>DHX15_ARATH (O22899) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase (EC 3.6.1.-)
          Length = 729

 Score =  208 bits (530), Expect = 8e-54
 Identities = 94/111 (84%), Positives = 104/111 (93%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRN 405
           YVNIRKAML+GYFMQVAHL RTGHYLTVKDNQVVHLHPSNC+DHKPEWVIYNEYVLTTRN
Sbjct: 617 YVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTTRN 676

Query: 404 FIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRERERAASRN 252
           FIRTVTDIRGEWL+D+A  YYDL+NFP+CEAKR LE+L+ KRERE+  S+N
Sbjct: 677 FIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYKKREREKNESKN 727

>DHX15_MOUSE (O35286) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15)
          Length = 795

 Score =  171 bits (433), Expect = 1e-42
 Identities = 74/98 (75%), Positives = 89/98 (90%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRN 405
           Y+NIRKA+++GYFMQVAHL RTGHYLTVKDNQVV LHPS  +DHKPEWV+YNE+VLTT+N
Sbjct: 686 YINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKN 745

Query: 404 FIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERL 291
           +IRT TDI+ EWL+ IAPQYYD++NFP CEAKR L+R+
Sbjct: 746 YIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783

>DHX15_HUMAN (O43143) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase DHX15 (EC 3.6.1.-) (DEAH box protein 15)
           (ATP-dependent RNA helicase #46)
          Length = 795

 Score =  171 bits (433), Expect = 1e-42
 Identities = 74/98 (75%), Positives = 89/98 (90%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRN 405
           Y+NIRKA+++GYFMQVAHL RTGHYLTVKDNQVV LHPS  +DHKPEWV+YNE+VLTT+N
Sbjct: 686 YINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKN 745

Query: 404 FIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERL 291
           +IRT TDI+ EWL+ IAPQYYD++NFP CEAKR L+R+
Sbjct: 746 YIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRI 783

>DHX15_CAEEL (Q20875) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase F56D2.6 (EC 3.6.1.-)
          Length = 739

 Score =  157 bits (397), Expect = 2e-38
 Identities = 69/104 (66%), Positives = 87/104 (83%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRN 405
           Y+NIRKA+++G+FMQVAHL R+GHY+TVKDNQ+V+LHPS  +DHKPEW +YNE+VLTT+N
Sbjct: 630 YLNIRKALVAGFFMQVAHLERSGHYVTVKDNQLVNLHPSTVLDHKPEWALYNEFVLTTKN 689

Query: 404 FIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRER 273
           FIRTVTD+R EWL+ IAPQYYDL NFP  + KR L  +    +R
Sbjct: 690 FIRTVTDVRPEWLLQIAPQYYDLDNFPDGDTKRKLTTVMQTLQR 733

>PRP43_YEAST (P53131) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43|
           (EC 3.6.1.-) (Helicase JA1)
          Length = 767

 Score =  123 bits (309), Expect = 3e-28
 Identities = 62/104 (59%), Positives = 78/104 (75%), Gaps = 2/104 (1%)
 Frame = -1

Query: 578 NIRKAMLSGYFMQVAHLXRTGH--YLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTRN 405
           NIRKA+ SG+FMQVA   R+G   Y+TVKDNQ V +HPS  + H  EWVIYNE+VLT++N
Sbjct: 647 NIRKALASGFFMQVAK-KRSGAKGYITVKDNQDVLIHPSTVLGHDAEWVIYNEFVLTSKN 705

Query: 404 FIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRER 273
           +IRTVT +R EWLI+IAP YYDL+NF   + K  LER+  K +R
Sbjct: 706 YIRTVTSVRPEWLIEIAPAYYDLSNFQKGDVKLSLERIKEKVDR 749

>DHX15_SCHPO (O42945) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase prp43 (EC 3.6.1.-)
          Length = 735

 Score =  121 bits (303), Expect = 2e-27
 Identities = 60/112 (53%), Positives = 82/112 (73%), Gaps = 2/112 (1%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVAHLXRTG-HYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTR 408
           YVNIR+A++SG+FMQVA     G +Y+T+KDNQVV LHPS  +   PEWV+YNE+VLTT+
Sbjct: 623 YVNIRRALVSGFFMQVAKKSANGKNYVTMKDNQVVSLHPSCGLSVTPEWVVYNEFVLTTK 682

Query: 407 NFIRTVTDIRGEWLIDIAPQYYDLTNFP-SCEAKRVLERLHNKRERERAASR 255
           +FIR VT IR EWLI++AP YYDL +F  + E K  L++++    R +  +R
Sbjct: 683 SFIRNVTAIRPEWLIELAPNYYDLDDFDNNKEVKSALQKVYQMAARSKKNAR 734

>DHX16_PANTR (Q7YR39) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase|
            DHX16 (EC 3.6.1.-) (DEAH-box protein 16) (ATP-dependent
            RNA helicase #3)
          Length = 1044

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -1

Query: 584  YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHP-SNCMDHKPEWVIYNEYVLTTR 408
            Y+ +RKA+ +GYF   A L R+G Y TVK  Q V +HP S+  + +P W++Y+E VLTT+
Sbjct: 939  YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTK 997

Query: 407  NFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRE 276
             F+R V +I   WL+++AP YY         AK++ +++   RE
Sbjct: 998  EFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1041

>DHX16_HUMAN (O60231) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase|
            DHX16 (EC 3.6.1.-) (DEAH-box protein 16) (ATP-dependent
            RNA helicase #3)
          Length = 1041

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
 Frame = -1

Query: 584  YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHP-SNCMDHKPEWVIYNEYVLTTR 408
            Y+ +RKA+ +GYF   A L R+G Y TVK  Q V +HP S+  + +P W++Y+E VLTT+
Sbjct: 936  YIRVRKAITAGYFYHTARLTRSG-YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTK 994

Query: 407  NFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRE 276
             F+R V +I   WL+++AP YY         AK++ +++   RE
Sbjct: 995  EFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKIGKTRE 1038

>DHX16_CAEEL (O45244) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase|
            mog-4 (EC 3.6.1.-) (Sex determination protein mog-4)
            (Masculinization of germ line protein 4)
          Length = 1008

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -1

Query: 581  VNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTRN 405
            + IRKA+ +GYF  V+ L  TGHY TVK     H HP++C+ +  P WV+Y E V T++ 
Sbjct: 902  IKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSKE 961

Query: 404  FIRTVTDIRGEWLIDIAPQYY 342
            F+R +++I   WL+++AP YY
Sbjct: 962  FMREMSEIESGWLLEVAPHYY 982

>DHX8_HUMAN (Q14562) ATP-dependent RNA helicase DHX8 (EC 3.6.1.-) (DEAH box|
            protein 8) (RNA helicase HRH1)
          Length = 1220

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
 Frame = -1

Query: 581  VNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTRN 405
            V ++KA+ SG+F   A       Y T+ D QVV++HPS+ + + +PEWV+Y+E VLTT+ 
Sbjct: 1101 VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE 1160

Query: 404  FIRTVTDIRGEWLIDIAPQYY---DLTNFPSCEAKRVLERLHNKRERERA 264
            ++R VT I   WL++ AP ++   D T     + ++ LE L+N+ E   A
Sbjct: 1161 YMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNA 1210

>CDC28_SCHPO (Q10752) Putative ATP-dependent RNA helicase cdc28 (EC 3.6.1.-)|
          Length = 1055

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 39/84 (46%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGH-YLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTRNF 402
            I+KA+ +GYF   A L R+G  Y TVK NQ V++HPS+ + + KP+ +IY E VLTT+ +
Sbjct: 959  IKKAITAGYFSNAARLDRSGDSYRTVKSNQTVYIHPSSSVAEKKPKVIIYFELVLTTKEY 1018

Query: 401  IRTVTDIRGEWLIDIAPQYYDLTN 330
             R +T+I+ EWL++I+P Y+   N
Sbjct: 1019 CRQITEIQPEWLLEISPHYFKPEN 1042

>DHX35_HUMAN (Q9H5Z1) Probable ATP-dependent RNA helicase DHX35 (EC 3.6.1.-)|
           (DEAH box protein 35)
          Length = 703

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
 Frame = -1

Query: 575 IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM--DHKPEWVIYNEYVLTTRNF 402
           + + ++SG+F   A    TG Y T++D+  +H+HP++ +  +  P WVIYNE + T++ +
Sbjct: 606 VLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYY 665

Query: 401 IRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKR 306
           +R VT I   WL+++AP +Y      S +AKR
Sbjct: 666 MRDVTAIESAWLLELAPHFYQQGTHLSLKAKR 697

>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase|
            mog-5 (EC 3.6.1.-) (Sex determination protein mog-5)
            (Masculinization of germ line protein 5)
          Length = 1200

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 36/102 (35%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSN-CMDHKPEWVIYNEYVLTTRNFI 399
            ++KA+ SG+F   A       Y T+ D Q V++HPS+ C   +PEWV+Y+E V+TT+ ++
Sbjct: 1078 VQKAICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYM 1137

Query: 398  RTVTDIRGEWLIDIAPQYY---DLTNFPSCEAKRVLERLHNK 282
            R VT I  +WL++ AP ++   D T   + +  + ++ L +K
Sbjct: 1138 REVTAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDK 1179

>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase|
            (EC 3.6.1.-)
          Length = 1168

 Score = 75.5 bits (184), Expect = 1e-13
 Identities = 34/105 (32%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
 Frame = -1

Query: 584  YVNIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTR 408
            +  IRKA+ +G+F   A       Y T+ +NQ V++HPS+ +   +P+WVIY++ V+TT+
Sbjct: 1050 FTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHDLVMTTK 1109

Query: 407  NFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRVLERLHNKRER 273
             ++R VT I  +WL+++AP+++ +++      ++  ER+    +R
Sbjct: 1110 EYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDR 1154

>DHX35_PONPY (Q5RBD4) Probable ATP-dependent RNA helicase DHX35 (EC 3.6.1.-)|
           (DEAH box protein 35)
          Length = 720

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 29/80 (36%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
 Frame = -1

Query: 575 IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM--DHKPEWVIYNEYVLTTRNF 402
           + + ++SG+F   A    TG Y T++D+  +H+HP++ +  +  P WVIYNE + T++ +
Sbjct: 606 VLRCIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPPRWVIYNEVIQTSKYY 665

Query: 401 IRTVTDIRGEWLIDIAPQYY 342
           +R VT I   WL+++AP +Y
Sbjct: 666 MRDVTAIESAWLLELAPHFY 685

>PRP16_HUMAN (Q92620) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16|
            (EC 3.6.1.-) (ATP-dependent RNA helicase DHX38) (DEAH box
            protein 38)
          Length = 1227

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNC---MDHKPEWVIYNEYVLTTRN 405
            +RK + + YF Q A L   G Y+ ++     HLHP++    M + P++++Y+E V+TT+ 
Sbjct: 1069 VRKCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKE 1128

Query: 404  FIRTVTDIRGEWLIDIAPQYYDL 336
            +++ VT + GEWL ++ P +Y +
Sbjct: 1129 YMQCVTAVDGEWLAELGPMFYSV 1151

>DHX8_SCHPO (O42643) Putative pre-mRNA-splicing factor ATP-dependent RNA helicase|
            C10F6.02c (EC 3.6.1.-)
          Length = 1168

 Score = 66.6 bits (161), Expect = 5e-11
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHL-XRTGHYLTVKDNQVVHLHPSNCMDHKP-EWVIYNEYVLTTRNF 402
            I +A+ SGYF  VA      G Y T+ +N  V++HPS  +  K  EWVIY+E + T++ +
Sbjct: 1049 ILRALCSGYFTNVAKRDSHEGCYKTIVENAPVYMHPSGVLFGKAAEWVIYHELIQTSKEY 1108

Query: 401  IRTVTDIRGEWLIDIAPQYYDLTN 330
            + TV+ +  +WL+++AP ++   N
Sbjct: 1109 MHTVSTVNPKWLVEVAPTFFKFAN 1132

>PRP22_YEAST (P24384) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22|
            (EC 3.6.1.-)
          Length = 1145

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKP-EWVIYNEYVLTTRNFI 399
            IRK  +SG+FM  A       Y T+     V +HPS+ +  K  E+V+Y+  VLT+R ++
Sbjct: 1021 IRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYM 1080

Query: 398  RTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRV-LERLHNKRERERAASR 255
              VT I  +WL+++AP +Y   +  S   K+  +  LHNK  +++ + R
Sbjct: 1081 SQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKIIPLHNKFAKDQNSWR 1129

>PRH1_SCHPO (Q03319) Probable ATP-dependent RNA helicase prh1 (EC 3.6.1.-)|
          Length = 719

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
 Frame = -1

Query: 578 NIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM-DHKPEWVIYNEYVLTTRNF 402
           N+  + LSGY    A L   G Y T+  NQ + +HPS+ +   K E ++Y+E V TT+++
Sbjct: 635 NLLLSFLSGYITNTALLHPDGSYRTIIGNQTISIHPSSSLFGKKVEAIMYHELVFTTKSY 694

Query: 401 IRTVTDIRGEWLIDIAPQY 345
           +R V+ IR  WL  +AP Y
Sbjct: 695 VRGVSSIRSNWLNAVAPHY 713

>DHX35_CAEEL (Q9BKQ8) Probable ATP-dependent RNA helicase DHX35 homolog (EC|
           3.6.1.-)
          Length = 732

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
 Frame = -1

Query: 578 NIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHK---PEWVIYNEYVLTTR 408
           NIR+ +++G+F Q A    TG Y+TVK++   +++  + +  K   P+WVI+ E +   +
Sbjct: 627 NIRQCLVTGFFSQAAQYHYTGKYMTVKESFPFNMYKGSSIMFKKDYPKWVIFTEVM---Q 683

Query: 407 NFIRTVTDIRGEWLIDIAPQYYDLTNFPSCEAKRV 303
           + IR VT I  EWL ++AP YY+         KR+
Sbjct: 684 DSIRDVTVIEPEWLYELAPHYYEFGTEGELAEKRM 718

>MOG1_CAEEL (P34498) Probable pre-mRNA-splicing factor ATP-dependent RNA helicase|
            mog-1 (EC 3.6.1.-) (Sex determination protein mog-1)
            (Masculinization of germ line protein 1)
          Length = 1131

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNC---MDHKPEWVIYNEYVLTTRN 405
            +RK + S YF   A L   G Y+ V+      LHP++    M   P++V+Y+E ++T + 
Sbjct: 979  VRKCICSAYFHNAARLKGIGEYVNVRTGIPCFLHPTSALFGMGFMPDYVVYHELIMTAKE 1038

Query: 404  FIRTVTDIRGEWLIDIAPQYYDL 336
            +++ VT +   WL ++ P +Y +
Sbjct: 1039 YMQCVTAVDAIWLAELGPMFYSI 1061

>DHX33_HUMAN (Q9H6R0) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)|
           (DEAH box protein 33)
          Length = 707

 Score = 57.8 bits (138), Expect = 2e-08
 Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
 Frame = -1

Query: 578 NIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDH-KPEWVIYNEYVLTTRNF 402
           ++R+ +    FM  A L   G Y T   +Q V +HPS+ + H KP  V+Y E + T + +
Sbjct: 619 SVRRCLAHSLFMSTAELQPDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTELLYTNKCY 678

Query: 401 IRTVTDIRGEWLIDIAPQYY 342
           +R +  I  +WL + AP+Y+
Sbjct: 679 MRDLCVIDAQWLYEAAPEYF 698

>DHX33_MOUSE (Q80VY9) Putative ATP-dependent RNA helicase DHX33 (EC 3.6.1.-)|
           (DEAH box protein 33)
          Length = 698

 Score = 57.4 bits (137), Expect = 3e-08
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
 Frame = -1

Query: 578 NIRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDH-KPEWVIYNEYVLTTRNF 402
           ++R+ M    FM  A L   G Y T   +Q V +HPS+ + H KP  V+Y   + T + +
Sbjct: 610 SVRRCMAHSLFMNTAELQTDGTYATTDTHQPVAIHPSSVLFHCKPACVVYTSLLYTNKCY 669

Query: 401 IRTVTDIRGEWLIDIAPQYY 342
           +R +  +  EWL + AP Y+
Sbjct: 670 MRDLCVVDAEWLYEAAPDYF 689

>PRP16_SCHPO (Q9P774) Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16|
            (EC 3.6.1.-)
          Length = 1173

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCM---DHKPEWVIYNEYVLTTRN 405
            +R+ + S YF Q A     G Y+ ++     HLH ++ +    + P++VIY+E VLT++ 
Sbjct: 1028 VRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHLHVTSSLYGLGYLPDYVIYHELVLTSKE 1087

Query: 404  FIRTVTDIRGEWLIDIAPQYYDL 336
            ++  VT +   WL +    YY +
Sbjct: 1088 YMNIVTSVDPYWLAEFGGVYYSV 1110

>PRP16_YEAST (P15938) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16|
            (EC 3.6.1.-)
          Length = 1071

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
 Frame = -1

Query: 575  IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMD---HKPEWVIYNEYVLTTRN 405
            I+K + SG+  Q A +    +Y+ +K    V LHP++ +      P +V+Y+E ++T++ 
Sbjct: 903  IKKCICSGFAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLPPYVVYHELLMTSKE 962

Query: 404  FIRTVTDIRGEWLIDIAPQYYDL 336
            +I  VT +   WL++     YD+
Sbjct: 963  YICCVTSVDPFWLMEYGGLLYDI 985

>PRP2_YEAST (P20095) Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2 (EC|
            3.6.1.-)
          Length = 876

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
 Frame = -1

Query: 584  YVNIR--KAMLSGYFMQVAHLXRTGHYLTVKDNQV--VHLHPSNCM--DHKPE------W 441
            Y+N R  +  +SG+ M +  L  TG+    + +    V +HP++ +  +HK +      +
Sbjct: 770  YINARITRCFISGFPMNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKY 829

Query: 440  VIYNEYVLTTRNFIRTVTDI-RGEWLIDIAPQYY 342
            V+Y + +LT++ FIR    I + EWLID+ PQ +
Sbjct: 830  VLYQQLMLTSKEFIRDCLVIPKEEWLIDMVPQIF 863

>DHR2_YEAST (P36009) Probable ATP-dependent RNA helicase DHR2 (EC 3.6.1.-)|
           (DEAH box RNA helicase DHR2) (Helicase JA2)
          Length = 735

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = -1

Query: 575 IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNC--MDHKPEWVIYNEYVLTTRNF 402
           I K  L+G+    A       Y TV   + + +HPS+   M+     ++Y EYV TT+ +
Sbjct: 645 ILKCFLTGFIKNTAIGMPDRSYRTVSTGEPISIHPSSMLFMNKSCPGIMYTEYVFTTKGY 704

Query: 401 IRTVTDIRGEWLIDI 357
            R V+ I   WL ++
Sbjct: 705 ARNVSRIELSWLQEV 719

>YK99_SCHPO (Q9HE06) Putative pre-mRNA-splicing factor ATP-dependent RNA|
           helicase C20H4.09 (EC 3.6.1.-) (DEAH-box helicase
           C20H4.09)
          Length = 647

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = -1

Query: 575 IRKAMLSGYFMQVAHLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLT-TRNFI 399
           I K +L G+   VAHL   G Y T+   QV     S   + K  W++Y+  V + T+ F+
Sbjct: 569 ILKCLLDGFVRNVAHLQNDGSYKTIGGKQVWLDSSSVLHEKKTPWIMYSSAVESETQIFV 628

Query: 398 RTVTDIRGEWL 366
           + ++ I   WL
Sbjct: 629 KNISKIESFWL 639

>DHX37_HUMAN (Q8IY37) Probable ATP-dependent RNA helicase DHX37 (EC 3.6.1.-) (DEAH|
            box protein 37)
          Length = 1157

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = -1

Query: 512  YLTVKDNQVVHLHPSNCMDHK-PEWVIYNEYVLTTRNFIRTVTDIRGEWLIDIAPQY 345
            Y T   +  V +HPS+ +  + PE+V+Y E V TT+ +++ V+ +  +W+  + P Y
Sbjct: 955  YKTPLLDDPVFIHPSSVLFKELPEFVVYQEIVETTKMYMKGVSSVEVQWIPALLPSY 1011

>KZ_DROME (O46072) Probable ATP-dependent RNA helicase kurz (EC 3.6.1.-)|
          Length = 1192

 Score = 36.6 bits (83), Expect = 0.055
 Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
 Frame = -1

Query: 479  LHPSNCMDHK-PEWVIYNE-YVL----TTRNFIRTVTDIRGEWLIDIAP 351
            LH S+ +  K PEWVIY E Y L    +T+ FIR +T I  EWL+   P
Sbjct: 991  LHVSSVLRQKAPEWVIYQEAYELQNGDSTKMFIRGITAIEPEWLLLYVP 1039

>HRPA_HAEIN (P45018) ATP-dependent RNA helicase hrpA homolog (EC 3.6.1.-)|
          Length = 1304

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
 Frame = -1

Query: 584 YVNIRKAMLSGYFMQVA-HLXRTGHYLTVKDNQVVHLHPSNCMDHKPEWVIYNEYVLTTR 408
           Y  I  A+LSG    +         YL  ++        S     +P+WV+  E V T++
Sbjct: 625 YQQIHTALLSGLLSHIGLKEAEKQQYLGARNAHFAIFPNSVLFKKQPKWVMAAELVETSK 684

Query: 407 NFIRTVTDIRGEWLIDIA 354
            + R V +I  EW+  +A
Sbjct: 685 LWGRMVAEIEPEWIEPLA 702


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,088,148
Number of Sequences: 219361
Number of extensions: 1980600
Number of successful extensions: 4394
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 4266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4372
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)