone RP11-10M8 on chromosome 13 Contains the 5'
              end of the gene for osteoblast specific factor 2 (fasciclin
              I-like) (OSF-2) and the 3' end of the TRPC4 gene for
              transient receptor potential cation channel, subfamily C,
              member 4, complete sequence
          Length = 104025

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ctttattgggaagagaagat 89
              ||||||||||||||||||||
Sbjct: 103998 ctttattgggaagagaagat 104017
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>gb|AC117402.9| Homo sapiens 3 BAC RP11-553A10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166999

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 91    caaaaaaggattaacaaaat 110
             ||||||||||||||||||||
Sbjct: 95044 caaaaaaggattaacaaaat 95063
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     aaaaaaggattaacaaaatgttat 115
              ||||||||||||||||||| ||||
Sbjct: 817858 aaaaaaggattaacaaaatattat 817881
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     aaaaaaggattaacaaaatgttat 115
              ||||||||||||||||||| ||||
Sbjct: 813766 aaaaaaggattaacaaaatattat 813789
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     aaaaaaggattaacaaaatgttat 115
              ||||||||||||||||||| ||||
Sbjct: 837983 aaaaaaggattaacaaaatattat 838006
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>gb|AC025038.6| Homo sapiens chromosome 10 clone RP11-443O13, complete sequence
          Length = 163132

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   ccattagataaacctccaga 237
             ||||||||||||||||||||
Sbjct: 39619 ccattagataaacctccaga 39600
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>gb|AC153579.10| Mus musculus 6 BAC RP23-21F2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 33     taaaaagatggttaaattgg 52
              ||||||||||||||||||||
Sbjct: 163213 taaaaagatggttaaattgg 163232
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>emb|CR391175.1| Gallus gallus finished cDNA, clone ChEST699c2
          Length = 1225

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 269 gcagagccacaggagagtgt 288
           ||||||||||||||||||||
Sbjct: 479 gcagagccacaggagagtgt 498
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 224     gataaacctccagactctct 243
               ||||||||||||||||||||
Sbjct: 1390290 gataaacctccagactctct 1390271


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,477,132
Number of Sequences: 3902068
Number of extensions: 4477132
Number of successful extensions: 109760
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 109614
Number of HSP's gapped (non-prelim): 140
length of query: 418
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 396
effective length of database: 17,147,199,772
effective search space: 6790291109712
effective search space used: 6790291109712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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