ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19e21 |
|---|---|
| Clone Library Name | barley_pub |
>CFI_IPOPU (O22604) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 241 Score = 65.1 bits (157), Expect = 2e-10 Identities = 39/128 (30%), Positives = 59/128 (46%), Gaps = 2/128 (1%) Frame = -2 Query: 628 AKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDAL 455 AKTL L G G + I +KF A+GVYL+ D W GKS +L + FF + Sbjct: 27 AKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSVEELTDSVQFFRDI 86 Query: 454 VSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSKYF 275 V+ P EK+ R+ +I + G QY ++ + +K +D F + F Sbjct: 87 VTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGMYGDAESKAIDKFNDVFSDQMF 146 Query: 274 RPGSIVTF 251 PG+ + F Sbjct: 147 PPGASIFF 154
>CFI_ELAUM (O65333) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 256 Score = 65.1 bits (157), Expect = 2e-10 Identities = 45/134 (33%), Positives = 62/134 (46%), Gaps = 5/134 (3%) Frame = -2 Query: 649 FPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QL 485 FP E+ +KTL L G GV IEI IKF A+GVYL+ + WKGKS +L Sbjct: 18 FPPEVKPPGSSKTLFLGGAGVRGIEIQGKFIKFTAIGVYLEDNAVPSLAVKWKGKSAQEL 77 Query: 484 MEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEK 305 E FF +V+ P+EK RV I + G QY ++ + EK Sbjct: 78 TESVEFFRDIVTGPMEKFTRVTTILPLTGQQYSEKVSENCVAAWKSLGIYSDAEAKAIEK 137 Query: 304 VSDFFQSKYFRPGS 263 + F+ + F P + Sbjct: 138 FIEIFKDQTFPPAA 151
>CFIA_PETHY (P11650) Chalcone--flavonone isomerase A (EC 5.5.1.6) (Chalcone| isomerase A) Length = 241 Score = 62.0 bits (149), Expect = 2e-09 Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 2/136 (1%) Frame = -2 Query: 652 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 479 P TL L G G +EI +KF A+GVYL+ + WKGK+ +L + Sbjct: 19 PTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTD 78 Query: 478 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVS 299 FF +V+ P EK RV +I + G QY ++ + EK Sbjct: 79 SVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFL 138 Query: 298 DFFQSKYFRPGSIVTF 251 D F+S+ F PG+ + F Sbjct: 139 DVFRSETFPPGASIMF 154
>CFI_DIACA (Q43754) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 56.2 bits (134), Expect = 8e-08 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 5/138 (3%) Frame = -2 Query: 649 FPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QL 485 FP E+ KT L G GV +EI IKF A+ VY++ D WKGK+ +L Sbjct: 14 FPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADEL 73 Query: 484 MEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEK 305 + FF +V+ P EK +V +I + G QY ++ + +K Sbjct: 74 TDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQK 133 Query: 304 VSDFFQSKYFRPGSIVTF 251 F++ PG+ + F Sbjct: 134 FLQVFKNVSNPPGASILF 151
>CFIB_PETHY (P11651) Chalcone--flavonone isomerase B (EC 5.5.1.6) (Chalcone| isomerase B) Length = 220 Score = 55.8 bits (133), Expect = 1e-07 Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Frame = -2 Query: 652 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 479 P + A KTL L G G +++ +KF +GVYL+ WKGKS +L+ Sbjct: 19 PTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQFLAPKWKGKSAEELIH 78 Query: 478 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVS 299 FF +V+ P EK RV I + G Q+ ++ + EK Sbjct: 79 SVDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKATGTYSDAGSRAIEKFL 138 Query: 298 DFFQSKYFRPGSIVTF 251 + +S+ F PG+ + F Sbjct: 139 NVVKSETFLPGASILF 154
>CFI1_MEDSA (P28012) Chalcone--flavonone isomerase 1 (EC 5.5.1.6) (Chalcone| isomerase 1) Length = 222 Score = 55.8 bits (133), Expect = 1e-07 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Frame = -2 Query: 625 KTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALV 452 K+ L G G + I IKF A+GVYL+ WKGKS +L+E F+ ++ Sbjct: 26 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDII 85 Query: 451 SAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSKYFR 272 S P EK++R I+E+ G +Y ++ + L +K ++ F+ F Sbjct: 86 SGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFP 145 Query: 271 PGSIVTF 251 PG+ V + Sbjct: 146 PGASVFY 152
>CFI2_MEDSA (P28013) Chalcone--flavonone isomerase 2 (EC 5.5.1.6) (Chalcone| isomerase 2) (Fragment) Length = 197 Score = 55.8 bits (133), Expect = 1e-07 Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%) Frame = -2 Query: 625 KTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALV 452 K+ L G G + I IKF A+GVYL+ WKGKS +L+E F+ ++ Sbjct: 1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDII 60 Query: 451 SAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSKYFR 272 S P EK++R I+E+ G +Y ++ + L +K ++ F+ F Sbjct: 61 SGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFP 120 Query: 271 PGSIVTF 251 PG+ V + Sbjct: 121 PGASVFY 127
>CFI_MAIZE (Q08704) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 231 Score = 55.8 bits (133), Expect = 1e-07 Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 3/140 (2%) Frame = -2 Query: 652 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 479 P R A + L G GV +EI IKF A+GVYL+ + W GK+ +L Sbjct: 15 PVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELAS 74 Query: 478 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVS 299 D AFF +V+ EK RV +I + G QY ++ + EK Sbjct: 75 DAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFR 134 Query: 298 DFFQSKYFRPG-SIVTFHFP 242 + F+ + F PG SI+ H P Sbjct: 135 EVFKPETFAPGRSILFTHSP 154
>CFI_PUELO (Q43056) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 224 Score = 54.7 bits (130), Expect = 2e-07 Identities = 49/194 (25%), Positives = 79/194 (40%), Gaps = 3/194 (1%) Frame = -2 Query: 634 AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGK--SQLMEDEAFFD 461 A +T L G G + I IKF +GVYL+ WKGK +L+E F+ Sbjct: 28 ASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYR 87 Query: 460 ALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSK 281 ++S P EK++R I + G +Y ++ + + EK ++ F++ Sbjct: 88 DIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNV 147 Query: 280 YFRPGSIVTF-HFPXXXXXAPEISFVTEGXXXXXXXXXXXXXXEMIQRWYLGGEAAVSQT 104 F+PG+ V + P VT +++ + GE AVS Sbjct: 148 NFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLET--MIGEHAVSPD 205 Query: 103 TVRSIADGFAAMLS 62 RS+A A+LS Sbjct: 206 LKRSLASRLPAVLS 219
>CFI_VITVI (P51117) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 234 Score = 53.9 bits (128), Expect = 4e-07 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 3/129 (2%) Frame = -2 Query: 619 LSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALVSA 446 L L G GV +EI +KF A+GVYL+ WKGK+ +L + FF +V+ Sbjct: 30 LFLGGAGVRGLEIQGKFVKFTAIGVYLENSAVPTLAVKWKGKTVEELADSVDFFRDVVTG 89 Query: 445 PVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSKYFRPG 266 P EK +V I + G QY ++ + EK ++ + + F PG Sbjct: 90 PFEKFTKVTTILPLTGRQYSDKVSENCVAFWKSVGIYTDAEAKAIEKFNEVLKDETFPPG 149 Query: 265 SIVTF-HFP 242 + + F H P Sbjct: 150 NSILFTHSP 158
>CFI_PHAVU (P14298) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 221 Score = 53.5 bits (127), Expect = 5e-07 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 2/130 (1%) Frame = -2 Query: 634 AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGK--SQLMEDEAFFD 461 A AKT L G G + I IKF A+GVYL+ WKGK +L+ F+ Sbjct: 25 ATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYR 84 Query: 460 ALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSK 281 ++S P EK++R I ++ G++Y ++ + L E+ ++ F+ Sbjct: 85 DIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKV 144 Query: 280 YFRPGSIVTF 251 F PG+ V + Sbjct: 145 NFPPGASVFY 154
>CFI_CALCH (Q42663) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 237 Score = 51.6 bits (122), Expect = 2e-06 Identities = 42/141 (29%), Positives = 64/141 (45%), Gaps = 6/141 (4%) Frame = -2 Query: 655 IPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQG-WKGK-- 494 I FP + +L L G GV +EI +KF +GVYL+ D A+ L KGK Sbjct: 15 IVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLE-DKAIPLLAAKRKGKTV 73 Query: 493 SQLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXX 314 ++L++ FF +V+ P EK +V +I + G QY ++ Sbjct: 74 AELLDSVEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKALGTYTDADGTT 133 Query: 313 XEKVSDFFQSKYFRPGSIVTF 251 EK + F+ + F PGS + F Sbjct: 134 IEKFLEVFKDENFLPGSSILF 154
>CHI_ARALP (Q9LKC3) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 244 Score = 51.2 bits (121), Expect = 3e-06 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 2/136 (1%) Frame = -2 Query: 652 PFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLME 479 P + A + L L G GV ++I + F +GVYL+ + WKGK+ +L E Sbjct: 26 PSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSE 85 Query: 478 DEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKVS 299 FF +V+ EK ++V + + G QY ++ + EK Sbjct: 86 SVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFL 145 Query: 298 DFFQSKYFRPGSIVTF 251 + F+ + F PGS + F Sbjct: 146 EIFKEETFPPGSSILF 161
>CFI_ARATH (P41088) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (TRANSPARENT TESTA 5 protein) Length = 246 Score = 51.2 bits (121), Expect = 3e-06 Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Frame = -2 Query: 655 IPFPREIAGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS--QLM 482 +P + A + L L G GV ++I + F +GVYL+ + WKGK+ +L Sbjct: 27 VPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELT 86 Query: 481 EDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXXEKV 302 E FF +V+ EK ++V + + G QY ++ + EK Sbjct: 87 ESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKF 146 Query: 301 SDFFQSKYFRPGSIVTF 251 + F+ + F PGS + F Sbjct: 147 LEIFKEETFPPGSSILF 163
>CFI_RAPSA (O22651) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 247 Score = 50.1 bits (118), Expect = 6e-06 Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 5/140 (3%) Frame = -2 Query: 655 IPFPREI---AGAKTLSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGKS-- 491 + FP + A + TL L G GV +EI + F +GVYLD W+GK+ Sbjct: 21 VTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSVKWEGKTTE 80 Query: 490 QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQYGVQLESSVRDRLVXXXXXXXXXXXXX 311 +L E FF +V EK ++V + + G QY ++ + Sbjct: 81 ELTESVPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEAKAV 140 Query: 310 EKVSDFFQSKYFRPGSIVTF 251 E+ + F+ + F PG+ + F Sbjct: 141 ERFLEVFKDETFPPGASILF 160
>CFI_PEA (P41089) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) Length = 223 Score = 48.1 bits (113), Expect = 2e-05 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%) Frame = -2 Query: 649 FPREIAGAKT---LSLVGHGVTDIEIHFLQIKFNAVGVYLDVDGAMEHLQGWKGK-SQLM 482 FP + T + L G G + I+ IKF +GVYL+ W+GK +L+ Sbjct: 17 FPAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKLEELL 76 Query: 481 EDEAFFDALVSAPVEKVLRVVVIKEIKGSQY 389 E F+ ++S P EK++R IKE+ G +Y Sbjct: 77 ETLDFYRDIISGPFEKLIRRSKIKELSGPEY 107
>CFI_SOYBN (O81980) Chalcone--flavonone isomerase (EC 5.5.1.6) (Chalcone| isomerase) (Fragment) Length = 172 Score = 41.2 bits (95), Expect = 0.003 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 2/106 (1%) Frame = -2 Query: 562 FNAVGVYLDVDGAMEHLQGWKGKS--QLMEDEAFFDALVSAPVEKVLRVVVIKEIKGSQY 389 + +GVYL+ WKGK+ +L+ F+ ++S P EK++R I + G++Y Sbjct: 1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEY 60 Query: 388 GVQLESSVRDRLVXXXXXXXXXXXXXEKVSDFFQSKYFRPGSIVTF 251 ++ + + EK ++ F++ F PG + + Sbjct: 61 SKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLY 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,784,414 Number of Sequences: 219361 Number of extensions: 813799 Number of successful extensions: 2257 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2221 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2255 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
