>HGD_LEGPL (Q5WX50) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 416

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 341 HTPLRAHCWHINYLPFLSYLSPFKTYTT 258
           H+PL    WH NY P+   LS F T  T
Sbjct: 243 HSPLNVVAWHGNYAPYCYDLSLFNTINT 270

>HGD_LEGPH (Q9S4T0) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 416

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 341 HTPLRAHCWHINYLPFLSYLSPFKTYTT 258
           H+PL    WH NY P+   LS F T  T
Sbjct: 243 HSPLNVVAWHGNYAPYCYDLSLFNTINT 270

>HGD_LEGPA (Q5X5S2) Homogentisate 1,2-dioxygenase (EC 1.13.11.5)|
           (Homogentisicase) (Homogentisate oxygenase)
           (Homogentisic acid oxidase)
          Length = 416

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 341 HTPLRAHCWHINYLPFLSYLSPFKTYTT 258
           H+PL    WH NY P+   LS F T  T
Sbjct: 243 HSPLNVVAWHGNYAPYCYDLSLFNTINT 270

>RM47_MOUSE (Q8K2Y7) 39S ribosomal protein L47, mitochondrial precursor (L47mt)|
           (MRP-L47)
          Length = 252

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 19/42 (45%), Positives = 25/42 (59%)
 Frame = -1

Query: 216 ILLRIRMHSCRWLVKKSLEKGKEKIAQIRKCEKITQERKSEN 91
           I LRI  H+     K+SL+K KEKI    K   ++QERKS +
Sbjct: 211 IRLRIEKHARIEARKRSLQKKKEKILH-AKFPHLSQERKSSS 251


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,315,545
Number of Sequences: 219361
Number of extensions: 818550
Number of successful extensions: 1483
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)