| Clone Name | rbags18n21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M60598.1|WHTDHDPD17 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds, clone pDA17 Length = 1458 Score = 791 bits (399), Expect = 0.0 Identities = 560/611 (91%), Gaps = 2/611 (0%) Strand = Plus / Minus Query: 24 ctattctcatttcttactggaacaggcatcacaaggtgcgaagaaaccaaacgggttcaa 83 |||||||||| |||||||||||| || |||||||||||| |||||||||||||||||| | Sbjct: 1450 ctattctcatatcttactggaactggtatcacaaggtgccaagaaaccaaacgggttcca 1391 Query: 84 aattaacatgcagtcagagaaaa-gatcgacaaatgactggtgaacgaatgaagcatcta 142 ||||||||||||||||||||||| |||| ||||||||||||||||| || ||||| |||| Sbjct: 1390 aattaacatgcagtcagagaaaaagatcaacaaatgactggtgaacaaacgaagcgtcta 1331 Query: 143 aaacgatccacaaatgacactgcgactccaccgctgttcgtcagcatacactgggcacaa 202 || |||||| |||| |||||| ||| | ||||||||||||||||||||||||| ||||| Sbjct: 1330 aa-cgatccgcaaacaacactgtgacactaccgctgttcgtcagcatacactggacacaa 1272 Query: 203 agaactcacacacttattcaatacctgctgatcaacacgaaatcatcatcatccagaacc 262 ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1271 agaactcacacacatattcaatacctgctgatcaacacgaaatcatcgtcatccagaacc 1212 Query: 263 tgggcctccttctgtcccacaaaattctcccgtccaatggcttcgacaatccggacaaat 322 ||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct: 1211 cgggactccttctgtcccacaaagttctcacgtccaatggcttcgacaatccggacaaac 1152 Query: 323 tccaccctcttttcaagaggaaggggggtgtatggcaacctgaaaacaggcctcaccacg 382 ||||||||||| |||||||||||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 1151 tccaccctcttctcaagaggaaggggagtgtacggcaacctgaaaacaggtctcaccacg 1092 Query: 383 ccaagctgggccagggcagtgttgagacctatcgggttaggctcacagaacagccatttc 442 || ||||| |||||||| ||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1091 ccgagctgagccagggcggtgttgagaccgatcgggttaggctcgcagaacagccatttc 1032 Query: 443 atcagaggcagcagcttctcatttagtgtcgcgttgtccccttcaaacatgaggctgtgc 502 ||||||||||| |||||||||||||| | ||| || |||||||||||||||||||| ||| Sbjct: 1031 atcagaggcagtagcttctcatttagcgccgcattctccccttcaaacatgaggctatgc 972 Query: 503 atgagaccagggacaaggttgctagctacagaaatgactccagtggcgccgtatttccac 562 |||||||| || ||||||||||| || ||||||||||||||||| ||||| || |||||| Sbjct: 971 atgagaccgggaacaaggttgctcgccacagaaatgactccagtagcgccatacttccac 912 Query: 563 cttgagtcgtggcattcgtcatcgttgccgctccatattgttatgcctttgtcggtgtag 622 |||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 911 cttgagtcatgacattcatcatcgttgccgctccatattgatatgcctttgtcggtgtag 852 Query: 623 cacttaacccg 633 ||||||||||| Sbjct: 851 cacttaacccg 841
>gb|M60599.1|WHTDHDPD26 T.aestivum dihydrodipicolinate synthase (DHDPS) mRNA, complete cds, clones pDA08-26 Length = 1361 Score = 387 bits (195), Expect = e-104 Identities = 360/415 (86%) Strand = Plus / Minus Query: 213 cacttattcaatacctgctgatcaacacgaaatcatcatcatccagaacctgggcctcct 272 |||||||| ||||||| ||||||||||| ||||||||||||||||||||| | |||| | Sbjct: 1192 cacttatttaatacctactgatcaacacaaaatcatcatcatccagaacccgcacctctt 1133 Query: 273 tctgtcccacaaaattctcccgtccaatggcttcgacaatccggacaaattccaccctct 332 ||||||||||||| |||||||| || || ||||| |||||||||||||| || ||||| Sbjct: 1132 tctgtcccacaaagttctcccgcccgattgcttcaacaatccggacaaactcggtcctct 1073 Query: 333 tttcaagaggaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctggg 392 ||||||||| || |||| || || |||||||||||||||||| || || ||||| | Sbjct: 1072 tttcaagagagagaggggcatacggtctcctgaaaacaggcctcactacaccgagctgag 1013 Query: 393 ccagggcagtgttgagacctatcgggttaggctcacagaacagccatttcatcagaggca 452 ||||||||||||||||||| ||||| ||||||||| | || | ||||||||||||||||| Sbjct: 1012 ccagggcagtgttgagaccaatcggattaggctcagaaaataaccatttcatcagaggca 953 Query: 453 gcagcttctcatttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccag 512 | |||||||||||||| | ||| || ||||||||||||||||| ||| |||||||||||| Sbjct: 952 gtagcttctcatttagggccgcattctccccttcaaacatgagactgcgcatgagaccag 893 Query: 513 ggacaaggttgctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgt 572 | ||||||||||||| ||||||||||||||||| || || || ||||||||||| || | Sbjct: 892 gaacaaggttgctagtcacagaaatgactccagtagcaccatacttccaccttgaatcat 833 Query: 573 ggcattcgtcatcgttgccgctccatattgttatgcctttgtcggtgtagcactt 627 ||||||||||||| ||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 832 ggcattcgtcatcattgccactccatattgttatacctttgtctgtgtagcactt 778
>gb|AF290468.1|AF290468 Lolium perenne clone Lp15 unknown sequence Length = 729 Score = 323 bits (163), Expect = 4e-85 Identities = 307/353 (86%), Gaps = 2/353 (0%) Strand = Plus / Plus Query: 215 cttattcaatacctgctga-tcaacacgaaatcatcatcatccagaa-cctgggcctcct 272 |||||||||||||| || | ||||||| ||||| ||||||||||||| || | ||||| | Sbjct: 377 cttattcaatacctactaawtcaacacaaaatcgtcatcatccagaaacccgtgcctctt 436 Query: 273 tctgtcccacaaaattctcccgtccaatggcttcgacaatccggacaaattccaccctct 332 ||||||||||||| |||||||||||||| |||||||||||||||||||| || | |||| Sbjct: 437 tctgtcccacaaagttctcccgtccaattgcttcgacaatccggacaaactcgatcctcc 496 Query: 333 tttcaagaggaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctggg 392 ||||||||| ||| || | ||||| |||||||||||||||||||| || || ||||| | Sbjct: 497 tttcaagagaaagaggagcatatggtaacctgaaaacaggcctcactacaccgagctgag 556 Query: 393 ccagggcagtgttgagacctatcgggttaggctcacagaacagccatttcatcagaggca 452 ||||||||||||||||||| ||||| |||||||| ||||||| ||||||||| ||||||| Sbjct: 557 ccagggcagtgttgagaccaatcggattaggctcgcagaacaaccatttcattagaggca 616 Query: 453 gcagcttctcatttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccag 512 | |||||||| ||||| | ||| || |||||||||||||| || |||||||||||||||| Sbjct: 617 gtagcttctcgtttagcgccgcattctccccttcaaacatcagactgtgcatgagaccag 676 Query: 513 ggacaaggttgctagctacagaaatgactccagtggcgccgtatttccacctt 565 | |||||||||||||| ||||| || |||||||| || || || ||||||||| Sbjct: 677 gaacaaggttgctagccacagarataactccagtagcaccatacttccacctt 729 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 50 catcacaaggtgcgaagaaaccaaacgggttcaaaattaacatgcagtcagagaaaagat 109 ||||| ||||||| ||||||||||| |||||| |||||||| | || ||| | | ||||| Sbjct: 209 catcataaggtgcaaagaaaccaaatgggttccaaattaacttccaatcacacacaagat 268 Query: 110 cgacaaatgactggtgaacgaatgaag 136 | ||| ||||||||||||| ||||||| Sbjct: 269 caacacatgactggtgaacaaatgaag 295
>gb|DQ447323.1| Zizania latifolia dihydrodipicolinate synthase (DHDPS) mRNA, complete cds Length = 1177 Score = 295 bits (149), Expect = 9e-77 Identities = 344/409 (84%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| |||| |||||| ||||| |||||||| |||||| | ||||| ||||| |||||| Sbjct: 950 tacctactgaccaacacaaaatcgtcatcatcaagaacccgtgcctctttctgacccaca 891 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 || || |||||||| || | ||| ||||| |||||||| || |||||||||||| ||||| Sbjct: 890 aagttttcccgtccgatagattcaacaattcggacaaactcaaccctcttttcacgagga 831 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 ||||| || || | ||||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 830 aggggtacatacggtagcctgaaaacaggccttaccactccaagctgagccagggcagtg 771 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | ||||| || |||| || |||||||||||||||| ||||| ||||||||| Sbjct: 770 ttgagagcaatcggatttggctggcaaaacagccatttcatcaatggcaggagcttctca 711 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 ||||| || | | | ||||| ||||||| |||||||||||||||| ||||||||| Sbjct: 710 tttagcactgcagtctgctcttcatacatgagattgtgcatgagaccaggaacaaggttg 651 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 |||||||||||||| ||||||||||| || | ||||||||| || || |||||||| ||| Sbjct: 650 ctagctacagaaataactccagtggcaccatgtttccacctagaatcatggcattcatca 591 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 || || ||||||||||| ||||| |||||||| |||||||||||||||| Sbjct: 590 tcattaccgctccatatggttatacctttgtcagtgtagcacttaaccc 542
>gb|U61730.2|CLU61730 Coix lacryma-jobi dihydrodipicolinate synthase (dapA) gene, complete cds Length = 4214 Score = 285 bits (144), Expect = 9e-74 Identities = 330/392 (84%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| ||||||||||||||||| |||||||| ||||| ||| ||| |||||||||||| Sbjct: 4030 tacctactgatcaacacgaaatcgtcatcatcgagaactcgggtctctttctgtcccaca 3971 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 ||||||||||||||||| || || ||||||||||| || || ||||||||||||||||| Sbjct: 3970 aaattctcccgtccaatagcctcaacaatccggacgaactcggccctcttttcaagagga 3911 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||||||| ||||| |||||||| ||||||| ||||| ||||| |||||| Sbjct: 3910 agtggaacatatggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 3851 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | ||||| || || | ||||||| |||||||||||| |||||||||||||| Sbjct: 3850 ttgagagcaatcggatttggttggcagaacaaccatttcatcaggggcagcagcttctct 3791 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 || || |||||| || |||| ||||||||||||||||||| ||||| ||||||||| Sbjct: 3790 ttcagcaccgcgttctcgcctttgtacatgaggctgtgcatgagcccaggaacaaggttg 3731 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 |||| |||||||| |||||||| || || ||||||||||| || || ||||||||||| Sbjct: 3730 ctagtaacagaaattactccagtagcaccatatttccacctagaatcatggcattcgtcg 3671 Query: 584 tcgttgccgctccatattgttatgcctttgtc 615 || || |||||||| |||||||| |||||||| Sbjct: 3670 tcattaccgctccaaattgttatacctttgtc 3639
>ref|XM_471331.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| |||| |||||| |||||||| || || |||||| | ||||| |||| |||||| Sbjct: 1058 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 999 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 || || ||||||||||| | ||| || || |||||||| || |||||||||||||||||| Sbjct: 998 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 939 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||||| || |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 938 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 879 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | || || || |||| || |||| |||||||||||| || | ||||||||| Sbjct: 878 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 819 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 ||||| ||| || ||||||||| ||||||| ||||||||||||||| | ||||||| Sbjct: 818 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 759 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 ||||| |||||||| ||||||||||| || ||||||||||| || || |||||||| ||| Sbjct: 758 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 699 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 || || || |||||||| ||||| |||||||| |||||||||||||||| Sbjct: 698 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccc 650
>emb|AL607007.3|OSJN00118 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0018J12, complete sequence Length = 120004 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| |||| |||||| |||||||| || || |||||| | ||||| |||| |||||| Sbjct: 97845 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 97786 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 || || ||||||||||| | ||| || || |||||||| || |||||||||||||||||| Sbjct: 97785 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 97726 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||||| || |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 97725 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 97666 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | || || || |||| || |||| |||||||||||| || | ||||||||| Sbjct: 97665 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 97606 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 ||||| ||| || ||||||||| ||||||| ||||||||||||||| | ||||||| Sbjct: 97605 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 97546 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 ||||| |||||||| ||||||||||| || ||||||||||| || || |||||||| ||| Sbjct: 97545 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 97486 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 || || || |||||||| ||||| |||||||| |||||||||||||||| Sbjct: 97485 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccc 97437
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| |||| |||||| |||||||| || || |||||| | ||||| |||| |||||| Sbjct: 10117361 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 10117302 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 || || ||||||||||| | ||| || || |||||||| || |||||||||||||||||| Sbjct: 10117301 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 10117242 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||||| || |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 10117241 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 10117182 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | || || || |||| || |||| |||||||||||| || | ||||||||| Sbjct: 10117181 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 10117122 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 ||||| ||| || ||||||||| ||||||| ||||||||||||||| | ||||||| Sbjct: 10117121 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 10117062 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 ||||| |||||||| ||||||||||| || ||||||||||| || || |||||||| ||| Sbjct: 10117061 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 10117002 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 || || || |||||||| ||||| |||||||| |||||||||||||||| Sbjct: 10117001 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccc 10116953 Score = 244 bits (123), Expect = 3e-61 Identities = 339/411 (82%) Strand = Plus / Plus Query: 222 aatacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtccca 281 ||||||| ||||||||||| |||||||||||||| |||||| || || ||||| |||| Sbjct: 28905242 aatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgaccca 28905301 Query: 282 caaaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagag 341 ||||||| ||||||||||||| ||||||||| ||||| || || |||||||||||||| | Sbjct: 28905302 caaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaaggg 28905361 Query: 342 gaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcag 401 | || || || || || |||||||| ||||| |||| |||||||| |||||||| | Sbjct: 28905362 ggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggcgg 28905421 Query: 402 tgttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttct 461 ||||||| | ||||| ||||||| || |||| ||||||||||||||| || ||||| | Sbjct: 28905422 tgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagcttat 28905481 Query: 462 catttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggt 521 |||| || | | || |||||||| ||||||| | |||||||||| || | ||||| Sbjct: 28905482 cattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataaggt 28905541 Query: 522 tgctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgt 581 |||| ||||||||||||||||||||||| || ||||||||||| || || |||||||| | Sbjct: 28905542 tgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattcat 28905601 Query: 582 catcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 |||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 28905602 catcattaccactccatatggttatacctttgtcagtatagcacttaaccc 28905652
>dbj|AK071042.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080C02, full insert sequence Length = 1626 Score = 272 bits (137), Expect = 1e-69 Identities = 341/409 (83%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| |||| |||||| |||||||| || || |||||| | ||||| |||| |||||| Sbjct: 1306 tacctactgaccaacacaaaatcatcgtcgtcaagaacccgtgcctcgttctcacccaca 1247 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 || || ||||||||||| | ||| || || |||||||| || |||||||||||||||||| Sbjct: 1246 aagttttcccgtccaatagattcaacgattcggacaaactctaccctcttttcaagagga 1187 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||||| || |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 1186 agaggtacatatggtaatctgaaaacaggccttaccactccaagctgagccagggcagtg 1127 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 |||||| | || || || |||| || |||| |||||||||||| || | ||||||||| Sbjct: 1126 ttgagagcaattggatttggctggcaaaacaaccatttcatcaggggaaagagcttctca 1067 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 ||||| ||| || ||||||||| ||||||| ||||||||||||||| | ||||||| Sbjct: 1066 tttagcgtcttattctccccttcatacatgagatcgtgcatgagaccaggaataaggttg 1007 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 ||||| |||||||| ||||||||||| || ||||||||||| || || |||||||| ||| Sbjct: 1006 ctagccacagaaataactccagtggcaccatatttccacctagaatcatggcattcatca 947 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 || || || |||||||| ||||| |||||||| |||||||||||||||| Sbjct: 946 tcattaccactccatatggttatacctttgtcagtgtagcacttaaccc 898
>gb|BT016780.1| Zea mays clone Contig613 mRNA sequence Length = 1334 Score = 256 bits (129), Expect = 8e-65 Identities = 339/409 (82%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1150 tacctactgatcaacacgaaatcgtcatcatctagaacctgggcctccttctgccccacg 1091 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 ||||| ||||||||||| | || ||||||||||| || || |||||||||||||||| Sbjct: 1090 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1031 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||| |||| ||||| |||||||| ||||||| ||||| ||||| |||||| Sbjct: 1030 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 971 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 ||||| | || || || |||| |||||||||||||||||||| ||| ||||||||| Sbjct: 970 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 911 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 || || || ||||| || |||| ||||||||||||||||||| || || ||||||||| Sbjct: 910 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 851 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 || | || |||||||| ||||| ||||| | ||||||| | || |||||||| ||||| Sbjct: 850 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 791 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 ||||| |||||||| ||||||||||||||||| | |||| |||||||| Sbjct: 790 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccc 742
>gb|AY107228.1| Zea mays PCO090048 mRNA sequence Length = 1425 Score = 256 bits (129), Expect = 8e-65 Identities = 339/409 (82%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| ||||||||||||||||| |||||||| |||||||||||||||||||| ||||| Sbjct: 1231 tacctactgatcaacacgaaatcgtcatcatctagaacctgggcctccttctgccccacg 1172 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 ||||| ||||||||||| | || ||||||||||| || || |||||||||||||||| Sbjct: 1171 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1112 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||| |||| ||||| |||||||| ||||||| ||||| ||||| |||||| Sbjct: 1111 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 1052 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 ||||| | || || || |||| |||||||||||||||||||| ||| ||||||||| Sbjct: 1051 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 992 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 || || || ||||| || |||| ||||||||||||||||||| || || ||||||||| Sbjct: 991 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 932 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 || | || |||||||| ||||| ||||| | ||||||| | || |||||||| ||||| Sbjct: 931 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 872 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 ||||| |||||||| ||||||||||||||||| | |||| |||||||| Sbjct: 871 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccc 823
>ref|XM_473587.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 244 bits (123), Expect = 3e-61 Identities = 339/411 (82%) Strand = Plus / Minus Query: 222 aatacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtccca 281 ||||||| ||||||||||| |||||||||||||| |||||| || || ||||| |||| Sbjct: 820 aatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgaccca 761 Query: 282 caaaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagag 341 ||||||| ||||||||||||| ||||||||| ||||| || || |||||||||||||| | Sbjct: 760 caaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaaggg 701 Query: 342 gaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcag 401 | || || || || || |||||||| ||||| |||| |||||||| |||||||| | Sbjct: 700 ggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggcgg 641 Query: 402 tgttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttct 461 ||||||| | ||||| ||||||| || |||| ||||||||||||||| || ||||| | Sbjct: 640 tgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagcttat 581 Query: 462 catttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggt 521 |||| || | | || |||||||| ||||||| | |||||||||| || | ||||| Sbjct: 580 cattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataaggt 521 Query: 522 tgctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgt 581 |||| ||||||||||||||||||||||| || ||||||||||| || || |||||||| | Sbjct: 520 tgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattcat 461 Query: 582 catcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 |||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 460 catcattaccactccatatggttatacctttgtcagtatagcacttaaccc 410
>gb|L77616.1| Oryza sativa dihydrodipicolinate synthase gene, complete cds Length = 3116 Score = 244 bits (123), Expect = 3e-61 Identities = 339/411 (82%) Strand = Plus / Minus Query: 222 aatacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtccca 281 ||||||| ||||||||||| |||||||||||||| |||||| || || ||||| |||| Sbjct: 2835 aatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgaccca 2776 Query: 282 caaaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagag 341 ||||||| ||||||||||||| ||||||||| ||||| || || |||||||||||||| | Sbjct: 2775 caaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaaggg 2716 Query: 342 gaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcag 401 | || || || || || |||||||| || || |||| |||||||| |||||||| | Sbjct: 2715 ggagaggtacataaggtaatctgaaaacgggtcttgccactccaagctgagccagggcgg 2656 Query: 402 tgttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttct 461 ||||||| | ||||| ||||||| || |||| ||||||||||||||| || ||||| | Sbjct: 2655 tgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagcttat 2596 Query: 462 catttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggt 521 |||| || | || || |||||||| |||||||||| ||||||||||| || | ||||| Sbjct: 2595 cattgagcgctgcattctccccttcgtacatgaggctatgcatgagaccgggaataaggt 2536 Query: 522 tgctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgt 581 |||| ||||||||||||||||||||||| || ||||||||||| || || |||||||| | Sbjct: 2535 tgctggctacagaaatgactccagtggcaccatatttccacctagactcatggcattcat 2476 Query: 582 catcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 |||| || || |||||||| |||| ||| |||| | ||||||||||||| Sbjct: 2475 catcattaccactccatatgcttattcctctgtcagcatagcacttaaccc 2425
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 244 bits (123), Expect = 3e-61 Identities = 339/411 (82%) Strand = Plus / Plus Query: 222 aatacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtccca 281 ||||||| ||||||||||| |||||||||||||| |||||| || || ||||| |||| Sbjct: 117404 aatacctactgatcaacacaaaatcatcatcatcaagaacccttgcttctttctgaccca 117463 Query: 282 caaaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagag 341 ||||||| ||||||||||||| ||||||||| ||||| || || |||||||||||||| | Sbjct: 117464 caaaattttcccgtccaatggattcgacaattcggacgaactcaaccctcttttcaaggg 117523 Query: 342 gaaggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcag 401 | || || || || || |||||||| ||||| |||| |||||||| |||||||| | Sbjct: 117524 ggagaggtacataaggtaatctgaaaacgggccttgccactccaagctgagccagggcgg 117583 Query: 402 tgttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttct 461 ||||||| | ||||| ||||||| || |||| ||||||||||||||| || ||||| | Sbjct: 117584 tgttgagcgcaatcggattaggctggcaaaacaaccatttcatcagaggaagtagcttat 117643 Query: 462 catttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggt 521 |||| || | | || |||||||| ||||||| | |||||||||| || | ||||| Sbjct: 117644 cattgagcgctgtattctccccttcgtacatgagcttacgcatgagaccgggaataaggt 117703 Query: 522 tgctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgt 581 |||| ||||||||||||||||||||||| || ||||||||||| || || |||||||| | Sbjct: 117704 tgctggctacagaaatgactccagtggcaccatatttccacctagaatcatggcattcat 117763 Query: 582 catcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 |||| || || |||||||| ||||| |||||||| || ||||||||||||| Sbjct: 117764 catcattaccactccatatggttatacctttgtcagtatagcacttaaccc 117814
>emb|X52850.1|ZMDHPS Maize mRNA for dihydrodipicolinate synthase (EC 4.2.1.52) Length = 1400 Score = 240 bits (121), Expect = 5e-60 Identities = 337/409 (82%) Strand = Plus / Minus Query: 224 tacctgctgatcaacacgaaatcatcatcatccagaacctgggcctccttctgtcccaca 283 ||||| ||||||||||||||||| |||||||| |||||| | ||||||||||| ||||| Sbjct: 1178 tacctactgatcaacacgaaatcgtcatcatctagaaccggtgcctccttctgccccacg 1119 Query: 284 aaattctcccgtccaatggcttcgacaatccggacaaattccaccctcttttcaagagga 343 ||||| ||||||||||| | || ||||||||||| || || |||||||||||||||| Sbjct: 1118 aaattttcccgtccaattgactcaacaatccggacgaactcggccctcttttcaagaggg 1059 Query: 344 aggggggtgtatggcaacctgaaaacaggcctcaccacgccaagctgggccagggcagtg 403 || || ||| |||| ||||| |||||||| ||||||| ||||| ||||| |||||| Sbjct: 1058 agcggaacgtacggcagtctgaagacaggccttgccacgccgagctgagccagagcagtg 999 Query: 404 ttgagacctatcgggttaggctcacagaacagccatttcatcagaggcagcagcttctca 463 ||||| | || || || |||| |||||||||||||||||||| ||| ||||||||| Sbjct: 998 ttgagggcaataggatttggctggcagaacagccatttcatcaggggcgacagcttctcg 939 Query: 464 tttagtgtcgcgttgtccccttcaaacatgaggctgtgcatgagaccagggacaaggttg 523 || || || ||||| || |||| ||||||||||||||||||| || || ||||||||| Sbjct: 938 ttcagcgtggcgttctcgcctttgtacatgaggctgtgcatgagcccgggaacaaggttg 879 Query: 524 ctagctacagaaatgactccagtggcgccgtatttccaccttgagtcgtggcattcgtca 583 || | || |||||||| ||||| ||||| | ||||||| | || |||||||| ||||| Sbjct: 878 ctggtaacggaaatgaccccagtagcgccatgtttccacttagaatcgtggcactcgtcg 819 Query: 584 tcgttgccgctccatattgttatgcctttgtcggtgtagcacttaaccc 632 ||||| |||||||| ||||||||||||||||| | |||| |||||||| Sbjct: 818 tcgttaccgctccaaattgttatgcctttgtcagcgtagtgcttaaccc 770
>gb|BC000068.1| Homo sapiens solute carrier family 39 (zinc transporter), member 14, mRNA (cDNA clone IMAGE:3503901), partial cds Length = 1399 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 97 atcatccagaacctgggcctcct 119
>ref|NM_015359.1| Homo sapiens solute carrier family 39 (zinc transporter), member 14 (SLC39A14), mRNA Length = 4627 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 1542 atcatccagaacctgggcctcct 1564
>dbj|AK172810.1| Homo sapiens cDNA FLJ23971 fis, clone HEP18208 Length = 4627 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 1542 atcatccagaacctgggcctcct 1564
>dbj|D31887.1|HUMORFKG1P Homo sapiens KIAA0062 mRNA, partial cds Length = 4573 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 1515 atcatccagaacctgggcctcct 1537
>gb|AF026940.1|AF026940 Homo sapiens cig19 mRNA, partial sequence Length = 594 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 103 atcatccagaacctgggcctcct 125
>gb|AC087854.11| Homo sapiens chromosome 8, clone RP11-382J24, complete sequence Length = 157419 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 250 atcatccagaacctgggcctcct 272 ||||||||||||||||||||||| Sbjct: 105331 atcatccagaacctgggcctcct 105309
>emb|CR859101.1| Pongo pygmaeus mRNA; cDNA DKFZp459H0929 (from clone DKFZp459H0929) Length = 4608 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 tcatccagaacctgggcctcct 272 |||||||||||||||||||||| Sbjct: 1530 tcatccagaacctgggcctcct 1551
>gb|AC089983.23| Homo sapiens 12 BAC RP11-818F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204505 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 ttttcaagaggaaggggggtg 352 ||||||||||||||||||||| Sbjct: 87768 ttttcaagaggaaggggggtg 87788
>emb|X79060.2|NSDHDPSR1 Nicotiana sylvestris dhdps-r1 gene for dihydrodipicolinate synthase Length = 1773 Score = 42.1 bits (21), Expect = 2.2 Identities = 78/97 (80%) Strand = Plus / Minus Query: 501 gcatgagaccagggacaaggttgctagctacagaaatgactccagtggcgccgtatttcc 560 |||| |||||||| || | |||||| | |||||||| ||||| || || || || | || Sbjct: 674 gcatcagaccaggaaccaagttgctggtaacagaaataactcctgtagcaccataatccc 615 Query: 561 accttgagtcgtggcattcgtcatcgttgccgctcca 597 ||||||| | |||||||||||||| ||||| ||||| Sbjct: 614 accttgaaacatggcattcgtcatcattgccactcca 578
>gb|AC023282.8| Homo sapiens chromosome 10 clone RP11-257O17, complete sequence Length = 168319 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 agcatctaaaacgatccacaa 155 ||||||||||||||||||||| Sbjct: 35497 agcatctaaaacgatccacaa 35477
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 attgttatgcctttgtcggtg 619 ||||||||||||||||||||| Sbjct: 37472752 attgttatgcctttgtcggtg 37472772
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 599 attgttatgcctttgtcggtg 619 ||||||||||||||||||||| Sbjct: 67289 attgttatgcctttgtcggtg 67309
>ref|XM_593460.2| PREDICTED: Bos taurus similar to solute carrier family 39 (zinc transporter), member 14 (LOC515437), mRNA Length = 1677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcatccagaacctgggcctc 270 |||||||||||||||||||| Sbjct: 1595 tcatccagaacctgggcctc 1614
>ref|XM_844442.1| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 14, transcript variant 3 (LOC486124), mRNA Length = 1473 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcatccagaacctgggcctc 270 |||||||||||||||||||| Sbjct: 1391 tcatccagaacctgggcctc 1410
>ref|XM_543250.2| PREDICTED: Canis familiaris similar to solute carrier family 39 (zinc transporter), member 14, transcript variant 1 (LOC486124), mRNA Length = 1473 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tcatccagaacctgggcctc 270 |||||||||||||||||||| Sbjct: 1391 tcatccagaacctgggcctc 1410
>gb|AC102083.12| Mus musculus chromosome 16, clone RP23-269L18, complete sequence Length = 205875 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 63 gaagaaaccaaacgggttcaaaat 86 |||||||||||| ||||||||||| Sbjct: 75971 gaagaaaccaaatgggttcaaaat 75948
>gb|AC116651.6| Homo sapiens BAC clone RP11-799M12 from 4, complete sequence Length = 61067 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 ttcaaaattaacatgcagtc 98 |||||||||||||||||||| Sbjct: 37211 ttcaaaattaacatgcagtc 37192
>emb|AL022161.1|HS380C13 Human DNA sequence from clone RP3-380C13 on chromosome Xq22.1-22.3 Contains a calmodulin 2 (phosphorylase kinase, delta) (CALM2) pseudogene, complete sequence Length = 139444 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gaaatcatcatcatccagaa 260 |||||||||||||||||||| Sbjct: 23722 gaaatcatcatcatccagaa 23703
>gb|AF533976.1| Oreochromis niloticus unknown sequence Length = 99935 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 taacatgcagtcagagaaaa 106 |||||||||||||||||||| Sbjct: 55290 taacatgcagtcagagaaaa 55309
>gb|AC145203.1| Homo sapiens chromosome 19 clone XXfos-800752H11, complete sequence Length = 41422 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tttcaagaggaaggggggtg 352 |||||||||||||||||||| Sbjct: 36563 tttcaagaggaaggggggtg 36544
>emb|AL954174.5| Mouse DNA sequence from clone RP23-282D21 on chromosome 4, complete sequence Length = 94294 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 attcaatacctgctgatcaa 237 |||||||||||||||||||| Sbjct: 26894 attcaatacctgctgatcaa 26913
>dbj|AK143920.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520013M09 product:weakly similar to Ornithine decarboxylase 1 (Fragment) [Pan troglodytes], full insert sequence Length = 2209 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctgggccagggcagtgttga 407 |||||||||||||||||||| Sbjct: 990 ctgggccagggcagtgttga 971
>gb|AC092315.2| Homo sapiens chromosome 19 clone LLNLR-306A10, complete sequence Length = 44735 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 tttcaagaggaaggggggtg 352 |||||||||||||||||||| Sbjct: 44657 tttcaagaggaaggggggtg 44638
>gb|AC090430.7| Mus Musculus Strain C57BL6/J chromosome 10 BAC, RP23-131G5, complete sequence Length = 185453 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 aacctgaaaacaggcctcac 378 |||||||||||||||||||| Sbjct: 117690 aacctgaaaacaggcctcac 117671
>ref|NM_001034872.1| Mus musculus gene model 853, (NCBI) (Gm853), mRNA Length = 2209 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 ctgggccagggcagtgttga 407 |||||||||||||||||||| Sbjct: 990 ctgggccagggcagtgttga 971
>dbj|AP003034.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-347E24, complete sequence Length = 158780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 caaaattaacatgcagtcag 100 |||||||||||||||||||| Sbjct: 50792 caaaattaacatgcagtcag 50811
>emb|AL606925.16| Mouse DNA sequence from clone RP23-12J1 on chromosome 4, complete sequence Length = 239244 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ctgggccagggcagtgttga 407 |||||||||||||||||||| Sbjct: 180821 ctgggccagggcagtgttga 180840 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,365,038 Number of Sequences: 3902068 Number of extensions: 5365038 Number of successful extensions: 100334 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100182 Number of HSP's gapped (non-prelim): 136 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)