ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12)... 317 1e-86
2MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12)... 243 3e-64
3MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12)... 155 8e-38
4MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12)... 147 3e-35
5EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precur... 31 2.4
6CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candid... 30 4.0
7SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precurs... 30 5.3
8SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... 30 6.9
9NMDE3_HUMAN (Q14957) Glutamate [NMDA] receptor subunit epsilon 3... 27 8.0

>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase) (Hv-MMT1)
          Length = 1088

 Score =  317 bits (813), Expect = 1e-86
 Identities = 154/154 (100%), Positives = 154/154 (100%)
 Frame = -3

Query: 595  DTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCG 416
            DTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCG
Sbjct: 931  DTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCG 990

Query: 415  WDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPD 236
            WDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPD
Sbjct: 991  WDAVGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVPD 1050

Query: 235  YCRFSFALESGDFDRAMECIARFRELVLGGGAKV 134
            YCRFSFALESGDFDRAMECIARFRELVLGGGAKV
Sbjct: 1051 YCRFSFALESGDFDRAMECIARFRELVLGGGAKV 1084



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>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1091

 Score =  243 bits (620), Expect = 3e-64
 Identities = 116/151 (76%), Positives = 138/151 (91%), Gaps = 1/151 (0%)
 Frame = -3

Query: 595  DTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCG 416
            +TF+SF SLSRPH+TLKYTF+KLLGLKNQKDQHFSDLI+EQKE LKNRA+QLI+ LESCG
Sbjct: 936  ETFHSFSSLSRPHTTLKYTFKKLLGLKNQKDQHFSDLIVEQKEELKNRANQLIQTLESCG 995

Query: 415  WDA-VGCHGGISMLAKPTAYIGKSLKVDGFEGKLDSHNMREALLRSTGLCISSSGWTGVP 239
            W+A +GC GGISMLAKPTAY+GK+ K  GF+G+LD+ N+REA+LR+TGLCI+SS WTG+P
Sbjct: 996  WEAAIGC-GGISMLAKPTAYMGKAFKAAGFDGELDASNIREAILRATGLCINSSSWTGIP 1054

Query: 238  DYCRFSFALESGDFDRAMECIARFRELVLGG 146
             YCRFSFALE G+F+RAM CIARF+ELVLGG
Sbjct: 1055 GYCRFSFALERGEFERAMGCIARFKELVLGG 1085



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>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1088

 Score =  155 bits (392), Expect = 8e-38
 Identities = 74/147 (50%), Positives = 108/147 (73%), Gaps = 4/147 (2%)
 Frame = -3

Query: 583  SFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCGWDAV 404
            SF  L++PH+T++YT +KLL L  QK  + +     Q++ L  R  +L + LE+CGW+ +
Sbjct: 942  SFSGLNKPHNTVRYTAKKLLELGEQKG-NLTGAAQGQEKLLATRLKRLKETLENCGWEVI 1000

Query: 403  GCHGGISMLAKPTAYIGKSLKV--DG--FEGKLDSHNMREALLRSTGLCISSSGWTGVPD 236
               GG+S++AKP+AY+GK++K+  DG  +  KLD  N+REA+LR+TGLCI+   WTG+PD
Sbjct: 1001 EARGGVSVIAKPSAYLGKNIKLEKDGSTWVTKLDGTNIREAMLRATGLCINGPSWTGIPD 1060

Query: 235  YCRFSFALESGDFDRAMECIARFRELV 155
            YCRF+FALE GDFDRA++CI +F +LV
Sbjct: 1061 YCRFTFALEDGDFDRALDCIVKFNQLV 1087



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>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met|
            S-methyltransferase)
          Length = 1071

 Score =  147 bits (370), Expect = 3e-35
 Identities = 67/151 (44%), Positives = 103/151 (68%), Gaps = 4/151 (2%)
 Frame = -3

Query: 595  DTFYSFPSLSRPHSTLKYTFRKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCG 416
            D F++ P LS+PHST+KY  +K+L LK +K   F D + E  +TL+ R+ +L ++L++ G
Sbjct: 919  DAFHTLPGLSKPHSTVKYAAKKMLALKEEKASDFLDAVSETIKTLEGRSRRLKEVLQNSG 978

Query: 415  WDAVGCHGGISMLAKPTAYIGKSLKVDGFEG----KLDSHNMREALLRSTGLCISSSGWT 248
            W+ +    GISM+AKP AY+ K +K+   +G    +L   NMR+  L  TG+C++S  WT
Sbjct: 979  WEVIQPSAGISMVAKPKAYLNKKVKLKAGDGQEIVELTDSNMRDVFLSHTGVCLNSGSWT 1038

Query: 247  GVPDYCRFSFALESGDFDRAMECIARFRELV 155
            G+P YCRFSFALE  +FD+A+E IA+F+ ++
Sbjct: 1039 GIPGYCRFSFALEDSEFDKAIESIAQFKSVL 1069



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>EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precursor (Multiple|
           EGF-like domain protein 7) (Multiple epidermal growth
           factor-like domain protein 7) (Vascular endothelial
           statin) (VE-statin) (NOTCH4-like protein) (ZNEU1)
          Length = 273

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/64 (37%), Positives = 29/64 (45%)
 Frame = +1

Query: 202 RRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLPSCCGCPACPQSRPP*AICQCRRSVLQA 381
           RRSP     G +PA     CC    R  + GLP  CG   C   +PP   C+   S +Q 
Sbjct: 74  RRSP-----GLAPARPRYACCPGWKR--TSGLPGACGAAIC---QPP---CRNGGSCVQP 120

Query: 382 SRCR 393
            RCR
Sbjct: 121 GRCR 124



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>CASC5_HUMAN (Q8NG31) Protein CASC5 (Cancer susceptibility candidate gene 5|
            protein) (ALL1-fused gene from chromosome 15q14)
            (AF15q14) (D40/AF15q14 protein)
          Length = 2342

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 535  RKLLGLKNQKDQHFSDLILEQKETLKNRADQLIKMLESCGWDAV 404
            R LL L+ QK+Q  + +   QK+  +NR ++L+  L    WD V
Sbjct: 2097 RNLLELEVQKEQTLAQIDFMQKQ--RNRTEELLDQLSLSEWDVV 2138



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>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 6/98 (6%)
 Frame = +1

Query: 124 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLP 300
           C H   H   G      RC P W G    S     S +S     T  C C   W      
Sbjct: 150 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHVGWWGRSCN 204

Query: 301 SCCGCPACPQSRPP*AICQCRRSVLQA-----SRCRHG 399
           + C C + P  +     CQCR  +  A      +C HG
Sbjct: 205 NQCACNSSPCEQQS-GRCQCRERMFGARCDRYCQCSHG 241



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>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 27/90 (30%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
 Frame = +1

Query: 124 CYHSP*HRHQGPAP*TGRCTP-WPGRSRRSPEQS*SGSSPAPLSTRCC*CTARWTSGGLP 300
           C H   H   G      RC P W G    S     S +S     T  C C A W      
Sbjct: 158 CQHGTCHPRSGAC----RCEPGWWGAQCASACYC-SATSRCDPQTGACLCHAGWWGRSCN 212

Query: 301 SCCGCPACPQSRPP*AICQCRRSVLQASRC 390
           + C C + P  +     CQCR     A RC
Sbjct: 213 NQCACNSSPCEQQS-GRCQCRERTFGA-RC 240



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>NMDE3_HUMAN (Q14957) Glutamate [NMDA] receptor subunit epsilon 3 precursor|
           (N-methyl D-aspartate receptor subtype 2C) (NR2C)
           (NMDAR2C)
          Length = 1233

 Score = 26.9 bits (58), Expect(2) = 8.0
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +1

Query: 151 QGPAP*TGRCTPWPGRSRRSPEQS*SGSSPAPLSTRCC 264
           + P P TG C P     RR    + S    AP +  CC
Sbjct: 417 ESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCC 454



 Score = 20.8 bits (42), Expect(2) = 8.0
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 113 QPLVATIHLSTATKDQLP 166
           QP+V + HL+ AT ++ P
Sbjct: 395 QPVVDSRHLTVATLEERP 412


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,129,306
Number of Sequences: 219361
Number of extensions: 1541239
Number of successful extensions: 4805
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4795
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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