| Clone Name | rbags19d22 |
|---|---|
| Clone Library Name | barley_pub |
>CASR_RAT (P48442) Extracellular calcium-sensing receptor precursor (CaSR)| (Parathyroid Cell calcium-sensing receptor) Length = 1079 Score = 30.8 bits (68), Expect = 3.1 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = -1 Query: 221 LLMVFDTYVPEDFHSETWPLVNGLPLQKCLIFVYCIVRQLYLNIKLY 81 +L+VF+ +P FH + W GL LQ L+F+ ++ L I LY Sbjct: 702 VLLVFEAKIPTSFHRKWW----GLNLQFLLVFLCTFMQILICIIWLY 744
>DCHS_BOVIN (Q5EA83) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 658 Score = 30.0 bits (66), Expect = 5.3 Identities = 21/63 (33%), Positives = 30/63 (47%) Frame = +2 Query: 239 SVTTLFRFHDQMLADQELPQEKAAICSANLGSQPSQTCPSPLGWNTLHQTRRAHRWMDHL 418 +VT+ F D +L D L Q+ A + + SQ + PSP G N + QTR + Sbjct: 449 TVTSQFTTRDDILRDWNLIQDAATL----ILSQHCTSQPSPQGANLILQTRGPRALAKEM 504 Query: 419 SSP 427 S P Sbjct: 505 SFP 507
>ICP4_GAHVG (Q02362) Trans-acting transcriptional activator protein ICP4| (Immediate-early protein IE175) Length = 1415 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 Query: 328 GQPALPNMPISTWLEHATPNTTSPPVDGP 414 GQP P +P+ W +T SPP GP Sbjct: 52 GQPMFPPLPVPDWNNPSTDWRPSPPRSGP 80
>CASR_MOUSE (Q9QY96) Extracellular calcium-sensing receptor precursor (CaSR)| (Parathyroid Cell calcium-sensing receptor) Length = 1079 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 Query: 221 LLMVFDTYVPEDFHSETWPLVNGLPLQKCLIFVYCIVRQLYLNIKLY 81 +L+VF+ +P FH + W GL LQ L+F+ ++ + I LY Sbjct: 702 VLLVFEAKIPTSFHRKWW----GLNLQFLLVFLCTFMQIVICIIWLY 744
>CASR_HUMAN (P41180) Extracellular calcium-sensing receptor precursor (CaSR)| (Parathyroid Cell calcium-sensing receptor) Length = 1078 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -1 Query: 221 LLMVFDTYVPEDFHSETWPLVNGLPLQKCLIFVYCIVRQLYLNIKLY 81 +L+VF+ +P FH + W GL LQ L+F+ ++ + I LY Sbjct: 702 VLLVFEAKIPTSFHRKWW----GLNLQFLLVFLCTFMQIVICVIWLY 744 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,969,588 Number of Sequences: 219361 Number of extensions: 2041573 Number of successful extensions: 5178 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 4998 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5175 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)