ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19d24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 5e-93
2dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 5e-93
3dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 349 5e-93
4dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mR... 349 5e-93
5gb|AY111094.1| Zea mays CL9802_1 mRNA sequence 278 2e-71
6gb|AY109022.1| Zea mays PCO082032 mRNA sequence 278 2e-71
7gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA 139 9e-30
8ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 ... 115 1e-22
9gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b... 115 1e-22
10emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 109 8e-21
11dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
12gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene clu... 103 5e-19
13gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 94 5e-16
14gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete s... 94 5e-16
15gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasom... 94 5e-16
16gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11... 90 7e-15
17ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV... 82 2e-12
18gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a... 82 2e-12
19dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome reg... 82 2e-12
20gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mR... 82 2e-12
21emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
22gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, comp... 82 2e-12
23emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
24dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 78 3e-11
25ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.39
26ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical... 44 0.39
27ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome com... 42 1.6
28gb|AY106142.1| Zea mays PCO072430 mRNA sequence 42 1.6
29ref|XM_638353.1| Dictyostelium discoideum hypothetical protein (... 40 6.1
30gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete... 40 6.1
31gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete... 40 6.1
32gb|AE006083.1| Pasteurella multocida subsp. multocida str. Pm70 ... 40 6.1
33gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 40 6.1
34gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosom... 40 6.1
35emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chr... 40 6.1
36emb|X16990.1|ANFACA Aspergillus nidulans facA (= acuA) gene for ... 40 6.1
37gb|AF038842.1| Drosophila melanogaster midline fasciclin precurs... 40 6.1
38gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (... 40 6.1
39ref|NM_176478.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
40ref|NM_176477.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
41ref|NM_176476.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
42ref|NM_176475.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
43ref|NM_176474.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
44ref|NM_176473.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
45ref|NM_176472.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
46ref|NM_176471.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
47ref|NM_176470.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
48ref|NM_176469.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
49ref|NM_176468.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
50ref|NM_176467.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
51ref|NM_176466.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
52ref|NM_169444.1| Drosophila melanogaster midline fasciclin CG335... 40 6.1
53gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, com... 40 6.1
54ref|NM_079600.2| Drosophila melanogaster midline fasciclin CG335... 40 6.1
55gb|AY069094.1| Drosophila melanogaster GH11519 full length cDNA 40 6.1
56emb|BX276188.11| Zebrafish DNA sequence from clone CH211-245A19,... 40 6.1
57gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, ... 40 6.1
58gb|AC084447.1|AC084447 Caenorhabditis briggsae cosmid CB019G12, ... 40 6.1
59ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949 ... 40 6.1
60gb|AC005720.6|AC005720 Drosophila melanogaster, chromosome 3L, r... 40 6.1
61gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32... 40 6.1
62gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80... 40 6.1
63emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromo... 40 6.1
64emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on ch... 40 6.1 
>dbj|AK104076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C08, full
            insert sequence
          Length = 1325

 Score =  349 bits (176), Expect = 5e-93
 Identities = 238/256 (92%), Gaps = 2/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 201  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 260
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1057 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 998

                                                                        
Query: 261  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 320
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 997  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 938

                                                                        
Query: 321  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 380
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 937  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 878

                                                                        
Query: 381  ggagcagattaaacacatcctgcaagtggtacaaaaatctcgtggttcagtgggagcttt 440
            |||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||
Sbjct: 877  ggagcagattaaacacatcctgcaagtggtac-aaaatctcatgattcagtgggagc-tt 820

                            
Query: 441  cccttcaattacaaga 456
            ||||||||||||||||
Sbjct: 819  cccttcaattacaaga 804



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 6    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1238 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1180

                  
Query: 65   tgtaaa 70
            ||||||
Sbjct: 1179 tgtaaa 1174
to top
>dbj|AK103551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F12, full
            insert sequence
          Length = 1431

 Score =  349 bits (176), Expect = 5e-93
 Identities = 238/256 (92%), Gaps = 2/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 201  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 260
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1130 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1071

                                                                        
Query: 261  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 320
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1070 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 1011

                                                                        
Query: 321  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 380
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 1010 acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 951

                                                                        
Query: 381  ggagcagattaaacacatcctgcaagtggtacaaaaatctcgtggttcagtgggagcttt 440
            |||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||
Sbjct: 950  ggagcagattaaacacatcctgcaagtggtac-aaaatctcatgattcagtgggagc-tt 893

                            
Query: 441  cccttcaattacaaga 456
            ||||||||||||||||
Sbjct: 892  cccttcaattacaaga 877



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 6    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1311 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1253

                  
Query: 65   tgtaaa 70
            ||||||
Sbjct: 1252 tgtaaa 1247
to top
>dbj|AK061835.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D07, full
            insert sequence
          Length = 1373

 Score =  349 bits (176), Expect = 5e-93
 Identities = 238/256 (92%), Gaps = 2/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 201  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 260
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1072 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 1013

                                                                        
Query: 261  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 320
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 1012 tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 953

                                                                        
Query: 321  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 380
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 952  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 893

                                                                        
Query: 381  ggagcagattaaacacatcctgcaagtggtacaaaaatctcgtggttcagtgggagcttt 440
            |||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||
Sbjct: 892  ggagcagattaaacacatcctgcaagtggtac-aaaatctcatgattcagtgggagc-tt 835

                            
Query: 441  cccttcaattacaaga 456
            ||||||||||||||||
Sbjct: 834  cccttcaattacaaga 819



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 6    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1253 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1195

                  
Query: 65   tgtaaa 70
            ||||||
Sbjct: 1194 tgtaaa 1189
to top
>dbj|AB037150.1| Oryza sativa (japonica cultivar-group) OsRPN8 mRNA for 26S proteasome
            regulatory particle non-ATPase subunit8, complete cds
          Length = 1308

 Score =  349 bits (176), Expect = 5e-93
 Identities = 238/256 (92%), Gaps = 2/256 (0%)
 Strand = Plus / Minus

                                                                        
Query: 201  taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgt 260
            |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1042 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatcttgt 983

                                                                        
Query: 261  tgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgacca 320
            | |||||||| || ||||| |||||||||||||||||||| ||||||| |||||||||||
Sbjct: 982  tattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatatgacca 923

                                                                        
Query: 321  gcatcatatcatttgttttcactgcaaaggctttaatgagctcatttacgttgagattgg 380
             ||||||||| |||||||| ||||||||||||||||| ||||| ||||| ||||||||||
Sbjct: 922  acatcatatcgtttgttttaactgcaaaggctttaataagctcgtttacattgagattgg 863

                                                                        
Query: 381  ggagcagattaaacacatcctgcaagtggtacaaaaatctcgtggttcagtgggagcttt 440
            |||||||||||||||||||||||||||||||| |||||||| || |||||||||||| ||
Sbjct: 862  ggagcagattaaacacatcctgcaagtggtac-aaaatctcatgattcagtgggagc-tt 805

                            
Query: 441  cccttcaattacaaga 456
            ||||||||||||||||
Sbjct: 804  cccttcaattacaaga 789



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                        
Query: 6    agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
            |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 1223 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 1165

                  
Query: 65   tgtaaa 70
            ||||||
Sbjct: 1164 tgtaaa 1159
to top
>gb|AY111094.1| Zea mays CL9802_1 mRNA sequence
          Length = 747

 Score =  278 bits (140), Expect = 2e-71
 Identities = 244/276 (88%), Gaps = 2/276 (0%)
 Strand = Plus / Plus

                                                                       
Query: 181 cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 240
           ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 323 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 382

                                                                       
Query: 241 ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 300
           |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 383 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 442

                                                                       
Query: 301 ggaagacaggtatatgaccagcatcatatcatttgttttcactgcaaaggctttaatgag 360
            |||||||||||||| |||| |||||| || |||||||||||||||||||||||||| ||
Sbjct: 443 agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 502

                                                                       
Query: 361 ctcatttacgttgagattggggagcagattaaacacatcctgcaagtggtacaaaaatct 420
           |||||||||||| | ||| || || |||||||| ||||||||||| |||||| ||||| |
Sbjct: 503 ctcatttacgttcaaatttggaaggagattaaagacatcctgcaaatggtac-aaaattt 561

                                               
Query: 421 cgtggttcagtgggagctttcccttcaattacaaga 456
           |||| |||||||||||| ||||| ||||||||||||
Sbjct: 562 cgtgattcagtgggagc-ttcccgtcaattacaaga 596
to top
>gb|AY109022.1| Zea mays PCO082032 mRNA sequence
          Length = 1409

 Score =  278 bits (140), Expect = 2e-71
 Identities = 244/276 (88%), Gaps = 2/276 (0%)
 Strand = Plus / Minus

                                                                        
Query: 181  cgtttagctcccggctgccgtaggtatggcggctggcttcgaatcctcggccttctcatg 240
            ||||||||| ||||| || ||||| ||||||| ||| |||||||||||||||||||| ||
Sbjct: 1069 cgtttagcttccggcagcagtaggaatggcggttggtttcgaatcctcggccttctcgtg 1010

                                                                        
Query: 241  ctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccggataag 300
            |||||||||||||||||| |||||||| |||||||| || || ||||| |||||||| ||
Sbjct: 1009 ctccttgtttagcatcttattgttgattaaattgtgaagcgcaatgacgctccggatcag 950

                                                                        
Query: 301  ggaagacaggtatatgaccagcatcatatcatttgttttcactgcaaaggctttaatgag 360
             |||||||||||||| |||| |||||| || |||||||||||||||||||||||||| ||
Sbjct: 949  agaagacaggtatatcaccaacatcatgtcgtttgttttcactgcaaaggctttaattag 890

                                                                        
Query: 361  ctcatttacgttgagattggggagcagattaaacacatcctgcaagtggtacaaaaatct 420
            |||||||||||| | ||| || || |||||||| ||||||||||| |||||| ||||| |
Sbjct: 889  ctcatttacgttcaaatttggaaggagattaaagacatcctgcaaatggtac-aaaattt 831

                                                
Query: 421  cgtggttcagtgggagctttcccttcaattacaaga 456
            |||| |||||||||||| ||||| ||||||||||||
Sbjct: 830  cgtgattcagtgggagc-ttcccgtcaattacaaga 796
to top
>gb|DQ222517.1| Solanum tuberosum clone 119G03 unknown mRNA
          Length = 1191

 Score =  139 bits (70), Expect = 9e-30
 Identities = 115/130 (88%)
 Strand = Plus / Minus

                                                                       
Query: 215 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 274
           |||||||||||||| ||||| || || |||||||| |||||||||||||||||||| || 
Sbjct: 902 ggcttcgaatcctcagccttttcgtgttccttgttaagcatcttgttgttgatcaagtta 843

                                                                       
Query: 275 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 334
           |||||||| || ||||| |||||||| ||||| || |||||||||| |||||||||||| 
Sbjct: 842 tggagagcaattacacttcggataagtgaagatagatatatgaccaacatcatatcattc 783

                     
Query: 335 gttttcactg 344
           ||||||||||
Sbjct: 782 gttttcactg 773
to top
>ref|NM_111962.3| Arabidopsis thaliana unknown protein AT3G11270 mRNA, complete cds
          Length = 1417

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 215  ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 274
            ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 1001 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 942

                                                                        
Query: 275  tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 334
            ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 941  tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 882

                                  
Query: 335  gttttcactgcaaaggctttaa 356
            ||||| ||||||||||||||||
Sbjct: 881  gtttttactgcaaaggctttaa 860
to top
>gb|AY258412.1| Arabidopsis thaliana 26S proteasome subunit RPN8b (RPN8b) mRNA,
           partial cds
          Length = 930

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                       
Query: 215 ggcttcgaatcctcggccttctcatgctccttgtttagcatcttgttgttgatcaaattg 274
           ||||| || ||||| || || ||||| ||||| || | || |||||||||||||||| ||
Sbjct: 902 ggctttgagtcctctgctttttcatgttccttattcaacaacttgttgttgatcaaactg 843

                                                                       
Query: 275 tggagagcgatgacactccggataagggaagacaggtatatgaccagcatcatatcattt 334
           ||||| ||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||
Sbjct: 842 tggagggcgattacacttcggataagcgaagaaaggtagattacgagcatcatgtcattt 783

                                 
Query: 335 gttttcactgcaaaggctttaa 356
           ||||| ||||||||||||||||
Sbjct: 782 gtttttactgcaaaggctttaa 761
to top
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                         
Query: 256   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 315
             |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 26367 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 26308

                                            
Query: 316   gaccagcatcatatcatttgttttcactgca 346
             ||||| ||||||||| |||||||| ||||||
Sbjct: 26307 gaccaacatcatatcgtttgttttaactgca 26277



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 201   taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 257
             |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 26517 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 26461



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                         
Query: 342   ctgcaaaggctttaatgagctcatttacgttgagattggggagcagattaaacacatcct 401
             |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 26181 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaaacacatcct 26122

              
Query: 402   g 402
             |
Sbjct: 26121 g 26121



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 54/58 (93%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                       
Query: 399   cctgcaagtggtacaaaaatctcgtggttcagtgggagctttcccttcaattacaaga 456
             |||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||
Sbjct: 25544 cctgcaagtggtac-aaaatctcatgattcagtgggagc-ttcccttcaattacaaga 25489



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                         
Query: 6     agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
             |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 26698 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 26640

                   
Query: 65    tgtaaa 70
             ||||||
Sbjct: 26639 tgtaaa 26634
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Minus

                                                                            
Query: 256      cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 315
                |||||| |||||||| || ||||| |||||||||||||||||||| ||||||| ||||||
Sbjct: 33814468 cttgttattgatcaagttatggagtgcgatgacactccggataagagaagacaagtatat 33814409

                                               
Query: 316      gaccagcatcatatcatttgttttcactgca 346
                ||||| ||||||||| |||||||| ||||||
Sbjct: 33814408 gaccaacatcatatcgtttgttttaactgca 33814378



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                         
Query: 201      taggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatct 257
                |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 33814618 taggtatggcggttggcttcgaatcctcggctttctcatgctccttgtttagcatct 33814562



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 58/61 (95%)
 Strand = Plus / Minus

                                                                            
Query: 342      ctgcaaaggctttaatgagctcatttacgttgagattggggagcagattaaacacatcct 401
                |||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 33814282 ctgcaaaggctttaataagctcgtttacattgagattggggagcagattaaacacatcct 33814223

                 
Query: 402      g 402
                |
Sbjct: 33814222 g 33814222



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 54/58 (93%), Gaps = 2/58 (3%)
 Strand = Plus / Minus

                                                                          
Query: 399      cctgcaagtggtacaaaaatctcgtggttcagtgggagctttcccttcaattacaaga 456
                |||||||||||||| |||||||| || |||||||||||| ||||||||||||||||||
Sbjct: 33813645 cctgcaagtggtac-aaaatctcatgattcagtgggagc-ttcccttcaattacaaga 33813590



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 58/66 (87%), Gaps = 2/66 (3%)
 Strand = Plus / Minus

                                                                            
Query: 6        agctcacagaatgtaaggttttgtcgttgacctcgtcgcacatgaagtaaacatc-aaag 64
                |||||||||||||||| | |||| |||||||||  ||| ||||||| |||||||| ||||
Sbjct: 33814799 agctcacagaatgtaaag-tttgccgttgaccttatcgtacatgaaataaacatcgaaag 33814741

                      
Query: 65       tgtaaa 70
                ||||||
Sbjct: 33814740 tgtaaa 33814735
to top
>gb|AY639600.1| Lycopersicon pimpinellifolium orion Hcr9 gene cluster, complete
             sequence
          Length = 28951

 Score =  103 bits (52), Expect = 5e-19
 Identities = 82/92 (89%)
 Strand = Plus / Minus

                                                                         
Query: 256   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 315
             ||||||||||||||| || |||||||| || ||||| |||||||| ||||| || |||||
Sbjct: 28123 cttgttgttgatcaagttatggagagcaattacacttcggataagtgaagatagatatat 28064

                                             
Query: 316   gaccagcatcatatcatttgttttcactgcaa 347
             ||||| |||||||||||| |||||||||||||
Sbjct: 28063 gaccaacatcatatcattcgttttcactgcaa 28032
to top
>gb|AY230839.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-1 allele, complete cds
          Length = 1314

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                       
Query: 202 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 975 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 916

                                                                       
Query: 262 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
           ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 915 gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 856

                                  
Query: 322 catcatatcatttgttttcactg 344
           |||||| ||||||||||||||||
Sbjct: 855 catcatgtcatttgttttcactg 833
to top
>gb|AY087393.1| Arabidopsis thaliana clone 34868 mRNA, complete sequence
          Length = 1368

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 202  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 262  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 925

                                   
Query: 322  catcatatcatttgttttcactg 344
            |||||| ||||||||||||||||
Sbjct: 924  catcatgtcatttgttttcactg 902
to top
>gb|U54560.1|ATU54560 Arabidopsis thaliana putative 26S proteasome subunit athMOV34 mRNA,
            complete cds
          Length = 1357

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 119/143 (83%)
 Strand = Plus / Minus

                                                                        
Query: 202  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1006 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 947

                                                                        
Query: 262  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
            ||||||||| |||||||| || || ||||||||||| ||||| || || || || || ||
Sbjct: 946  gttgatcaagttgtggagcgcaattacactccggatgagggatgatagatagataacgag 887

                                   
Query: 322  catcatatcatttgttttcactg 344
            |||||| ||||||||||||||||
Sbjct: 886  catcatgtcatttgttttcactg 864
to top
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete
             sequence
          Length = 103517

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 78/89 (87%)
 Strand = Plus / Minus

                                                                         
Query: 256   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 315
             |||||||||||||||| ||||||| ||||| ||||| |||||||| ||||| ||||| ||
Sbjct: 68309 cttgttgttgatcaaactgtggagggcgattacacttcggataagcgaagaaaggtagat 68250

                                          
Query: 316   gaccagcatcatatcatttgttttcactg 344
              || |||||||| ||||||||||| ||||
Sbjct: 68249 tacgagcatcatgtcatttgtttttactg 68221
to top
>ref|NM_120660.2| Arabidopsis thaliana ATHMOV34 AT5G05780 (ATHMOV34) mRNA, complete cds
          Length = 1372

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 202  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1044 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 985

                                                                        
Query: 262  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 984  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 925

                                 
Query: 322  catcatatcatttgttttcac 342
            |||||| ||||||||||||||
Sbjct: 924  catcatgtcatttgttttcac 904
to top
>gb|AY230840.1| Arabidopsis thaliana 26S proteasome subunit RPN8a (RPN8a) mRNA,
           RPN8a-2 allele, complete cds
          Length = 932

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 202 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 262 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 322 catcatatcatttgttttcac 342
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
to top
>dbj|AK222016.1| Arabidopsis thaliana mRNA for 26S proteasome regulatory subunit
           S12, complete cds, clone: RAFL22-69-D21
          Length = 531

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 202 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 322 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 263

                                                                       
Query: 262 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 262 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 203

                                
Query: 322 catcatatcatttgttttcac 342
           |||||| ||||||||||||||
Sbjct: 202 catcatgtcatttgttttcac 182
to top
>gb|AF378878.1|AF378878 Arabidopsis thaliana AT5g05780/MJJ3_19 mRNA, complete cds
          Length = 1367

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 202  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1043 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 984

                                                                        
Query: 262  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 983  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 924

                                 
Query: 322  catcatatcatttgttttcac 342
            |||||| ||||||||||||||
Sbjct: 923  catcatgtcatttgttttcac 903
to top
>emb|BX830010.1|CNS0A09A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB52ZG12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1302

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                        
Query: 202  aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
            |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 1023 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 964

                                                                        
Query: 262  gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
            ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 963  gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 904

                                 
Query: 322  catcatatcatttgttttcac 342
            |||||| ||||||||||||||
Sbjct: 903  catcatgtcatttgttttcac 883
to top
>gb|BT002610.1| Arabidopsis thaliana At5g05780/MJJ3_19 mRNA, complete cds
          Length = 927

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 116/141 (82%)
 Strand = Plus / Minus

                                                                       
Query: 202 aggtatggcggctggcttcgaatcctcggccttctcatgctccttgtttagcatcttgtt 261
           |||||||||  | ||||| || ||||| || || ||||| |||||||| || | ||||||
Sbjct: 915 aggtatggccacaggctttgagtcctctgctttttcatgttccttgttcagtaacttgtt 856

                                                                       
Query: 262 gttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatatgaccag 321
           ||||||||| |||||||| || || |||||||| || ||||| || || || || || ||
Sbjct: 855 gttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagataacgag 796

                                
Query: 322 catcatatcatttgttttcac 342
           |||||| ||||||||||||||
Sbjct: 795 catcatgtcatttgttttcac 775
to top
>emb|BX833880.1|CNS09Z77 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL81ZD09 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1265

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Minus

                                                                       
Query: 236 tcatgctccttgtttagcatcttgttgttgatcaaattgtggagagcgatgacactccgg 295
           ||||| |||||||| || | ||||||||||||||| |||||||| || || |||||||| 
Sbjct: 986 tcatgttccttgttcagtaacttgttgttgatcaagttgtggagcgcaattacactccga 927

                                                          
Query: 296 ataagggaagacaggtatatgaccagcatcatatcatttgttttcac 342
           || ||||| || || || || || |||||||| ||||||||||||||
Sbjct: 926 atgagggatgatagatagataacgagcatcatgtcatttgttttcac 880
to top
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3
          Length = 87835

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 78/91 (85%)
 Strand = Plus / Minus

                                                                         
Query: 256   cttgttgttgatcaaattgtggagagcgatgacactccggataagggaagacaggtatat 315
             ||||||||||||||| |||||||| || || |||||||| || ||||| || || || ||
Sbjct: 58752 cttgttgttgatcaagttgtggagcgcaattacactccgaatgagggatgatagatagat 58693

                                            
Query: 316   gaccagcatcatatcatttgttttcactgca 346
              || |||||||| ||||||||||||||||||
Sbjct: 58692 aacgagcatcatgtcatttgttttcactgca 58662
to top
>ref|XM_804367.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053503593.30) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 230 gccttctcatgctccttgttta 251
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
to top
>ref|XM_811105.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506127.150) partial mRNA
          Length = 2574

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 230 gccttctcatgctccttgttta 251
           ||||||||||||||||||||||
Sbjct: 992 gccttctcatgctccttgttta 971
to top
>ref|XM_749538.1| Aspergillus fumigatus Af293 nuclear exosome complex 3'-5'
           exonuclease subunit (Afu3g09880) partial mRNA
          Length = 2295

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 24  ttttgtcgttgacctcgtcgc 44
           |||||||||||||||||||||
Sbjct: 161 ttttgtcgttgacctcgtcgc 181
to top
>gb|AY106142.1| Zea mays PCO072430 mRNA sequence
          Length = 554

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 47  atgaagtaaacatcaaagtgtaaattgaaggtcaagacacttggt 91
           ||||| ||||||||||| |||  ||| |||||||||||| |||||
Sbjct: 371 atgaaataaacatcaaaatgtccattcaaggtcaagacaattggt 327
to top
>ref|XM_638353.1| Dictyostelium discoideum hypothetical protein (DDB0202525), partial
            mRNA
          Length = 2580

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 245  ttgtttagcatcttgttgttgatc 268
            ||||||| ||||||||||||||||
Sbjct: 1212 ttgtttatcatcttgttgttgatc 1189
to top
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence
          Length = 182182

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tgtccacggtttcttctgcc 132
             ||||||||||||||||||||
Sbjct: 83054 tgtccacggtttcttctgcc 83073
to top
>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 517 tgtccacggtttcttctgcc 536
to top
>gb|AE006083.1| Pasteurella multocida subsp. multocida str. Pm70 section 50 of 204 of
            the complete genome
          Length = 12365

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 394  cacatcctgcaagtggtacaaaaa 417
            |||||||||||||||||| |||||
Sbjct: 8084 cacatcctgcaagtggtataaaaa 8061
to top
>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    tttcttctgcccgtgctggg 141
              ||||||||||||||||||||
Sbjct: 220053 tttcttctgcccgtgctggg 220072
to top
>gb|AC166654.1| Mus musculus BAC clone RP23-426B21 from chromosome 17, complete
             sequence
          Length = 185609

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tttcttctgcccgtgctggg 141
             ||||||||||||||||||||
Sbjct: 77390 tttcttctgcccgtgctggg 77409
to top
>emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chromosome 9, complete
              sequence
          Length = 164774

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     taaacatcaaagtgtaaatt 72
              ||||||||||||||||||||
Sbjct: 143970 taaacatcaaagtgtaaatt 143951
to top
>emb|X16990.1|ANFACA Aspergillus nidulans facA (= acuA) gene for acetyl-coenzyme A
           synthetase (EC 6.2.1.1)
          Length = 3360

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 424 ggttcagtgggagctttccc 443
           ||||||||||||||||||||
Sbjct: 123 ggttcagtgggagctttccc 104
to top
>gb|AF038842.1| Drosophila melanogaster midline fasciclin precursor (mfas) mRNA,
           complete cds
          Length = 2967

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 785 tgtccacggtttcttctgcc 766
to top
>gb|AC009721.9| Homo sapiens 12q24.1-116.6-118.9 BAC RP11-129O9 (Roswell Park Cancer
             Institute Human BAC Library) complete sequence
          Length = 166765

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    agtaaacatcaaagtgtaaa 70
             ||||||||||||||||||||
Sbjct: 68724 agtaaacatcaaagtgtaaa 68743
to top
>ref|NM_176478.1| Drosophila melanogaster midline fasciclin CG3359-RJ, transcript
           variant J (mfas), mRNA
          Length = 2962

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 780 tgtccacggtttcttctgcc 761
to top
>ref|NM_176477.1| Drosophila melanogaster midline fasciclin CG3359-RM, transcript
           variant M (mfas), mRNA
          Length = 2789

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 607 tgtccacggtttcttctgcc 588
to top
>ref|NM_176476.1| Drosophila melanogaster midline fasciclin CG3359-RG, transcript
           variant G (mfas), mRNA
          Length = 2767

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 585 tgtccacggtttcttctgcc 566
to top
>ref|NM_176475.1| Drosophila melanogaster midline fasciclin CG3359-RF, transcript
           variant F (mfas), mRNA
          Length = 3163

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 981 tgtccacggtttcttctgcc 962
to top
>ref|NM_176474.1| Drosophila melanogaster midline fasciclin CG3359-RO, transcript
           variant O (mfas), mRNA
          Length = 2764

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 582 tgtccacggtttcttctgcc 563
to top
>ref|NM_176473.1| Drosophila melanogaster midline fasciclin CG3359-RE, transcript
           variant E (mfas), mRNA
          Length = 2786

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 604 tgtccacggtttcttctgcc 585
to top
>ref|NM_176472.1| Drosophila melanogaster midline fasciclin CG3359-RK, transcript
           variant K (mfas), mRNA
          Length = 2912

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 730 tgtccacggtttcttctgcc 711
to top
>ref|NM_176471.1| Drosophila melanogaster midline fasciclin CG3359-RI, transcript
           variant I (mfas), mRNA
          Length = 2890

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 708 tgtccacggtttcttctgcc 689
to top
>ref|NM_176470.1| Drosophila melanogaster midline fasciclin CG3359-RP, transcript
           variant P (mfas), mRNA
          Length = 2717

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 535 tgtccacggtttcttctgcc 516
to top
>ref|NM_176469.1| Drosophila melanogaster midline fasciclin CG3359-RL, transcript
           variant L (mfas), mRNA
          Length = 2771

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 589 tgtccacggtttcttctgcc 570
to top
>ref|NM_176468.1| Drosophila melanogaster midline fasciclin CG3359-RD, transcript
           variant D (mfas), mRNA
          Length = 3091

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 909 tgtccacggtttcttctgcc 890
to top
>ref|NM_176467.1| Drosophila melanogaster midline fasciclin CG3359-RN, transcript
           variant N (mfas), mRNA
          Length = 2692

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 510 tgtccacggtttcttctgcc 491
to top
>ref|NM_176466.1| Drosophila melanogaster midline fasciclin CG3359-RH, transcript
           variant H (mfas), mRNA
          Length = 2714

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 532 tgtccacggtttcttctgcc 513
to top
>ref|NM_169444.1| Drosophila melanogaster midline fasciclin CG3359-RB, transcript
           variant B (mfas), mRNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 513 tgtccacggtttcttctgcc 494
to top
>gb|AC018509.6| Homo sapiens chromosome 10 clone RP11-307B23, complete sequence
          Length = 162877

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tagagctcacagaatgtaag 22
              ||||||||||||||||||||
Sbjct: 120164 tagagctcacagaatgtaag 120145
to top
>ref|NM_079600.2| Drosophila melanogaster midline fasciclin CG3359-RC, transcript
           variant C (mfas), mRNA
          Length = 2966

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 784 tgtccacggtttcttctgcc 765
to top
>gb|AY069094.1| Drosophila melanogaster GH11519 full length cDNA
          Length = 2695

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tgtccacggtttcttctgcc 132
           ||||||||||||||||||||
Sbjct: 495 tgtccacggtttcttctgcc 476
to top
>emb|BX276188.11| Zebrafish DNA sequence from clone CH211-245A19, complete sequence
          Length = 177660

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tcatttgttttcactgcaaa 348
             ||||||||||||||||||||
Sbjct: 22248 tcatttgttttcactgcaaa 22267
to top
>gb|AC084456.1|AC084456 Caenorhabditis briggsae cosmid CB029P18, complete sequence
          Length = 87408

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 315 tgaccagcatcatatcatttgttt 338
           |||| |||||||||||||||||||
Sbjct: 44  tgacgagcatcatatcatttgttt 21
to top
>gb|AC084447.1|AC084447 Caenorhabditis briggsae cosmid CB019G12, complete sequence
          Length = 88839

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 315   tgaccagcatcatatcatttgttt 338
             |||| |||||||||||||||||||
Sbjct: 88650 tgacgagcatcatatcatttgttt 88627
to top
>ref|XM_320392.2| Anopheles gambiae str. PEST ENSANGP00000013949
           (ENSANGG00000011460), partial mRNA
          Length = 977

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 256 cttgttgttgatcaaattgtggagagcgatga 287
           |||||||||||||| |||||| || |||||||
Sbjct: 968 cttgttgttgatcagattgtgcagcgcgatga 937
to top
>gb|AC005720.6|AC005720 Drosophila melanogaster, chromosome 3L, region 79F1-80A2, BAC clone
              BACR48E05, complete sequence
          Length = 190390

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    gatgacactccggataaggg 302
              ||||||||||||||||||||
Sbjct: 132453 gatgacactccggataaggg 132434
to top
>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the
            complete sequence
          Length = 226075

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 113  tgtccacggtttcttctgcc 132
            ||||||||||||||||||||
Sbjct: 9478 tgtccacggtttcttctgcc 9497
to top
>gb|AE003599.2| Drosophila melanogaster chromosome 3L, section 80 of 83 of the complete
              sequence
          Length = 250029

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gatgacactccggataaggg 302
              ||||||||||||||||||||
Sbjct: 103841 gatgacactccggataaggg 103860
to top
>emb|AL732559.9| Mouse DNA sequence from clone RP23-9A5 on chromosome 2, complete
            sequence
          Length = 167364

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 241  ctccttgtttagcatcttgt 260
            ||||||||||||||||||||
Sbjct: 6980 ctccttgtttagcatcttgt 6999
to top
>emb|AL731709.19| Mouse DNA sequence from clone RP23-316M14 on chromosome 2, complete
             sequence
          Length = 211034

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 69    aattgaaggtcaagacacttggta 92
             ||||||| ||||||||||||||||
Sbjct: 51067 aattgaaagtcaagacacttggta 51044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,639,459
Number of Sequences: 3902068
Number of extensions: 3639459
Number of successful extensions: 65638
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65491
Number of HSP's gapped (non-prelim): 131
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top