>gb|AC165176.2| Zea mays clone ZMMBBb-177G21, complete sequence
          Length = 176679

 Score =  139 bits (70), Expect = 1e-29
 Identities = 133/154 (86%)
 Strand = Plus / Plus

                                                                         
Query: 366   acgagctccttggtcccgtgctcgaggttgaacgcgcacaggttgttgtagctgtcgatg 425
             ||||| ||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||
Sbjct: 97316 acgagttccttggtcccatgctcaaggttgaaagcgcacaggttgttgtagatgtcgatg 97375

                                                                         
Query: 426   aagtagacgcagtttgccttcaggtacggatggtccttggccggaaaacagaacgagctg 485
             ||||||| |||||| || |||||||  || ||| |  |||| || |||||||| ||| ||
Sbjct: 97376 aagtagatgcagttcgctttcaggttgggctggccactggcagggaaacagaatgagttg 97435

                                               
Query: 486   tagtggctgacaaacagcgcgaattccccaatgt 519
             |||||||| |||||||||||||  ||||||||||
Sbjct: 97436 tagtggctcacaaacagcgcgagatccccaatgt 97469

>ref|XM_550425.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1603

 Score =  103 bits (52), Expect = 8e-19
 Identities = 133/160 (83%)
 Strand = Plus / Minus

                                                                        
Query: 360  gcttctacgagctccttggtcccgtgctcgaggttgaacgcgcacaggttgttgtagctg 419
            ||||| ||||||||||| |||| || ||| |||||||| |||||||||||| |||||  |
Sbjct: 1371 gcttcgacgagctccttcgtcctgttctccaggttgaatgcgcacaggttgctgtaggag 1312

                                                                        
Query: 420  tcgatgaagtagacgcagtttgccttcaggtacggatggtccttggccggaaaacagaac 479
            || ||||||||||| || || | ||||||||   |||| ||||| ||| |  |||||| |
Sbjct: 1311 tcaatgaagtagacacaattcgacttcaggttgagatgatccttcgcccggtaacagacc 1252

                                                    
Query: 480  gagctgtagtggctgacaaacagcgcgaattccccaatgt 519
            |||||||||| ||||||||||||||| || ||||| ||||
Sbjct: 1251 gagctgtagtagctgacaaacagcgcaaagtccccgatgt 1212

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  103 bits (52), Expect = 8e-19
 Identities = 133/160 (83%)
 Strand = Plus / Minus

                                                                           
Query: 360     gcttctacgagctccttggtcccgtgctcgaggttgaacgcgcacaggttgttgtagctg 419
               ||||| ||||||||||| |||| || ||| |||||||| |||||||||||| |||||  |
Sbjct: 4436595 gcttcgacgagctccttcgtcctgttctccaggttgaatgcgcacaggttgctgtaggag 4436536

                                                                           
Query: 420     tcgatgaagtagacgcagtttgccttcaggtacggatggtccttggccggaaaacagaac 479
               || ||||||||||| || || | ||||||||   |||| ||||| ||| |  |||||| |
Sbjct: 4436535 tcaatgaagtagacacaattcgacttcaggttgagatgatccttcgcccggtaacagacc 4436476

                                                       
Query: 480     gagctgtagtggctgacaaacagcgcgaattccccaatgt 519
               |||||||||| ||||||||||||||| || ||||| ||||
Sbjct: 4436475 gagctgtagtagctgacaaacagcgcaaagtccccgatgt 4436436

>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0489A01
          Length = 137174

 Score =  103 bits (52), Expect = 8e-19
 Identities = 133/160 (83%)
 Strand = Plus / Minus

                                                                         
Query: 360   gcttctacgagctccttggtcccgtgctcgaggttgaacgcgcacaggttgttgtagctg 419
             ||||| ||||||||||| |||| || ||| |||||||| |||||||||||| |||||  |
Sbjct: 96677 gcttcgacgagctccttcgtcctgttctccaggttgaatgcgcacaggttgctgtaggag 96618

                                                                         
Query: 420   tcgatgaagtagacgcagtttgccttcaggtacggatggtccttggccggaaaacagaac 479
             || ||||||||||| || || | ||||||||   |||| ||||| ||| |  |||||| |
Sbjct: 96617 tcaatgaagtagacacaattcgacttcaggttgagatgatccttcgcccggtaacagacc 96558

                                                     
Query: 480   gagctgtagtggctgacaaacagcgcgaattccccaatgt 519
             |||||||||| ||||||||||||||| || ||||| ||||
Sbjct: 96557 gagctgtagtagctgacaaacagcgcaaagtccccgatgt 96518

>dbj|AK106385.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E05, full
            insert sequence
          Length = 1603

 Score =  103 bits (52), Expect = 8e-19
 Identities = 133/160 (83%)
 Strand = Plus / Minus

                                                                        
Query: 360  gcttctacgagctccttggtcccgtgctcgaggttgaacgcgcacaggttgttgtagctg 419
            ||||| ||||||||||| |||| || ||| |||||||| |||||||||||| |||||  |
Sbjct: 1371 gcttcgacgagctccttcgtcctgttctccaggttgaatgcgcacaggttgctgtaggag 1312

                                                                        
Query: 420  tcgatgaagtagacgcagtttgccttcaggtacggatggtccttggccggaaaacagaac 479
            || ||||||||||| || || | ||||||||   |||| ||||| ||| |  |||||| |
Sbjct: 1311 tcaatgaagtagacacaattcgacttcaggttgagatgatccttcgcccggtaacagacc 1252

                                                    
Query: 480  gagctgtagtggctgacaaacagcgcgaattccccaatgt 519
            |||||||||| ||||||||||||||| || ||||| ||||
Sbjct: 1251 gagctgtagtagctgacaaacagcgcaaagtccccgatgt 1212

>ref|XM_310860.2| Anopheles gambiae str. PEST ENSANGP00000012595
           (ENSANGG00000010106), partial mRNA
          Length = 828

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 404 caggttgttgtagctgtcgatgaagta 430
           ||||||| |||||||||||||||||||
Sbjct: 309 caggttgctgtagctgtcgatgaagta 283

>ref|XM_365884.1| Magnaporthe grisea 70-15 hypothetical protein (MG10104.4) partial
           mRNA
          Length = 2319

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 574 tgttctgcgactggcgcttga 594
           |||||||||||||||||||||
Sbjct: 952 tgttctgcgactggcgcttga 932

>ref|XM_762674.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_448_14874_17492)
            partial mRNA
          Length = 2619

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 404  caggttgttgtagctgtcgatgaagtaga 432
            ||||||||||| || ||||||||||||||
Sbjct: 2562 caggttgttgtcgcggtcgatgaagtaga 2534

>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 680     cacctgggggaaatcctcatc 700
               |||||||||||||||||||||
Sbjct: 3826623 cacctgggggaaatcctcatc 3826643

>gb|AC004896.1| Homo sapiens PAC clone RP4-811H12 from 7, complete sequence
          Length = 162215

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   cacgcattcagctatttcag 271
             ||||||||||||||||||||
Sbjct: 49678 cacgcattcagctatttcag 49659

>gb|AC132255.3| Mus musculus BAC clone RP24-472I15 from chromosome 5, complete sequence
          Length = 168528

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   caataccagtactagttact 168
             ||||||||||||||||||||
Sbjct: 33617 caataccagtactagttact 33636

>emb|Z95326.1|HS344F17 Human DNA sequence from clone RP3-344F17 on chromosome 6q22.1-22.33
             Contains part of the gene for a novel protein similar to
             FLJ13018 and other hypothetical proteins, complete
             sequence
          Length = 85832

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    tcacaaaagcaccaggaata 84
             ||||||||||||||||||||
Sbjct: 25072 tcacaaaagcaccaggaata 25091

>emb|AL157702.10| Human DNA sequence from clone RP11-18B16 on chromosome 9 Contains the
             3' end of a novel gene and a novel pseudogene, complete
             sequence
          Length = 160990

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   tattacataccagtgttcta 221
             ||||||||||||||||||||
Sbjct: 18880 tattacataccagtgttcta 18899

>emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section 7 of 21): from 1209742 to
              1410982
          Length = 201241

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 257    attcagctatttcagcgaag 276
              ||||||||||||||||||||
Sbjct: 186084 attcagctatttcagcgaag 186065

>emb|AJ002571.1|BSAJ2571 Bacillus subtilis 168 56 kb DNA fragment between xlyA and ykoR
          Length = 55593

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 257   attcagctatttcagcgaag 276
             ||||||||||||||||||||
Sbjct: 48644 attcagctatttcagcgaag 48625

>gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence
          Length = 182776

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     gtccaactcaaacttcagcc 113
              ||||||||||||||||||||
Sbjct: 120178 gtccaactcaaacttcagcc 120197

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 297    tctgctcgtgggtggcgccc 316
              ||||||||||||||||||||
Sbjct: 450258 tctgctcgtgggtggcgccc 450239

>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence
          Length = 190076

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    agggaattcagaggtttaag 188
              ||||||||||||||||||||
Sbjct: 155654 agggaattcagaggtttaag 155673

>gb|AC012003.9| Homo sapiens BAC clone RP11-498P13 from 2, complete sequence
          Length = 195950

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    ttacataccagtgttctagg 223
              ||||||||||||||||||||
Sbjct: 155703 ttacataccagtgttctagg 155722

>gb|AC093475.9| Mus musculus chromosome 1, clone RP23-54K22, complete sequence
          Length = 248543

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 636   aacttctggtgctgataatg 655
             ||||||||||||||||||||
Sbjct: 39053 aacttctggtgctgataatg 39034

>gb|U73166.1|U73166 Homo sapiens cosmid clone LUCA15 from 3p21.3, complete sequence
          Length = 8829

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  gctgcgggtgggggcagcgg 351
            ||||||||||||||||||||
Sbjct: 8527 gctgcgggtgggggcagcgg 8508

>gb|AC132224.3| Mus musculus BAC clone RP24-554P12 from 1, complete sequence
          Length = 154996

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 636    aacttctggtgctgataatg 655
              ||||||||||||||||||||
Sbjct: 131433 aacttctggtgctgataatg 131414

>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 170   gggaattcagaggtttaagtttggggat 197
             |||| ||||||||||||| |||||||||
Sbjct: 15102 gggatttcagaggtttaaatttggggat 15075

>emb|AL807797.10| Mouse DNA sequence from clone RP23-417D2 on chromosome X, complete
              sequence
          Length = 157222

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 481    agctgtagtggctgacaaac 500
              ||||||||||||||||||||
Sbjct: 137950 agctgtagtggctgacaaac 137969


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,261,038
Number of Sequences: 3902068
Number of extensions: 4261038
Number of successful extensions: 65194
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65056
Number of HSP's gapped (non-prelim): 137
length of query: 704
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 681
effective length of database: 17,143,297,704
effective search space: 11674585736424
effective search space used: 11674585736424
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)