ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19e07 |
|---|---|
| Clone Library Name | barley_pub |
>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)| Length = 264 Score = 110 bits (275), Expect(2) = 5e-47 Identities = 54/106 (50%), Positives = 76/106 (71%), Gaps = 8/106 (7%) Frame = -3 Query: 556 SCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYV 377 +CYAQ +Q++ IR+KMVEI+ + +S D+KE+VNK IP+ IGK+IEK+ I+PL +V + Sbjct: 152 TCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLI 211 Query: 376 RKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 263 KVK+LK PKFD+GKLME+HG+ + G K+DR DG E Sbjct: 212 HKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257 Score = 97.8 bits (242), Expect(2) = 5e-47 Identities = 47/62 (75%), Positives = 54/62 (87%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLTNF GM T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAIGFTK+R NQV Sbjct: 90 VQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQV 149 Query: 563 KR 558 K+ Sbjct: 150 KK 151
>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)| Length = 261 Score = 185 bits (469), Expect = 1e-46 Identities = 99/127 (77%), Positives = 108/127 (85%), Gaps = 1/127 (0%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q + + CYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGKE Sbjct: 138 CIGFTKRRPNQVKRT--CYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKE 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGA 248 IEKATSSIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP DE + G Sbjct: 196 IEKATSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG- 254 Query: 247 EEVAAAE 227 +EVAAAE Sbjct: 255 QEVAAAE 261 Score = 120 bits (301), Expect = 4e-27 Identities = 58/72 (80%), Positives = 63/72 (87%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F IGFTKRRPNQV Sbjct: 90 VQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQV 149 Query: 563 KRILLCSSKSDQ 528 KR C +++ Q Sbjct: 150 KR--TCYAQASQ 159
>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)| Length = 255 Score = 106 bits (265), Expect(2) = 1e-46 Identities = 51/99 (51%), Positives = 75/99 (75%), Gaps = 1/99 (1%) Frame = -3 Query: 550 YAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRK 371 YAQ+S++R+ R+KM+EI+ + ++C L +L +K IPEVIG+EIEK+T +IFPLQNV++RK Sbjct: 154 YAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRK 213 Query: 370 VKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 257 VK+LK PKFD G L+ +HG+ E+ G K+ D V+ Sbjct: 214 VKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252 Score = 100 bits (248), Expect(2) = 1e-46 Identities = 46/68 (67%), Positives = 58/68 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI FTKR+PNQ+ Sbjct: 90 VQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQPNQI 149 Query: 563 KRILLCSS 540 K S Sbjct: 150 KETTYAQS 157
>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)| Length = 251 Score = 119 bits (299), Expect(2) = 6e-46 Identities = 59/89 (66%), Positives = 74/89 (83%) Frame = -3 Query: 550 YAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRK 371 YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+EIE+AT SIFPLQNV VRK Sbjct: 154 YAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATGSIFPLQNVLVRK 213 Query: 370 VKILKAPKFDLGKLMEVHGDYKEDVGVKL 284 VKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 214 VKILKAPKHDAQKLLELHGE-SQDVGTKV 241 Score = 85.1 bits (209), Expect(2) = 6e-46 Identities = 40/68 (58%), Positives = 50/68 (73%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 +QG + LT+F G+ T+DKLRSLVRKWQT IEA +KTTD Y+ R+F IGFT+RR NQV Sbjct: 90 IQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRANQV 149 Query: 563 KRILLCSS 540 K+ S Sbjct: 150 KKTTYAQS 157
>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)| Length = 251 Score = 115 bits (288), Expect(2) = 1e-44 Identities = 57/89 (64%), Positives = 73/89 (82%) Frame = -3 Query: 550 YAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRK 371 YAQ+SQIR I +KM +++ NQA C +KELV K IPEVIG+ IEKAT++I+PLQNV+VRK Sbjct: 154 YAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRK 213 Query: 370 VKILKAPKFDLGKLMEVHGDYKEDVGVKL 284 VKILKAPK D KL+E+HG+ +DVG K+ Sbjct: 214 VKILKAPKHDAQKLLELHGE-SQDVGSKV 241 Score = 84.7 bits (208), Expect(2) = 1e-44 Identities = 40/68 (58%), Positives = 50/68 (73%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 +QG + LT+F G D T+DKLRSLVRKWQ+ IEA+ +KTTD Y+ R+F IGFT RR NQV Sbjct: 90 IQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQV 149 Query: 563 KRILLCSS 540 K+ S Sbjct: 150 KKTTYAQS 157
>RS3A_HELAN (P49198) 40S ribosomal protein S3a| Length = 259 Score = 170 bits (430), Expect = 5e-42 Identities = 88/125 (70%), Positives = 100/125 (80%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q + + CYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+E Sbjct: 138 CIGFTKKRANQVKRT--CYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGRE 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAE 245 IEKATSSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP +E P A Sbjct: 196 IEKATSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEAT 254 Query: 244 EVAAA 230 EV A Sbjct: 255 EVIGA 259 Score = 115 bits (287), Expect = 2e-25 Identities = 56/72 (77%), Positives = 62/72 (86%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF IGFTK+R NQV Sbjct: 90 VQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCIGFTKKRANQV 149 Query: 563 KRILLCSSKSDQ 528 KR C ++S Q Sbjct: 150 KR--TCYAQSSQ 159
>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)| Length = 259 Score = 169 bits (428), Expect = 8e-42 Identities = 86/124 (69%), Positives = 98/124 (79%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q + + CYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+E Sbjct: 138 CIGFTKKRANQQKRT--CYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGRE 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAE 245 IEKATSSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP + V E Sbjct: 196 IEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTE 255 Query: 244 EVAA 233 + A Sbjct: 256 VIGA 259 Score = 115 bits (289), Expect = 1e-25 Identities = 56/72 (77%), Positives = 62/72 (86%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 +QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF IGFTK+R NQ Sbjct: 90 IQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQ 149 Query: 563 KRILLCSSKSDQ 528 KR C ++S Q Sbjct: 150 KR--TCYAQSSQ 159
>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)| Length = 267 Score = 105 bits (263), Expect(2) = 5e-40 Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 8/112 (7%) Frame = -3 Query: 574 QTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 395 Q +CYAQ SQ+R+IR +M +I+ N+ + DLK+LVNK + I K+IEK+ I+P Sbjct: 149 QQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYP 208 Query: 394 LQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 263 L +VY+RKVK+LK P+FD+ KL+E+HGD G +DRP+G E Sbjct: 209 LHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260 Score = 79.0 bits (193), Expect(2) = 5e-40 Identities = 37/55 (67%), Positives = 43/55 (78%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKR 579 VQ NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F IGFT + Sbjct: 93 VQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAK 147
>RS3A_ARATH (Q42262) 40S ribosomal protein S3a| Length = 261 Score = 161 bits (408), Expect = 2e-39 Identities = 83/126 (65%), Positives = 98/126 (77%), Gaps = 1/126 (0%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q + + CYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+E Sbjct: 138 CIAFTKRRANQVKRT--CYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGRE 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGA 248 IEKAT I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY EDVGVK+DRP + ++ Sbjct: 196 IEKATQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEP 255 Query: 247 EEVAAA 230 E+ A Sbjct: 256 TEIIGA 261 Score = 115 bits (287), Expect = 2e-25 Identities = 57/72 (79%), Positives = 60/72 (83%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I FTKRR NQV Sbjct: 90 VQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQV 149 Query: 563 KRILLCSSKSDQ 528 KR C ++S Q Sbjct: 150 KR--TCYAQSSQ 159
>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)| Length = 268 Score = 98.2 bits (243), Expect(2) = 2e-38 Identities = 45/82 (54%), Positives = 60/82 (73%) Frame = -3 Query: 556 SCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYV 377 +CYAQ SQI+ IR KM I+ + S DLK +V K +P+ I K+IEKA ++PL +VY+ Sbjct: 155 TCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYI 214 Query: 376 RKVKILKAPKFDLGKLMEVHGD 311 RKVK+LK P+FDL LME+HGD Sbjct: 215 RKVKVLKKPRFDLSSLMELHGD 236 Score = 81.6 bits (200), Expect(2) = 2e-38 Identities = 39/53 (73%), Positives = 43/53 (81%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFT 585 V G +VLTNF GM TTDKLRS+V KWQTLIE VDVKTTD +MLR+F IGFT Sbjct: 93 VNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCIGFT 145
>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein| BIS289) Length = 261 Score = 151 bits (382), Expect = 2e-36 Identities = 83/127 (65%), Positives = 97/127 (76%), Gaps = 2/127 (1%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQ-AASCDLKELVNKFIPEVIGK 428 C+ R Q + + CYAQ+SQIRQIR KM EIM+ + A+SCDLKELV KFIPE IGK Sbjct: 138 CIAFTKRRANQVKRT--CYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGK 195 Query: 427 EIEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPG 251 +IEKAT I+PLQNV++RKVKILKAPKFDL KLMEVHGDY EDVGVK+DRP DEV+ Sbjct: 196 DIEKATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEE 254 Query: 250 AEEVAAA 230 E+ A Sbjct: 255 PTEIIGA 261 Score = 115 bits (287), Expect = 2e-25 Identities = 56/72 (77%), Positives = 61/72 (84%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I FTKRR NQV Sbjct: 90 VQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCIAFTKRRANQV 149 Query: 563 KRILLCSSKSDQ 528 KR C ++S Q Sbjct: 150 KR--TCYAQSSQ 159
>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a| Length = 247 Score = 125 bits (314), Expect = 1e-28 Identities = 69/108 (63%), Positives = 82/108 (75%), Gaps = 1/108 (0%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R TR+ YAQ+SQI IRRKM EIMV +A +CDLKELV KFIPEVIGKE Sbjct: 137 CIAFTKKRPNHTRNF---YAQSSQIA-IRRKMREIMVKEAQTCDLKELVAKFIPEVIGKE 192 Query: 424 IEKATSS-IFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 284 I++ S I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+ Sbjct: 193 IDEWRSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240 Score = 111 bits (278), Expect = 2e-24 Identities = 51/69 (73%), Positives = 58/69 (84%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I FTK+RPN Sbjct: 89 VQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCIAFTKKRPNHT 148 Query: 563 KRILLCSSK 537 + SS+ Sbjct: 149 RNFYAQSSQ 157
>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector| protein) Length = 265 Score = 122 bits (305), Expect = 2e-27 Identities = 63/123 (51%), Positives = 85/123 (69%), Gaps = 9/123 (7%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+ Sbjct: 138 CVGFTKKRNNQVRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPD 272 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R D Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERAD 255 Query: 271 GDE 263 G E Sbjct: 256 GYE 258 Score = 97.1 bits (240), Expect = 5e-20 Identities = 43/62 (69%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQV Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQV 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a| Length = 263 Score = 121 bits (304), Expect = 2e-27 Identities = 64/121 (52%), Positives = 84/121 (69%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q R ++ YAQ Q+RQIR+KMVEIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRTNQIRKTS--YAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 94.4 bits (233), Expect = 3e-19 Identities = 40/62 (64%), Positives = 52/62 (83%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCVGFTKKRTNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a| Length = 265 Score = 121 bits (304), Expect = 2e-27 Identities = 64/123 (52%), Positives = 85/123 (69%), Gaps = 9/123 (7%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKRRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPD 272 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ +D G K++R D Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERAD 255 Query: 271 GDE 263 G E Sbjct: 256 GYE 258 Score = 97.8 bits (242), Expect = 3e-20 Identities = 43/62 (69%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTKRR NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKRRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a| Length = 263 Score = 121 bits (303), Expect = 3e-27 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a| Length = 263 Score = 120 bits (301), Expect = 4e-27 Identities = 63/121 (52%), Positives = 84/121 (69%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)| Length = 263 Score = 120 bits (301), Expect = 4e-27 Identities = 63/121 (52%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a| Length = 266 Score = 120 bits (300), Expect = 6e-27 Identities = 63/124 (50%), Positives = 84/124 (67%), Gaps = 10/124 (8%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ +GK+ Sbjct: 138 CVGFTKKRTNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVKLDRP 275 IEKA SI+PL +VYVRKVK+LK PKF+LGKLME+HG+ + D G K++R Sbjct: 196 IEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERA 255 Query: 274 DGDE 263 DG E Sbjct: 256 DGYE 259 Score = 97.1 bits (240), Expect = 5e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRTNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a| Length = 263 Score = 120 bits (300), Expect = 6e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_HUMAN (P61247) 40S ribosomal protein S3a| Length = 263 Score = 120 bits (300), Expect = 6e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a| Length = 263 Score = 120 bits (300), Expect = 6e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)| Length = 260 Score = 120 bits (300), Expect = 6e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 135 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 192 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 193 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY 252 Query: 265 E 263 E Sbjct: 253 E 253 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 87 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 146 Query: 563 KR 558 ++ Sbjct: 147 RK 148
>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector| protein) [Contains: 40S ribosomal protein S3b] Length = 263 Score = 119 bits (299), Expect = 8e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_MOUSE (P97351) 40S ribosomal protein S3a| Length = 263 Score = 119 bits (299), Expect = 8e-27 Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGD 266 IEKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 IEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a| Length = 263 Score = 119 bits (297), Expect = 1e-26 Identities = 61/121 (50%), Positives = 85/121 (70%), Gaps = 7/121 (5%) Frame = -3 Query: 604 CLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKE 425 C+ R+ Q R ++ YAQ Q+RQIR+KM+EIM + + DLKE+VNK IP+ IGK+ Sbjct: 138 CVGFTKKRNNQIRKTS--YAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKD 195 Query: 424 IEKATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGD 266 +EKA SI+PL +V+VRKVK+LK PKF+LGKLME+HG+ ++ G K++R DG Sbjct: 196 MEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGY 255 Query: 265 E 263 E Sbjct: 256 E 256 Score = 96.7 bits (239), Expect = 7e-20 Identities = 42/62 (67%), Positives = 53/62 (85%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +GFTK+R NQ+ Sbjct: 90 VQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQI 149 Query: 563 KR 558 ++ Sbjct: 150 RK 151
>RS3A_CAEEL (P48154) 40S ribosomal protein S3a| Length = 256 Score = 102 bits (253), Expect = 2e-21 Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 2/113 (1%) Frame = -3 Query: 595 LASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK 416 +A + + + + Y + S+IR+IR +M+ + + CDLKE+V+K IP+ IGK+IEK Sbjct: 137 IAFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEK 196 Query: 415 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 263 S ++PLQ VY+RKVKI+K PK DLG+L ++HGD G K+DRPD E Sbjct: 197 TCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249 Score = 81.6 bits (200), Expect = 2e-15 Identities = 40/62 (64%), Positives = 46/62 (74%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG NVLTNF M T DKL S+V+KW TLIEA+ VKTTD Y LR+F I FTK+ NQV Sbjct: 88 VQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQV 147 Query: 563 KR 558 K+ Sbjct: 148 KK 149
>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)| Length = 254 Score = 100 bits (249), Expect = 5e-21 Identities = 47/62 (75%), Positives = 57/62 (91%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQV Sbjct: 90 VQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQV 149 Query: 563 KR 558 KR Sbjct: 150 KR 151 Score = 97.4 bits (241), Expect = 4e-20 Identities = 48/95 (50%), Positives = 64/95 (67%) Frame = -3 Query: 595 LASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK 416 +A R + YAQ+S IR IR+ + EI+ + + L +L +K IPEVI KEIE Sbjct: 139 IAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIEN 198 Query: 415 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 311 AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 199 ATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)| Length = 254 Score = 100 bits (249), Expect = 5e-21 Identities = 47/62 (75%), Positives = 57/62 (91%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI FT+++ NQV Sbjct: 90 VQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQV 149 Query: 563 KR 558 KR Sbjct: 150 KR 151 Score = 97.1 bits (240), Expect = 5e-20 Identities = 48/95 (50%), Positives = 63/95 (66%) Frame = -3 Query: 595 LASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK 416 +A R + YAQ+S IR IR+ + EI+ + L +L +K IPEVI KEIE Sbjct: 139 IAFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIEN 198 Query: 415 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 311 AT IFPLQN++VRKVK+LK PKFD+G LM +HG+ Sbjct: 199 ATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233
>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae| Length = 198 Score = 47.4 bits (111), Expect(2) = 6e-12 Identities = 24/66 (36%), Positives = 38/66 (57%) Frame = -3 Query: 544 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 365 Q SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K Sbjct: 130 QTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAKKIYPLRKAEIRKIK 189 Query: 364 ILKAPK 347 +L+ P+ Sbjct: 190 VLEEPQ 195 Score = 43.1 bits (100), Expect(2) = 6e-12 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Sbjct: 73 VKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAIAMRR 128
>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae| Length = 211 Score = 48.5 bits (114), Expect(2) = 2e-11 Identities = 25/56 (44%), Positives = 32/56 (57%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V G N T FW + T + L SL R+ + IE VDV T D Y LR+ ++ FT RR Sbjct: 76 VAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSVVFTVRR 131 Score = 40.0 bits (92), Expect(2) = 2e-11 Identities = 20/65 (30%), Positives = 38/65 (58%) Frame = -3 Query: 544 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 365 + SQ R IR M +I+V +A+S + + + + + + EI K I+P++ V +RK++ Sbjct: 133 KTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIE 192 Query: 364 ILKAP 350 +L P Sbjct: 193 LLAEP 197
>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae| Length = 199 Score = 45.4 bits (106), Expect(2) = 2e-11 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = -3 Query: 544 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 365 Q SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K Sbjct: 132 QTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGKKIYPLKKAEIRKIK 191 Query: 364 ILKAPK 347 +L P+ Sbjct: 192 VLGEPE 197 Score = 43.1 bits (100), Expect(2) = 2e-11 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Sbjct: 75 VKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAIAMRR 130
>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae| Length = 199 Score = 46.2 bits (108), Expect(2) = 3e-11 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = -3 Query: 544 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 365 Q SQ R IR+ M EI+ +A + K+ V + + I EI K I+PL+ +RK+K Sbjct: 131 QTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAKKIYPLKKAEIRKIK 190 Query: 364 ILKAPK 347 +L P+ Sbjct: 191 VLGEPE 196 Score = 42.0 bits (97), Expect(2) = 3e-11 Identities = 22/56 (39%), Positives = 30/56 (53%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G N T F GM +RSLVR+ T I+ ++ T D Y LR+ A+ RR Sbjct: 74 VKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVIAARR 129
>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae| Length = 221 Score = 48.1 bits (113), Expect(2) = 4e-11 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G LT F G++ T D +RSLVRK + + A +VKT D ++R+ +G T R Sbjct: 82 VEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGITTHR 137 Score = 39.3 bits (90), Expect(2) = 4e-11 Identities = 17/63 (26%), Positives = 35/63 (55%) Frame = -3 Query: 538 SQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKIL 359 +Q +R+KM+E +V +AA D + + + + + ++ I P++ V + K+K+L Sbjct: 141 AQKSAMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVL 200 Query: 358 KAP 350 K P Sbjct: 201 KYP 203
>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae| Length = 211 Score = 44.3 bits (103), Expect(2) = 1e-10 Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 4/70 (5%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIP----EVIGKEIEKATSSIFPLQNVY 380 A+ SQ R IR++M +++ A CD E + + + E I ++I++A I+P++ Sbjct: 122 AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAE 181 Query: 379 VRKVKILKAP 350 +RK ++L+ P Sbjct: 182 IRKTEVLEEP 191 Score = 42.0 bits (97), Expect(2) = 1e-10 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G + F G D +RSLVR+ + I+ +DV T D Y +R+ + FT RR Sbjct: 66 VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAFTTRR 121
>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae| Length = 203 Score = 46.2 bits (108), Expect(2) = 1e-10 Identities = 23/56 (41%), Positives = 36/56 (64%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V G T+ G + TTD +RS+V++ + I+A+VDVKT D Y++R+ FT +R Sbjct: 73 VVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCFTIKR 128 Score = 40.0 bits (92), Expect(2) = 1e-10 Identities = 21/66 (31%), Positives = 37/66 (56%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A++SQ++ IR MVEI+ +AA D + + + I + I + I+PL+ V +RK Sbjct: 129 ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKT 188 Query: 367 KILKAP 350 ++ P Sbjct: 189 EVETIP 194
>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae| Length = 193 Score = 46.2 bits (108), Expect(2) = 3e-10 Identities = 23/62 (37%), Positives = 38/62 (61%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 V+G +LT F G + + D +RSLVR+ + I+A DV T D Y+LR+ + T R ++ Sbjct: 71 VEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGLALTTYRAHRS 130 Query: 563 KR 558 ++ Sbjct: 131 QK 132 Score = 38.5 bits (88), Expect(2) = 3e-10 Identities = 21/66 (31%), Positives = 34/66 (51%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A SQ +IR+ + I+ +A+ E V + + +I + I+PL+ V V K Sbjct: 127 AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQAKKIYPLRKVEVEKT 186 Query: 367 KILKAP 350 K+LKAP Sbjct: 187 KLLKAP 192
>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae| Length = 204 Score = 43.1 bits (100), Expect(2) = 4e-09 Identities = 21/56 (37%), Positives = 36/56 (64%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V G T+ G + TTD +RS+V++ + I+A+VDV+T D +++R+ FT +R Sbjct: 73 VVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIKR 128 Score = 37.7 bits (86), Expect(2) = 4e-09 Identities = 19/66 (28%), Positives = 37/66 (56%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A++SQ++ IR MV+I+ +A+ D + + + I + I + I+PL+ V +RK Sbjct: 129 ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKT 188 Query: 367 KILKAP 350 ++ P Sbjct: 189 QVEAMP 194
>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae| Length = 200 Score = 40.8 bits (94), Expect(2) = 3e-08 Identities = 21/65 (32%), Positives = 35/65 (53%) Frame = -3 Query: 544 QASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVK 365 Q SQ R IR+ + +I+ +A + + V + + I EI K I+P++ VRK+K Sbjct: 134 QTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEARKIYPIKRAEVRKIK 193 Query: 364 ILKAP 350 +L P Sbjct: 194 VLAEP 198 Score = 37.0 bits (84), Expect(2) = 3e-08 Identities = 19/56 (33%), Positives = 28/56 (50%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G N T F G +RSLVR+ T ++ ++ T D Y LR+ + RR Sbjct: 77 VKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVIAYRR 132
>RS3A_METTH (O27630) 30S ribosomal protein S3Ae| Length = 195 Score = 42.7 bits (99), Expect(2) = 5e-08 Identities = 21/56 (37%), Positives = 32/56 (57%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V G T F G TTD +RS++R+ + ++A V V+T D Y L++ + T RR Sbjct: 73 VAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPLAITIRR 128 Score = 34.3 bits (77), Expect(2) = 5e-08 Identities = 19/66 (28%), Positives = 35/66 (53%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A++SQ + +R+ + E + A+ +ELV + I EI I+PL+ V + K Sbjct: 129 AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQAKKIYPLKRVEIIKS 188 Query: 367 KILKAP 350 ++L+ P Sbjct: 189 RVLEEP 194
>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae| Length = 208 Score = 39.3 bits (90), Expect(2) = 8e-08 Identities = 19/61 (31%), Positives = 36/61 (59%) Frame = -2 Query: 740 QGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVK 561 +G ++T F G + + D LRSL+R+ + I + DV T D Y++R+ + T + +Q + Sbjct: 73 EGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQ 132 Query: 560 R 558 + Sbjct: 133 K 133 Score = 37.0 bits (84), Expect(2) = 8e-08 Identities = 21/72 (29%), Positives = 38/72 (52%) Frame = -3 Query: 538 SQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKIL 359 SQ IR+ + E + +A+ + + + + EI +A I+PL+ + K K+L Sbjct: 131 SQKTAIRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAEIEKTKVL 190 Query: 358 KAPKFDLGKLME 323 K P+ +LGK +E Sbjct: 191 KVPE-NLGKQVE 201
>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae| Length = 213 Score = 39.7 bits (91), Expect(2) = 1e-07 Identities = 19/56 (33%), Positives = 33/56 (58%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V + T F + T D LRSLVR+ + +EA++ V TTD+Y +++ + T ++ Sbjct: 70 VASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVTTKK 125 Score = 35.8 bits (81), Expect(2) = 1e-07 Identities = 24/94 (25%), Positives = 44/94 (46%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A ASQ + IRR M++++ A ++L++ + + I I+PL+ V ++K Sbjct: 126 ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKT 185 Query: 367 KILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 266 + P+ EV + E+ V +D D D Sbjct: 186 TLEARPE-------EVAAE--EETAVDVDEEDVD 210
>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae| Length = 215 Score = 37.0 bits (84), Expect(2) = 4e-05 Identities = 20/70 (28%), Positives = 37/70 (52%) Frame = -3 Query: 526 QIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 347 QIR+ + + ++N+ S E V I + I ++ AT I+PL+ + VRK +++ Sbjct: 137 QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV---- 192 Query: 346 FDLGKLMEVH 317 L + E+H Sbjct: 193 -SLSGISEIH 201 Score = 30.0 bits (66), Expect(2) = 4e-05 Identities = 18/61 (29%), Positives = 30/61 (49%) Frame = -2 Query: 740 QGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVK 561 +G T F G D +R LVR+ + I+ DVKT+DN ++ + + T + K Sbjct: 75 EGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTK 134 Query: 560 R 558 + Sbjct: 135 K 135
>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae| Length = 197 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/73 (35%), Positives = 40/73 (54%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 564 + G + T F+G + + D +RSLVR+ + I A VDV T D YMLR+ + T R + Sbjct: 74 ISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYRAHIS 133 Query: 563 KRILLCSSKSDQT 525 ++ + SD T Sbjct: 134 QKTAIRKVISDIT 146 Score = 39.7 bits (91), Expect = 0.010 Identities = 22/67 (32%), Positives = 34/67 (50%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A SQ IR+ + +I +A D + V I + +I + I+PL+ V + K Sbjct: 130 AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRKVEIEKT 189 Query: 367 KILKAPK 347 K+LKAPK Sbjct: 190 KLLKAPK 196
>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae| Length = 215 Score = 30.8 bits (68), Expect(2) = 0.033 Identities = 20/97 (20%), Positives = 43/97 (44%) Frame = -3 Query: 526 QIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKILKAPK 347 +IR+ + +V++ + + V I + ++ +AT +I+PL+ + +RK Sbjct: 137 EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATKNIYPLRKIEIRK-------- 188 Query: 346 FDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 236 +L+ + G + P +E PG E +A Sbjct: 189 ---SELVSLSG---------MQEPQKNEPAPGGEAIA 213 Score = 26.2 bits (56), Expect(2) = 0.033 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = -2 Query: 740 QGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYML 609 +G T F G D +R LVR+ + I+ DVKT+D ++ Sbjct: 75 EGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSII 118
>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae| Length = 221 Score = 37.7 bits (86), Expect = 0.038 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = -2 Query: 743 VQGXNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 576 V+G T F G + D +R L R+ + + +V T D Y LR+ A+ FT++R Sbjct: 77 VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAFTRQR 132
>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae| Length = 206 Score = 36.6 bits (83), Expect = 0.085 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = -2 Query: 722 TNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQ 567 T F + T D RSLVR+ + + V V TTD+Y +R+ + +T ++ +Q Sbjct: 76 TQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAYTTKQADQ 127
>RS3A_METJA (P54059) 30S ribosomal protein S3Ae| Length = 222 Score = 33.9 bits (76), Expect = 0.55 Identities = 19/67 (28%), Positives = 32/67 (47%) Frame = -3 Query: 547 AQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKV 368 A Q IR+KM EI+ A + V + + ++I+ IFP++NV + K Sbjct: 136 ANTKQKSDIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNVIIYKS 195 Query: 367 KILKAPK 347 ++L K Sbjct: 196 EVLSLAK 202
>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae| Length = 209 Score = 30.4 bits (67), Expect = 6.1 Identities = 13/61 (21%), Positives = 32/61 (52%) Frame = -3 Query: 541 ASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVYVRKVKI 362 A++ ++R K++ + + S L EL I + + +I ++P++ + +RK ++ Sbjct: 131 ANKRGEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEV 190 Query: 361 L 359 L Sbjct: 191 L 191
>VGNM_CPSMV (P31630) Genome polyprotein M (RNA2 polyprotein) [Contains:| Movement protein (MP); Large coat protein (LCP) (Coat protein VP37); Small coat protein (SCP) (Coat protein VP23)] Length = 1002 Score = 30.0 bits (66), Expect = 7.9 Identities = 18/87 (20%), Positives = 39/87 (44%) Frame = -3 Query: 610 SACLPLASPRDAQTRSSASCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIG 431 ++C+P+ ++ S + S+++ + +EI++N AS D L + + Sbjct: 187 TSCVPITLTEESVGNSDYTTEETNSEVKSLHVGAIEIVMNSFASSDCNILGGFLLIDTCH 246 Query: 430 KEIEKATSSIFPLQNVYVRKVKILKAP 350 +I A SIF R ++++ P Sbjct: 247 TDINNAIRSIFVAPMRGGRPIRMISFP 273 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 95,665,004 Number of Sequences: 219361 Number of extensions: 1790390 Number of successful extensions: 4705 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4515 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4699 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7819576386 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
