| Clone Name | rbags19d21 |
|---|---|
| Clone Library Name | barley_pub |
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 241 bits (615), Expect = 1e-63 Identities = 114/130 (87%), Positives = 125/130 (96%) Frame = -3 Query: 592 RMPISSDLNNPRNFITKISRYDKVVNIPNSMTMLDELLPISVEMAKRNLRGIWNFTNPGV 413 RMPISSDLNNPRNFITKISRY+KVVNIPNSMT+LDELLPIS+EMAKRNLRGIWNFTNPGV Sbjct: 534 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWNFTNPGV 593 Query: 412 VSHNEILEMYKKYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSL 233 VSHNEILEMYK Y++P +KW+NF LEEQAKVIVAPRSNNEMD AKL +EFPE+LSIKDSL Sbjct: 594 VSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEMLSIKDSL 653 Query: 232 IKYVFEPNRK 203 IKYVFEPN++ Sbjct: 654 IKYVFEPNKR 663
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 237 bits (604), Expect = 2e-62 Identities = 112/130 (86%), Positives = 125/130 (96%) Frame = -3 Query: 592 RMPISSDLNNPRNFITKISRYDKVVNIPNSMTMLDELLPISVEMAKRNLRGIWNFTNPGV 413 RMPISSDLNNPRNFITKISRY+KVVNIPNSMT+LDELLPIS+EMAKRNL+GIWNFTNPGV Sbjct: 539 RMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGV 598 Query: 412 VSHNEILEMYKKYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSL 233 VSHNEILEMY+ Y++P +KW NFTLEEQAKVIVAPRSNNEMDA+KLK+EFPELLSIK+SL Sbjct: 599 VSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPELLSIKESL 658 Query: 232 IKYVFEPNRK 203 IKY + PN+K Sbjct: 659 IKYAYGPNKK 668
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 233 bits (595), Expect = 2e-61 Identities = 109/130 (83%), Positives = 125/130 (96%) Frame = -3 Query: 592 RMPISSDLNNPRNFITKISRYDKVVNIPNSMTMLDELLPISVEMAKRNLRGIWNFTNPGV 413 RMPISSDLNNPRNFITKISRY+KVV+IPNSMT+LDELLPIS+EMAKRNLRGIWNFTNPGV Sbjct: 537 RMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGV 596 Query: 412 VSHNEILEMYKKYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSL 233 VSHNEILEMYK Y++P +KW+NFT+EEQAKVIVA RSNNEMD +KL +EFPE+LSIK+SL Sbjct: 597 VSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEMLSIKESL 656 Query: 232 IKYVFEPNRK 203 +KYVFEPN++ Sbjct: 657 LKYVFEPNKR 666
>KLEG1_ECOLI (Q52282) Putative protein kleG| Length = 87 Score = 31.2 bits (69), Expect = 2.4 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Frame = -1 Query: 522 W*TSQTA*LCWMSFCRFQLRWQKGT-CGASGTSPILVWSATMRFWRCTRSTWIPATSGQT 346 W +S+T C C + RW+ G C + T P R R+ WIP T + Sbjct: 20 WPSSRTGWACLPRRCASRRRWRAGRPCSTTRTGP-----------RFARARWIPTTGDRR 68 Query: 345 SRWKNRPR 322 R R R Sbjct: 69 GRRPQRHR 76
>SERB_YEAST (P42941) Phosphoserine phosphatase (EC 3.1.3.3) (PSP)| (O-phosphoserine phosphohydrolase) (PSPase) Length = 309 Score = 30.0 bits (66), Expect = 5.3 Identities = 23/93 (24%), Positives = 43/93 (46%) Frame = -3 Query: 529 DKVVNIPNSMTMLDELLPISVEMAKRNLRGIWNFTNPGVVSHNEILEMYKKYMDPSYKWT 350 +K+ N+ +S +D + +SV+ R + ++ F + + E++E+ Y Sbjct: 65 NKLTNVIDSHNDVDVI--VSVDNEYRQAKKLFVFDMDSTLIYQEVIELIAAYAG------ 116 Query: 349 NFTLEEQAKVIVAPRSNNEMDAAKLKREFPELL 251 +EEQ I NNE+D + RE +LL Sbjct: 117 ---VEEQVHEITERAMNNELDFKESLRERVKLL 146
>MPG1_SCHPO (O74484) Probable mannose-1-phosphate guanyltransferase (EC| 2.7.7.13) (GTP-mannose-1-phosphate guanylyltransferase) (GDP-mannose pyrophosphorylase) Length = 363 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%) Frame = -3 Query: 550 ITKI---SRYDKVVNIPNSMTMLDELLPISVEMAKRNLRGIWNFTNPGVVSHNE 398 +TK+ S+Y VV+ PNS ++++ + VE + G NP V+ E Sbjct: 135 VTKVEEPSKYGVVVHYPNSESLIERFVEKPVEFVSNRINGGIYILNPSVLDRIE 188
>PXK_MOUSE (Q8BX57) PX domain-containing protein kinase-like protein| (Modulator of Na,K-ATPase) (MONaKA) Length = 582 Score = 29.3 bits (64), Expect = 9.0 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 12/126 (9%) Frame = -3 Query: 541 ISRYDKVVNIPNSMTMLDELLPISVEMAKRNL---------RGIWNFTNPGVVSHNEIL- 392 + RY + NS+ + LP+ + N+ RG+ N+ N V+ N +L Sbjct: 53 VRRYSDFDLLNNSLQITGLSLPLPPKKLIGNMDREFIAERQRGLQNYLN--VIMANHVLS 110 Query: 391 --EMYKKYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSLIKYVF 218 E+ KK++DP+ N+T +V + RS + + + ++ + K L+K Sbjct: 111 NCELLKKFLDPNNYSANYTEIALQQVSMFFRSEPKWEVVEPLKDIGWRIRKKYFLMKIKN 170 Query: 217 EPNRKV 200 +P ++ Sbjct: 171 QPKERL 176
>PXK_HUMAN (Q7Z7A4) PX domain-containing protein kinase-like protein| (Modulator of Na,K-ATPase) (MONaKA) Length = 578 Score = 29.3 bits (64), Expect = 9.0 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 12/126 (9%) Frame = -3 Query: 541 ISRYDKVVNIPNSMTMLDELLPISVEMAKRNL---------RGIWNFTNPGVVSHNEIL- 392 + RY + NS+ + LP+ + N+ +G+ N+ N V++ N IL Sbjct: 53 VRRYSDFDLLNNSLQIAGLSLPLPPKKLIGNMDREFIAERQKGLQNYLN--VITTNHILS 110 Query: 391 --EMYKKYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSLIKYVF 218 E+ KK++DP+ N+T +V + RS + + + ++ + K L+K Sbjct: 111 NCELVKKFLDPNNYSANYTEIALQQVSMFFRSEPKWEVVEPLKDIGWRIRKKYFLMKIKN 170 Query: 217 EPNRKV 200 +P ++ Sbjct: 171 QPKERL 176
>YR104_MIMIV (Q5UPI0) Putative transposase R104| Length = 545 Score = 29.3 bits (64), Expect = 9.0 Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 2/65 (3%) Frame = -3 Query: 379 KYMDPSYKWTNFTLEEQAKVIVAPRSNNEMDAAKLKREFPELLSIKDSLIKYVFEPN--R 206 KY+ +Y N + +Q K P+SNN KL +LL I+DS K E N R Sbjct: 43 KYITFNYYSNNVPINDQLKFKDIPQSNNTDKKNKL---MDKLLKIEDSRYKKDIESNKTR 99 Query: 205 KVPAT 191 K+ T Sbjct: 100 KIKLT 104 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 89,840,368 Number of Sequences: 219361 Number of extensions: 1977682 Number of successful extensions: 5612 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5394 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5608 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)