ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18o02 |
|---|---|
| Clone Library Name | barley_pub |
>VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| Length = 182 Score = 251 bits (640), Expect = 2e-66 Identities = 112/174 (64%), Positives = 144/174 (82%) Frame = -3 Query: 682 LHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDAR 503 LHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK+L D+HI RG++DE+ Sbjct: 9 LHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLN 68 Query: 502 YPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGV 323 YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++GHTH+F+A++HE Sbjct: 69 YPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKF 128 Query: 322 VINPGSATGAHSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKT 161 INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++KK+ Sbjct: 129 YINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKKS 182
>VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| (hVPS29) (PEP11) Length = 182 Score = 250 bits (639), Expect = 2e-66 Identities = 112/173 (64%), Positives = 143/173 (82%) Frame = -3 Query: 682 LHIPHRAPDLPAKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDAR 503 LHIPHR LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK+L D+HI RG++DE+ Sbjct: 9 LHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLN 68 Query: 502 YPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGV 323 YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+LQRQ DVDIL++GHTH+F+A++HE Sbjct: 69 YPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKF 128 Query: 322 VINPGSATGAHSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 164 INPGSATGA++++ ++ PSFVLMDI VV YVY+LI +VKV++I++KK Sbjct: 129 YINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIEYKK 181
>PEP11_YEAST (P38759) Protein PEP11| Length = 282 Score = 98.6 bits (244), Expect = 2e-20 Identities = 67/165 (40%), Positives = 86/165 (52%), Gaps = 25/165 (15%) Frame = -3 Query: 679 HIPHRAPDLPAKFKSML-VPGKIQHIICTGNLCIKEVHDYLK---SLCPDLHITRGEYDE 512 HIP RA DLP KFK +L VP KI + GN + +D+LK + ++ I RGE+D Sbjct: 10 HIPDRATDLPVKFKKLLSVPDKISQVALLGNST--KSYDFLKFVNQISNNITIVRGEFD- 66 Query: 511 DARYPETKT------------------VTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLD 386 + P TK + G K+G C G+ VVP D SL L RQLD Sbjct: 67 NGHLPSTKKDKASDNSRPMEEIPMNSIIRQGALKIGCCSGYTVVPKNDPLSLLALARQLD 126 Query: 385 VDILVTGHTHQFKAYKHEGGVVINPGSATGAHSS---ITYDVNPS 260 VDIL+ G TH +AY EG +NPGS TGA ++ I +DV S Sbjct: 127 VDILLWGGTHNVEAYTLEGKFFVNPGSCTGAFNTDWPIVFDVEDS 171 Score = 42.4 bits (98), Expect = 0.001 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = -3 Query: 289 SSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKK 164 S I +PSF L+DI G +Y+Y ++GEVKVDK+ ++K Sbjct: 240 SDINGSNSPSFCLLDIQGNTCTLYIYLYVNGEVKVDKVVYEK 281
>Y1774_METTH (O27802) Putative metallophosphoesterase MTH1774 (EC 3.1.4.-)| Length = 172 Score = 67.8 bits (164), Expect = 3e-11 Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 3/151 (1%) Frame = -3 Query: 679 HIPHRAPDLP-AKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDED-- 509 HIP RA ++P A F + ++ I+ G+L ++ L++L P + +G D Sbjct: 10 HIPDRASEIPEAVFDAFR---DVELILHAGDLTSPDILTELETLAP-VECVQGNMDRHYG 65 Query: 508 ARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEG 329 P ++ I F++GL HG +V P GD L L +L D+L++GHTHQ + E Sbjct: 66 IETPRSRLFEIESFRVGLIHG-EVYPRGDTQQLRYLGLELGADVLISGHTHQPFIRELED 124 Query: 328 GVVINPGSATGAHSSITYDVNPSFVLMDIDG 236 V++NPGS T + +PS +++ IDG Sbjct: 125 MVLLNPGSPT-----VPRLTDPSVMVLRIDG 150
>Y623_METJA (Q58040) Putative metallophosphoesterase MJ0623 (EC 3.1.4.-)| Length = 192 Score = 58.5 bits (140), Expect = 2e-08 Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%) Frame = -3 Query: 679 HIPHRAPDLP-AKFKSMLVPGKIQHIICTGNLCIKEVHDYLKSLCPDLHITRGEYDEDAR 503 H+ RA +LP A F + II G++ KE+ D LK L + + +G D Sbjct: 43 HLYDRAFELPKAVFDEF---SNVDLIIHCGDVTDKEILDSLKDLAKVVAV-KGNMDY-LN 97 Query: 502 YPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGV 323 P + + I K+G+ HG V P GD L +L +++ VD+L++GHTH + Sbjct: 98 LPRKEILEINDIKIGVIHGDVVYPRGDRLKLRLLGKEMGVDVLISGHTHTPFIDDCRDIL 157 Query: 322 VINPGSAT 299 ++NPGS T Sbjct: 158 LLNPGSPT 165
>Y207_MYCGE (P47449) Putative metallophosphoesterase MG207 (EC 3.1.4.-)| Length = 163 Score = 34.7 bits (78), Expect = 0.28 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 11/88 (12%) Frame = -3 Query: 496 ETKTVTIGQFKLGLCHGHQ-----VVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHE 332 E + +GQ L HGHQ + W L L + +Q D+L+ GH+H K Sbjct: 60 EIEIFQLGQINFVLMHGHQAPRDNLKKWYQL--LVLKAQQYPCDVLIFGHSHIEYTNKIN 117 Query: 331 GGVVINPGS------ATGAHSSITYDVN 266 +INPGS T S T+ VN Sbjct: 118 MIQLINPGSLQLPRNQTNTPSYCTFIVN 145
>YSNB_BACSU (P94559) Putative metallophosphoesterase ysnB (EC 3.1.4.-)| Length = 171 Score = 33.9 bits (76), Expect = 0.47 Identities = 20/77 (25%), Positives = 36/77 (46%) Frame = -3 Query: 535 ITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTH 356 + +G D + + +T G K+ + HGH L ++ +L D++ GH+H Sbjct: 52 VVKGNCDFAGDFKDELLLTAGSRKILVTHGHLHGIKQTLLNVYYRAEELGADVICFGHSH 111 Query: 355 QFKAYKHEGGVVINPGS 305 + G ++INPGS Sbjct: 112 IAGSEVLRGKLMINPGS 128
>YFCE_ECOLI (P67095) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.1 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -3 Query: 577 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 422 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 421 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 245 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 244 IDGLRVVVYVYELIDGEVKVD 182 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECOL6 (P67096) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.1 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -3 Query: 577 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 422 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 421 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 245 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 244 IDGLRVVVYVYELIDGEVKVD 182 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>YFCE_ECO57 (P67097) Phosphodiesterase yfcE (EC 3.1.4.-)| Length = 184 Score = 32.7 bits (73), Expect = 1.1 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 9/141 (6%) Frame = -3 Query: 577 EVHDYLKSLCPDLHITRGEYDEDA-----RYPET---KTVTIGQFKLGLCHGHQVVPWGD 422 +V + L + + RG D + +P T + V + + +L L HGH P Sbjct: 55 KVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFLTHGHLFGP--- 111 Query: 421 LDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGSATGAHSSITYDVNP-SFVLMD 245 ++L L + D+LV GHTH A + NPGS SI NP S+ ++D Sbjct: 112 -ENLPALNQN---DVLVYGHTHLPVAEQRGEIFHFNPGSV-----SIPKGGNPASYGMLD 162 Query: 244 IDGLRVVVYVYELIDGEVKVD 182 D L V+ + I +V ++ Sbjct: 163 NDVLSVIALNDQSIIAQVAIN 183
>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2| precursor Length = 503 Score = 31.6 bits (70), Expect = 2.4 Identities = 20/51 (39%), Positives = 25/51 (49%) Frame = -1 Query: 381 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMASV 229 TSSSP T SS S+ +SST A + T+ S TST S S+ Sbjct: 208 TSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSI 258
>PCP_MYCTU (P0A5R4) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 485 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 321 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 320 HQPWLSHGRPQQHHI 276 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PCP_MYCBO (P0A5R5) Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)| (5-oxoprolyl-peptidase) (Pyroglutamyl-peptidase I) (PGP-I) (Pyrase) Length = 222 Score = 31.6 bits (70), Expect = 2.4 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Frame = -2 Query: 485 SYYWPVQARAMPWPSGCSMGRPGLPSDASAAAG---CGHPRHRA--HPSVQGLQARGGCR 321 +Y+ V RAM +M + G+P+D S AAG C H + H + +GL R G Sbjct: 114 AYHATVPVRAMV----LAMRKAGVPADVSDAAGTFVCNHLMYGVLHHLAQKGLPVRAGWI 169 Query: 320 HQPWLSHGRPQQHHI 276 H P L H++ Sbjct: 170 HLPCLPSVAALDHNL 184
>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -2 Query: 443 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 264 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 263 ELRAHGH*WPP 231 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -2 Query: 443 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 264 SG S RP AG GH H G GG R HG P H P Sbjct: 809 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 866 Query: 263 ELRAHGH*WPP 231 R H H PP Sbjct: 867 GHRGHDHRGPP 877
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 31.2 bits (69), Expect = 3.1 Identities = 24/71 (33%), Positives = 24/71 (33%) Frame = -2 Query: 443 SGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQP 264 SG S RP AG GH H G GG R HG P H P Sbjct: 808 SGGSGHRPHEGPGGGMGAGGGHRPHEGPGGSMG--GSGGHRPHEGPGHGGPHGHRPHDVP 865 Query: 263 ELRAHGH*WPP 231 R H H PP Sbjct: 866 GHRGHDHRGPP 876
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%) Frame = -2 Query: 452 PWPSGCS--MGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 327 P P G S G PGLP + G GHP P +G + G Sbjct: 1130 PGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPGQDG 1173
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 31.2 bits (69), Expect = 3.1 Identities = 19/54 (35%), Positives = 21/54 (38%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 312 P AR P G S G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQG-SRGEPGPPGPAGAAGPAGNPGADGQPGAKGATGAPGIAGAP 398
>NTDO_CAEEL (Q03614) Sodium-dependent dopamine transporter (DA transporter)| (DAT) Length = 615 Score = 31.2 bits (69), Expect = 3.1 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 95 CAPTFQSSFVLFPVLVVPSCSIGKP 21 CA +F S FV+F VL SC GKP Sbjct: 347 CATSFLSGFVIFSVLGYMSCKSGKP 371
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 31.2 bits (69), Expect = 3.1 Identities = 20/50 (40%), Positives = 29/50 (58%) Frame = -1 Query: 381 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSWTLMAS 232 ++SS T SS TST SSST P + + +S +TST +S + T +S Sbjct: 204 STSSSSTSTSSSSTSTS--SSSTSTSPSSTSTSSSLTSTSSSSTSTSQSS 251
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 31.2 bits (69), Expect = 3.1 Identities = 23/71 (32%), Positives = 25/71 (35%), Gaps = 1/71 (1%) Frame = -2 Query: 440 GCSMGRPGLPSDASAAAGCGHPRHRAHPSVQG-LQARGGCRHQPWLSHGRPQQHHI*RQP 264 G MG P + G HR H G + A GG R HG P H P Sbjct: 791 GGGMGGGHRPHEGPGGGMGGGSGHRPHEGPGGGMGAGGGHRPHEGPGHGGPHGHRPHDVP 850 Query: 263 ELRAHGH*WPP 231 R H H PP Sbjct: 851 GHRGHDHRGPP 861
>P936_METJA (Q58346) Phosphodiesterase MJ0936 (EC 3.1.4.-)| Length = 166 Score = 30.8 bits (68), Expect = 4.0 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 487 TVTIGQFKLGLCHGHQVVPWGDLDSLAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPG 308 +V I K + HGH L M + D+++ GHTH+ + + +VINPG Sbjct: 85 SVEIDDLKFFITHGHHQ------SVLEMAIKSGLYDVVIYGHTHERVFEEVDDVLVINPG 138 Query: 307 SATG 296 G Sbjct: 139 ECCG 142
>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein| pam/highwire/rpm-1) Length = 5233 Score = 30.8 bits (68), Expect = 4.0 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = -2 Query: 422 PGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQPWLSHGRPQQHHI*RQPELRAHGH 243 PG + AS G HR++ QG + H P H QQHH +Q L+ H Sbjct: 3874 PGTTAAASVGGGNLSKFHRSYSMGQGWASLAQHNHPP--PHHPQQQHHQQQQMNLQLQQH 3931 Query: 242 *WPP 231 PP Sbjct: 3932 QAPP 3935
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 30.4 bits (67), Expect = 5.2 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = -2 Query: 413 PSDASAAAGCGHPRHRAHPSVQGLQARGG-CRHQPWLSHGR 294 PS + + HP H AHPS L + GG H W HGR Sbjct: 55 PSHGAHPSHGAHPSHGAHPSHGALPSHGGQVPHSGW-GHGR 94
>AKR1_USTMA (Q4P6L3) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin| repeat-containing protein AKR1) Length = 844 Score = 30.4 bits (67), Expect = 5.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -1 Query: 375 SSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRASCSW 247 ++PGTP+SS ++T+ +S ST+ P P +S SW Sbjct: 2 AAPGTPLSS--SATQAISVSTVDAPSDPLLSSQSAQLDGHSSW 42
>TF2B_PYRAE (Q8ZWS3) Transcription initiation factor IIB (TFIIB)| Length = 333 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/56 (25%), Positives = 33/56 (58%) Frame = +2 Query: 512 LIIFTSGNVEIRTKAFKVVVNFLDAEVPGADDVLDLARDEHGLELGGQVGRTVRDV 679 L+ +T + + +++++ L+ +VP +D +L ++R L+L G+V +T D+ Sbjct: 210 LVRYTKASRREVARCYRLLLRELNVKVPISDPILYISRIAEQLKLSGEVVKTAIDI 265
>RECF_SYNPX (Q7U4L8) DNA replication and repair protein recF| Length = 365 Score = 30.4 bits (67), Expect = 5.2 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +2 Query: 92 RKNKNKQDRISVMWKAPSAMHRGGLLEVDLVNLHL 196 R ++ QDR + W+AP A+ R GL + D + L L Sbjct: 43 RSHRCSQDRDLIQWEAPRALLRAGLDDGDQLELEL 77
>CHEB2_PSE14 (Q48GG6) Chemotaxis response regulator protein-glutamate| methylesterase 2 (EC 3.1.1.61) Length = 387 Score = 30.4 bits (67), Expect = 5.2 Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%) Frame = -2 Query: 683 SAHPAPCARPARQVQVH-ARPGQDPAHHLHREPLH 582 S PAP PAR V A P PA H H P H Sbjct: 157 SRAPAPTTAPARAVPTRTAAPATAPAAHAHHAPAH 191
>MDFI_MOUSE (P70331) MyoD family inhibitor (Myogenic repressor I-mf)| Length = 251 Score = 30.4 bits (67), Expect = 5.2 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 9/86 (10%) Frame = -2 Query: 446 PSGCS---MGRPGLPSDASAAAGCGHPRHR---AHPSV---QGLQARGGCRHQPWLSHGR 294 P+G S + PG A A G HR HPS+ G ++RG R + Sbjct: 100 PNGSSHDHLSEPGSAGHAGNGALGGSKAHRKLQTHPSLGSQAGRKSRGSARSASQV---- 155 Query: 293 PQQHHI*RQPELRAHGH*WPPCCCLR 216 P Q + P +R H P CCLR Sbjct: 156 PLQAQEGKAPAVRIHRQTASPTCCLR 181
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 6.9 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%) Frame = -1 Query: 471 SSS*GYAMAIRLFHGATWTP*RCF---SGSWMWTSSSPGTPISSR--PTSTRGVSSSTLA 307 SSS G A+ ++ T TP SGS + SS PGT ++R T+T V++ ++A Sbjct: 4547 SSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSMA 4606 Query: 306 QPRAPTAASHMTSTRASCSWTLMAS 232 P + T S + + + T+ A+ Sbjct: 4607 TPSSSTQTSGTPPSLTTTATTITAT 4631
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 30.0 bits (66), Expect = 6.9 Identities = 12/34 (35%), Positives = 16/34 (47%) Frame = -2 Query: 428 GRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGG 327 G+PG+P G G P P + GL+ GG Sbjct: 1346 GQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGG 1379
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 381 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 250 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105
>SYV_TREPA (O83998) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 956 Score = 30.0 bits (66), Expect = 6.9 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 91 PPPSRALLFCFPY*LYPPAR*ENQSCVYI 5 P + ALL C PY +Y P+R + ++C +I Sbjct: 751 PSGAHALLMCAPYPVYVPSRVDARACAHI 779
>HXD13_CARPS (Q5EU41) Homeobox protein Hox-D13| Length = 333 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 309 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 174 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 233 Query: 308 LSHGRPQQHH 279 + +PQ H Sbjct: 234 CAKDQPQGSH 243
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.0 bits (66), Expect = 6.9 Identities = 23/46 (50%), Positives = 26/46 (56%), Gaps = 2/46 (4%) Frame = -1 Query: 381 TSSSPGTPI-SSRPTSTRGVSSSTLA-QPRAPTAASHMTSTRASCS 250 TSSSP T +S P+ST SSST A AP+ AS TS S S Sbjct: 60 TSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTSTS 105
>HXD13_HUMAN (P35453) Homeobox protein Hox-D13 (Hox-4I)| Length = 335 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 309 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 176 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 235 Query: 308 LSHGRPQQHH 279 + +PQ H Sbjct: 236 CTKDQPQGSH 245
>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)| Length = 339 Score = 30.0 bits (66), Expect = 6.9 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPS--DASAAAGCGHPRHRAHPSVQGLQA---RGGCRHQPW 309 P +A+ + + G + +P D + G G PRH A+ S++G Q+ G Q + Sbjct: 180 PARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 239 Query: 308 LSHGRPQQHH 279 + +PQ H Sbjct: 240 CAKDQPQGSH 249
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 9.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 312 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 9.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 312 P AR P G G PG P A AA G+P P +G G P Sbjct: 346 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 398
>Y126_MYCPN (P75349) Putative metallophosphoesterase MG207 homolog (EC 3.1.4.-)| (C09_orf159) Length = 159 Score = 29.6 bits (65), Expect = 9.0 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -3 Query: 457 LCHGHQVVPWGDLDS----LAMLQRQLDVDILVTGHTHQFKAYKHEGGVVINPGS 305 L HGHQ P DL L + D+L+ GH+H +G VINPGS Sbjct: 73 LMHGHQA-PRHDLKQWYKMLVDQAKSYLCDVLIVGHSHIEHYETIDGIQVINPGS 126
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 9.0 Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -1 Query: 441 RLFHGATWTP*RCFSGSWMWTSSSPGTPISSRPTSTR---GVSSSTLAQPRAPTAA 283 RL G + P S S +SS+P P PTST+ SS++LA+P+AP AA Sbjct: 477 RLPSGPSLPPSSSSSSSSSSSSSAPQRP--GGPTSTQVNASSSSNSLAEPQAPQAA 530
>YS89_CAEEL (Q09624) Hypothetical protein ZK945.9| Length = 3178 Score = 29.6 bits (65), Expect = 9.0 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = -1 Query: 381 TSSSPGTPISSRPTSTRGVSSSTLAQPRAPTAASHMTSTRAS 256 TSS+P TP S+ TST SST + T+A T+ + S Sbjct: 673 TSSTPSTPSSTLSTSTVTEPSSTRSSDSTTTSAGSTTTLQES 714
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 9.0 Identities = 18/54 (33%), Positives = 20/54 (37%) Frame = -2 Query: 473 PVQARAMPWPSGCSMGRPGLPSDASAAAGCGHPRHRAHPSVQGLQARGGCRHQP 312 P AR P G G PG P A AA G+P P +G G P Sbjct: 353 PQGARGSEGPQGVR-GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAP 405
>ILA1_CAEEL (Q21507) Probable insulin-like peptide alpha-type 1 precursor| Length = 89 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 2/46 (4%) Frame = -3 Query: 589 LCIKEVHDYLKSLCPDLHITRGEYDE-DARYPETKTVTIGQF-KLG 458 LC + +++ +CPD+ +T G+ ++ YP K V + +F K+G Sbjct: 31 LCATKAVKHIRKVCPDMCLTGGKIEKFPVFYPNFKEVEVNEFCKMG 76 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,033,487 Number of Sequences: 219361 Number of extensions: 2253964 Number of successful extensions: 8446 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 7361 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8374 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6769072002 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
