>SYL_BACTN (Q8A329) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 944

 Score = 36.6 bits (83), Expect = 0.077
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
 Frame = -2

Query: 496  VSHYSSFC---FPAKDHPYLKANCVYFIDSYNNLCAFNLEHGTKELVEALETA--APTRS 332
            + H +S C   +PA +  YLK + + +  S+N    FN+E       +A++ A  A  RS
Sbjct: 861  LGHETSVCDAAWPAYNEEYLKEDTINYTISFNGKARFNMEFDADAASDAIQAAVLADERS 920

Query: 331  QQDVYGRHPR 302
            Q+ + G+ P+
Sbjct: 921  QKWIEGKTPK 930

>MUCDL_MOUSE (Q8VHF2) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 831

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 13/46 (28%)
 Frame = -1

Query: 692 FPPGGTAYAQPRPLS-------------APEVQLPGGDSIRRPHKG 594
           FPPGGT    P P S             +P+   PGGDS + P  G
Sbjct: 502 FPPGGTTLRPPTPASSIPGGSPTLGTSTSPQTTTPGGDSAQTPKPG 547

>VGF_HUMAN (O15240) Neurosecretory protein VGF precursor|
          Length = 616

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
 Frame = -1

Query: 695 GFPPGGTAYAQPRPLSAPEVQLPGGDSIRRPHKGQAPVAEHVCAVGPR-QGDLYLRDDQR 519
           G  P G   AQP PLS+   +   GD++  P  G AP         P+ +G+L+   D  
Sbjct: 21  GAAPPGRPEAQPPPLSSEHKEPVAGDAVPGPKDGSAPEVRGARNSEPQDEGELFQGVDP- 79

Query: 518 HWGIRAVCQPLQLVLFSGQGPSVPEG 441
               RA+   L   L     P  P G
Sbjct: 80  ----RALAAVLLQALDRPASPPAPSG 101

>IRS2_MOUSE (P81122) Insulin receptor substrate 2 (IRS-2) (4PS)|
          Length = 1321

 Score = 28.9 bits (63), Expect(2) = 1.5
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +1

Query: 625 PGN*TSGADNGRGCAYAVPPGGNPHL 702
           PG+ +S + +G G +Y +PPG +PHL
Sbjct: 442 PGSLSSSSGHGSG-SYPLPPGSHPHL 466



 Score = 21.9 bits (45), Expect(2) = 1.5
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 504 ANSPMSLVISKVEVPLSRTHSANMFCDWR 590
           A SP+S     V  PLSR+H+ +  C  R
Sbjct: 383 AGSPLSP--GPVRAPLSRSHTLSAGCGGR 409

>LOX1_ARATH (Q06327) Lipoxygenase 1 (EC 1.13.11.12)|
          Length = 859

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = +2

Query: 509 FPNVA--GHLEGRGPPVEDPQRKHVLRLALD--PYEVAGWSLHQAIE 637
           FP+ A    L+ RG  VEDP+  H LRL +   PY V G  +  AIE
Sbjct: 597 FPDQALPAELKKRGMAVEDPEAPHGLRLRIKDYPYAVDGLEVWYAIE 643

>MSH3_HUMAN (P20585) DNA mismatch repair protein Msh3 (Divergent upstream|
            protein) (DUP) (Mismatch repair protein 1) (MRP1)
          Length = 1137

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 11/72 (15%)
 Frame = -2

Query: 619  TPSGDLIRVKRQSQNMFALWVLDRGTSTFE-----------MTSDIGEFALFVSHYSSFC 473
            T + ++IR K  SQ++  L  L RGTST +              D+    LFV+HY   C
Sbjct: 957  TDTAEIIR-KATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVC 1015

Query: 472  FPAKDHPYLKAN 437
               K++ +   N
Sbjct: 1016 ELEKNYSHQVGN 1027

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 668 AQPRPLSAPEVQLPGGDSIRRPHKGQAPVAE 576
           A P+P +AP + L G D+   P +G +PV E
Sbjct: 574 AAPKPDAAPSIDLFGTDAFSSPPRGASPVPE 604

>ARGD_STRCL (Q9LCS5) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)|
          Length = 400

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 58  GIVTKAPGIRPAVQLKLQPDGFVVKVPG---IRPIPVLVTRE 174
           GIV   P + P VQL  Q  GF+V VP    +R IP LV  E
Sbjct: 332 GIVLNEP-LAPQVQLAAQKAGFLVNVPAPDVVRLIPPLVIEE 372

>QOR_CAVPO (P11415) Quinone oxidoreductase (EC 1.6.5.5) (NADPH:quinone|
           reductase) (Zeta-crystallin)
          Length = 329

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = +3

Query: 174 IQRFKFGDLLLHTSVL--GYRYTAIPASHAFSYFSEGYNHRNGSARGWRP*TSCWLRVGA 347
           +  FK GD +  TS +  GY   A+ + H      E  + R G+A G    T+C     +
Sbjct: 84  VSAFKKGDRVFTTSTISGGYAEYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHS 143

Query: 348 AVSRASTSSLV 380
           A ++A  S LV
Sbjct: 144 ARAKAGESVLV 154

>LOXA_LYCES (P38415) Lipoxygenase A (EC 1.13.11.12)|
          Length = 860

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +2

Query: 476 ERAVVADKQREFPNVA--GHLEGRGPPVEDPQRKHVLRLALD--PYEVAGWSLHQAIE 637
           E + V  K   FP+ A    L  RG  VED    H +RL +D  PY V G  +  AI+
Sbjct: 587 EMSAVVYKDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIK 644


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,950,970
Number of Sequences: 219361
Number of extensions: 2166926
Number of successful extensions: 6853
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6850
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7082949625
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)