>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score =  194 bits (98), Expect = 3e-46
 Identities = 140/154 (90%)
 Strand = Plus / Plus

                                                                         
Query: 291   ttattgaaggcaacacaaacactccttggcgggcttgtccgatgcagctccttgccataa 350
             ||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||
Sbjct: 94160 ttattgaaggcaacacaaacactccttggcgggcttgtcagatgcagctcgttggcataa 94219

                                                                         
Query: 351   ctagttaagccacgacgacttgtgcaatttccacaccgttcttggtgcacagatcgtggc 410
             ||||||||||   ||||||||| ||||||||  ||  |||||||||||||||||||||||
Sbjct: 94220 ctagttaagctgtgacgacttgcgcaatttcggcattgttcttggtgcacagatcgtggc 94279

                                               
Query: 411   attcactggtgcagcgttccatggcatcgttccc 444
             || |||| |||||||||||||||||||| |||||
Sbjct: 94280 atccactagtgcagcgttccatggcatctttccc 94313



 Score =  153 bits (77), Expect = 9e-34
 Identities = 149/173 (86%)
 Strand = Plus / Plus

                                                                         
Query: 516   tctctatatcaatataaccggacttgcattcagttccagcgtcgtttgatatatagccgg 575
             |||||||||| ||| |||||||||||||||||  ||||||| ||| ||||||||||||  
Sbjct: 95006 tctctatatctataaaaccggacttgcattcaaatccagcggcgtctgatatatagccat 95065

                                                                         
Query: 576   cggaaacaccgcagcactctgagacagtgctatcagatttggcgcggcagtcaaaatagg 635
             | |||  |||||||||||||||||| ||||||||||||||  ||||||| | ||| ||||
Sbjct: 95066 cagaagaaccgcagcactctgagacggtgctatcagatttctcgcggcacttaaagtagg 95125

                                                                  
Query: 636   tagggaccgagtctagatgacaacagcaatgggaggcttgcgcttgctgggtt 688
             ||||||| ||||||||||| ||||| || ||||| |||||  |||||||||||
Sbjct: 95126 tagggacggagtctagatggcaacaacagtgggatgcttgtacttgctgggtt 95178



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 56/59 (94%)
 Strand = Plus / Plus

                                                                        
Query: 443   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 501
             |||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 94545 ccagatggagttactttgttgcacaaggaagccttgcaccccagcttgcagtagttgac 94603



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 76/87 (87%), Gaps = 1/87 (1%)
 Strand = Plus / Plus

                                                                         
Query: 235   taaaattgcaacacaagtaacatttgacat-atactggtcttggatgcgacatccagtta 293
             |||||||| |||||||||||||||||||||  ||||| | ||||||| |||| ||| |||
Sbjct: 89611 taaaattgtaacacaagtaacatttgacatcctactgatattggatgtgacacccaatta 89670

                                        
Query: 294   ttgaaggcaacacaaacactccttggc 320
             |||||| ||||| || |||||||||||
Sbjct: 89671 ttgaagacaacataatcactccttggc 89697



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 53/59 (89%)
 Strand = Plus / Plus

                                                                        
Query: 443   ccagatggagttactttgttacacaaggaagccgtgcaccccaacttgcagtagttgac 501
             ||||||| ||||| | |||| |||| ||||||||||||||||| |||||||||||||||
Sbjct: 90272 ccagatgaagttaatgtgttgcacacggaagccgtgcaccccagcttgcagtagttgac 90330



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 99    aaactgaacaagatttcactaaaatcatg 127
             ||||| |||||||||||||||||| ||||
Sbjct: 94003 aaactaaacaagatttcactaaaagcatg 94031

>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                          
Query: 244    aacacaagtaacatttgacatatactggtcttggatgcgacatccagttattgaaggcaa 303
              ||||||||||||||||||||| ||||| | |||| || |||||||| |||||||||||||
Sbjct: 181652 aacacaagtaacatttgacatctactgatattgggtgtgacatccaattattgaaggcaa 181711

                               
Query: 304    cacaaacactccttggc 320
              || ||||||||||||||
Sbjct: 181712 cataaacactccttggc 181728



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 656    caacagcaatgggaggcttgcgcttgctgggtt 688
              ||||| |||||||| ||||| ||||||||||||
Sbjct: 179367 caacaacaatgggaagcttgtgcttgctgggtt 179399



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 274    ttggatgcgacatccagttattgaaggcaacacaaacactccttggcgggctt 326
              ||||||| || ||||| | | ||||||||||| || ||||||||||| |||||
Sbjct: 179148 ttggatgtgaaatccaatcactgaaggcaacataagcactccttggctggctt 179200

>gb|AC126263.4| Mus musculus BAC clone RP23-359P12 from chromosome 8, complete sequence
          Length = 223991

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 651    gatgacaacagcaatgggagg 671
              |||||||||||||||||||||
Sbjct: 198804 gatgacaacagcaatgggagg 198784

>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1,
            complete sequence
          Length = 232503

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 458  ttgttacacaaggaagccgtg 478
            |||||||||||||||||||||
Sbjct: 9575 ttgttacacaaggaagccgtg 9555

>gb|AC147558.3| Mus musculus BAC clone RP23-470N2 from 8, complete sequence
          Length = 212626

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 651    gatgacaacagcaatgggagg 671
              |||||||||||||||||||||
Sbjct: 164869 gatgacaacagcaatgggagg 164889

>ref|XM_631184.1| Dictyostelium discoideum hypothetical protein (DDB0219427), partial
           mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 227 attggagctaaaattgcaac 246
           ||||||||||||||||||||
Sbjct: 977 attggagctaaaattgcaac 958

>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome
          Length = 1111496

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   aactgaacaagatttcactaaaat 123
             ||||||||||||||| ||||||||
Sbjct: 69216 aactgaacaagatttaactaaaat 69239

>gb|AY326313.1| Paenibacillus sp. Dex70-34 RNA binding protein-like protein gene,
            partial cds; dextranase 1 (dex1) gene, complete cds; and
            methyl-accepting chemotaxis protein histidine kinase
            gene, partial cds
          Length = 4615

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 426  gttccatggcatcgttccca 445
            ||||||||||||||||||||
Sbjct: 4344 gttccatggcatcgttccca 4363

>gb|AC108797.8| Mus musculus chromosome 3, clone RP23-349M18, complete sequence
          Length = 208211

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 536   gacttgcattcagttccagc 555
             ||||||||||||||||||||
Sbjct: 99147 gacttgcattcagttccagc 99166

>emb|AL356552.8| Human DNA sequence from clone RP4-732F8 on chromosome 1p34.3-36.11
            Contains GSSs, complete sequence
          Length = 25633

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 221  agccttattggagctaaaat 240
            ||||||||||||||||||||
Sbjct: 2139 agccttattggagctaaaat 2158

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 123     tcatgctttgacaatgtcatacgc 146
               ||||||||||| ||||||||||||
Sbjct: 4375064 tcatgctttgataatgtcatacgc 4375087

>emb|AJ235270.1|RPXX01 Rickettsia prowazekii strain Madrid E, complete genome; segment 1/4
          Length = 282610

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 100   aactgaacaagatttcactaaaat 123
             ||||||||||||||| ||||||||
Sbjct: 91751 aactgaacaagatttaactaaaat 91728

>gb|AC108685.4| Homo sapiens X BAC RP11-323F16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178333

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    gccttattggagctaaaatt 241
              ||||||||||||||||||||
Sbjct: 102244 gccttattggagctaaaatt 102263

>gb|AC144807.23| Medicago truncatula clone mth2-9j13, complete sequence
          Length = 115904

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   acaacaaaaacatctaatat 173
             ||||||||||||||||||||
Sbjct: 58947 acaacaaaaacatctaatat 58928

>gb|AC106882.5| Homo sapiens BAC clone RP11-768B22 from 4, complete sequence
          Length = 176692

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   tgaaactttctctatatcaa 527
             ||||||||||||||||||||
Sbjct: 31283 tgaaactttctctatatcaa 31302

>gb|AC106713.3| Homo sapiens X BAC RP11-770A12 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125790

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   gccttattggagctaaaatt 241
             ||||||||||||||||||||
Sbjct: 78077 gccttattggagctaaaatt 78058

>gb|AC096774.1| Homo sapiens BAC clone RP11-286D5 from 4, complete sequence
          Length = 178438

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   caaggatacaacaaaaacat 166
             ||||||||||||||||||||
Sbjct: 16755 caaggatacaacaaaaacat 16736

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    tccttggcgggcttgtccga 332
              ||||||||||||||||||||
Sbjct: 107672 tccttggcgggcttgtccga 107653

>emb|Z82397.1|RPZ82397 R.prowazekii genomic DNA fragment (clone A3F)
          Length = 682

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 100 aactgaacaagatttcactaaaat 123
           ||||||||||||||| ||||||||
Sbjct: 578 aactgaacaagatttaactaaaat 601

>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      tccctttattatttgtaaccttaa 31
              |||||||||||||| |||||||||
Sbjct: 323975 tccctttattatttttaaccttaa 323998

>dbj|AP001137.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, LL56-APP region,
              clone:B812P3
          Length = 203959

 Score = 40.1 bits (20), Expect = 9.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 8      tccctttattatttgtaaccttaa 31
              |||||||||||||| |||||||||
Sbjct: 188330 tccctttattatttttaaccttaa 188353


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,239,782
Number of Sequences: 3902068
Number of extensions: 5239782
Number of successful extensions: 85816
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85723
Number of HSP's gapped (non-prelim): 92
length of query: 700
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 677
effective length of database: 17,143,297,704
effective search space: 11606012545608
effective search space used: 11606012545608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)