| Clone Name | rbags19f01 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... | 28 | 5.7 | 2 | STK23_MOUSE (Q9Z0G2) Serine/threonine-protein kinase 23 (EC 2.7.... | 27 | 9.7 | 3 | PDP2_HUMAN (Q9P2J9) [Pyruvate dehydrogenase [lipoamide]]-phospha... | 27 | 9.7 | 4 | STK23_HUMAN (Q9UPE1) Serine/threonine-protein kinase 23 (EC 2.7.... | 27 | 9.7 |
|---|
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/25 (40%), Positives = 11/25 (44%) Frame = -1 Query: 83 IHXPVCNSLATXGRHSVYCVVLCCC 9 +H P CN G H V C C C Sbjct: 389 VHGPHCNVTCPAGLHGVDCAQACSC 413
>STK23_MOUSE (Q9Z0G2) Serine/threonine-protein kinase 23 (EC 2.7.11.1)| (Muscle-specific serine kinase 1) (MSSK-1) Length = 565 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/42 (26%), Positives = 19/42 (45%) Frame = -1 Query: 158 LHSCRTLSIAAHERLFWLIRSFVSTIHXPVCNSLATXGRHSV 33 +H C L + H+ L W+I+S + P S+ H + Sbjct: 157 VHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGL 198
>PDP2_HUMAN (Q9P2J9) [Pyruvate dehydrogenase [lipoamide]]-phosphatase 2,| mitochondrial precursor (EC 3.1.3.43) (PDP 2) (Pyruvate dehydrogenase phosphatase, catalytic subunit 2) (PDPC 2) Length = 529 Score = 27.3 bits (59), Expect = 9.7 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -1 Query: 266 ATAGDHXXXHVLGQQEFAGLWHCVGLTR 183 A AGD +LG QE G+W C+ LTR Sbjct: 282 ANAGDCRA--ILGVQEDNGMWSCLPLTR 307
>STK23_HUMAN (Q9UPE1) Serine/threonine-protein kinase 23 (EC 2.7.11.1)| (Muscle-specific serine kinase 1) (MSSK-1) Length = 533 Score = 27.3 bits (59), Expect = 9.7 Identities = 11/42 (26%), Positives = 19/42 (45%) Frame = -1 Query: 158 LHSCRTLSIAAHERLFWLIRSFVSTIHXPVCNSLATXGRHSV 33 +H C L + H+ L W+I+S + P S+ H + Sbjct: 158 VHVCMVLEVLGHQLLKWIIKSNYQGLPVPCVKSIVRQVLHGL 199 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,869,631 Number of Sequences: 219361 Number of extensions: 488935 Number of successful extensions: 1020 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1003 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1018 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)