| Clone Name | rbags19c20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF161719.1|AF161719 Triticum aestivum vacuolar targeting receptor bp-80 mRNA, complete cds Length = 2293 Score = 781 bits (394), Expect = 0.0 Identities = 436/450 (96%) Strand = Plus / Minus Query: 229 gtgccatctggtctcagatatcaccagcatgcgccacatgctgttgctggtttgcacctt 288 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1948 gtgccatctggtctcagatatcaccagcatgcgcgacatgctgttgctggtttgcgcctt 1889 Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1888 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtaac 1829 Query: 349 tccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaaga 408 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 1828 tccgtagcctgtatttgtacactgcatatgctccgaccccggcaaatacaagtccgaaga 1769 Query: 409 aaataacccacatgaagctccacccgactgaggaggcagcttgcttgctgatgcacgtgt 468 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 1768 aaataacccacatgaagctccagccgactgaggaggcagcttgtttgctgatgcacgtgt 1709 Query: 469 cttgctctctcatgtataacatgttgctgctaccacagctgcattcgtagcttccccatg 528 |||||||||||||||||||||||||| | | ||||||||||||||| ||||||||||||| Sbjct: 1708 cttgctctctcatgtataacatgttgttaccaccacagctgcattcatagcttccccatg 1649 Query: 529 tattttcgcaactgcagccattgcactgacaggcagatttcgttttgcattcatcaatat 588 |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1648 tattctcgcaactgcagccattgcactgacaggcagatttcgctttgcattcatcaatat 1589 Query: 589 cttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttcagatt 648 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1588 cttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcaaccttcagatt 1529 Query: 649 cttcatgcgagcaggcagatattgtcttcc 678 |||||||||||||||||||||||||||||| Sbjct: 1528 cttcatgcgagcaggcagatattgtcttcc 1499 Score = 147 bits (74), Expect = 6e-32 Identities = 120/134 (89%), Gaps = 6/134 (4%) Strand = Plus / Minus Query: 74 gacaatatc-gcctatactgttcatcgtgtctcacaaaatgaaggtgcacaacagtgtaa 132 ||||||||| |||||| ||| ||||| ||||||||||||||||| ||||||||| |||| Sbjct: 2129 gacaatatccgcctatgctgggcatcgggtctcacaaaatgaaggggcacaacagggtaa 2070 Query: 133 ctcctagaatcatacatcaaatctcctcgcgtacaaattgtatcttt-----gcgctgta 187 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 2069 ctcctagaatcatacatcaaatctcctcgcgtacaaaccgtatctttgcttcgcgctgta 2010 Query: 188 aagccgacgccacc 201 |||||||||||||| Sbjct: 2009 aagccgacgccacc 1996 Score = 87.7 bits (44), Expect = 4e-14 Identities = 70/78 (89%), Gaps = 8/78 (10%) Strand = Plus / Minus Query: 3 gtctgaacaccaagtatttacaggatgttgacacgta-------cgtagtatgcaa-gag 54 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 2221 gtctgaacaccaagtatttacaggatgttgacacgtagaacgttcgtagtatgcaatgag 2162 Query: 55 tctagagccgacaaaggg 72 |||||||||||||||||| Sbjct: 2161 tctagagccgacaaaggg 2144
>dbj|AK121413.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133A05, full insert sequence Length = 2546 Score = 339 bits (171), Expect = 7e-90 Identities = 365/429 (85%), Gaps = 3/429 (0%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2174 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2118 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 367 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2117 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2058 Query: 368 tactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatgaagct 427 || ||||||||||||||||| |||| ||||||||||||||||||||||||| || || Sbjct: 2057 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccacagaaaact 1998 Query: 428 ccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatgtataa 487 ||| || || | || | ||| | |||||||| || ||||| ||||||||||||||||| Sbjct: 1997 ccagccaacagctgacgtagcctccttgctgagacaagtgtcatgctctctcatgtataa 1938 Query: 488 catgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactgcagcc 547 ||||||| | | ||||| ||||| || ||||| ||||||||||| || || |||||||| Sbjct: 1937 catgttgttaccgccacaactgcactcatagctaccccatgtattctcacagctgcagcc 1878 Query: 548 attgcactgacaggcagatttcgttttgcattcatcaatatcttcacagctttttacacc 607 ||||| |||||| | ||| ||||||||||||||||||||||| ||||||| || Sbjct: 1877 cttgcattgacagtaaagtttttccttgcattcatcaatatcttcacaactttttattcc 1818 Query: 608 atcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcaggcaga 667 ||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1817 atcacccttgaaacctggtggacatttgcagccttcagatacttcatttgagcaggcaga 1758 Query: 668 tattgtctt 676 ||||||||| Sbjct: 1757 tattgtctt 1749
>dbj|AK098846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C17, full insert sequence Length = 2527 Score = 339 bits (171), Expect = 7e-90 Identities = 365/429 (85%), Gaps = 3/429 (0%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2126 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2070 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 367 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2069 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2010 Query: 368 tactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatgaagct 427 || ||||||||||||||||| |||| ||||||||||||||||||||||||| || || Sbjct: 2009 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccacagaaaact 1950 Query: 428 ccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatgtataa 487 ||| || || | || | ||| | |||||||| || ||||| ||||||||||||||||| Sbjct: 1949 ccagccaacagctgacgtagcctccttgctgagacaagtgtcatgctctctcatgtataa 1890 Query: 488 catgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactgcagcc 547 ||||||| | | ||||| ||||| || ||||| ||||||||||| || || |||||||| Sbjct: 1889 catgttgttaccgccacaactgcactcatagctaccccatgtattctcacagctgcagcc 1830 Query: 548 attgcactgacaggcagatttcgttttgcattcatcaatatcttcacagctttttacacc 607 ||||| |||||| | ||| ||||||||||||||||||||||| ||||||| || Sbjct: 1829 cttgcattgacagtaaagtttttccttgcattcatcaatatcttcacaactttttattcc 1770 Query: 608 atcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcaggcaga 667 ||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1769 atcacccttgaaacctggtggacatttgcagccttcagatacttcatttgagcaggcaga 1710 Query: 668 tattgtctt 676 ||||||||| Sbjct: 1709 tattgtctt 1701
>dbj|AK111509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001G14, full insert sequence Length = 2546 Score = 331 bits (167), Expect = 2e-87 Identities = 364/429 (84%), Gaps = 3/429 (0%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2174 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2118 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 367 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2117 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2058 Query: 368 tactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatgaagct 427 || ||||||||||||||||| |||| ||||||||||||||||||||||||| || || Sbjct: 2057 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccacagaaaact 1998 Query: 428 ccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatgtataa 487 | | || || | || | ||| | |||||||| || ||||| ||||||||||||||||| Sbjct: 1997 ctagccaacagctgacgtagcctccttgctgagacaagtgtcatgctctctcatgtataa 1938 Query: 488 catgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactgcagcc 547 ||||||| | | ||||| ||||| || ||||| ||||||||||| || || |||||||| Sbjct: 1937 catgttgttaccgccacaactgcactcatagctaccccatgtattctcacagctgcagcc 1878 Query: 548 attgcactgacaggcagatttcgttttgcattcatcaatatcttcacagctttttacacc 607 ||||| |||||| | ||| ||||||||||||||||||||||| ||||||| || Sbjct: 1877 cttgcattgacagtaaagtttttccttgcattcatcaatatcttcacaactttttattcc 1818 Query: 608 atcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcaggcaga 667 ||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1817 atcacccttgaaacctggtggacatttgcagccttcagatacttcatttgagcaggcaga 1758 Query: 668 tattgtctt 676 ||||||||| Sbjct: 1757 tattgtctt 1749
>dbj|AK098891.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M02, full insert sequence Length = 2508 Score = 331 bits (167), Expect = 2e-87 Identities = 364/429 (84%), Gaps = 3/429 (0%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 2137 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 2081 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtatttgta 367 |||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 2080 gtactgggccatgatcgcgcgaatctccgaatccatgtagctccgtagcctgtatttata 2021 Query: 368 tactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatgaagct 427 || ||||||||||||||||| |||| ||||||||||||||||||||||||| || || Sbjct: 2020 caccgcatatgctccgaccccagcaagaacaagtccaaagaaaataacccacagaaaact 1961 Query: 428 ccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatgtataa 487 ||| || || | | | ||| | |||||||| || ||||| ||||||||||||||||| Sbjct: 1960 ccagccaacagctaacgtagcctccttgctgagacaagtgtcatgctctctcatgtataa 1901 Query: 488 catgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactgcagcc 547 ||||||| | | ||||| ||||| || ||||| ||||||||||| || || |||||||| Sbjct: 1900 catgttgttaccgccacaactgcactcatagctaccccatgtattctcacagctgcagcc 1841 Query: 548 attgcactgacaggcagatttcgttttgcattcatcaatatcttcacagctttttacacc 607 ||||| |||||| | ||| ||||||||||||||||||||||| ||||||| || Sbjct: 1840 cttgcattgacagtaaagtttttccttgcattcatcaatatcttcacaactttttattcc 1781 Query: 608 atcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcaggcaga 667 ||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1780 atcacccttgaaacctggtggacatttgcagccttcagatacttcatttgagcaggcaga 1721 Query: 668 tattgtctt 676 ||||||||| Sbjct: 1720 tattgtctt 1712
>gb|AY105262.1| Zea mays PCO087823 mRNA sequence Length = 1974 Score = 268 bits (135), Expect = 2e-68 Identities = 341/409 (83%), Gaps = 3/409 (0%) Strand = Plus / Minus Query: 273 tgctggtttgcaccttcttggctgtccaaaggcatgtactgagccatgatggcgcggatc 332 ||||||||||| ||||||||| | |||| |||||||||||||||||||||||| |||||| Sbjct: 1523 tgctggtttgctccttcttggttatccagaggcatgtactgagccatgatggcacggatc 1464 Query: 333 tccgaatccatgtagctccgtagcctgtatttgtatactgcatatgctccgaccccggca 392 || ||||||||||| ||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 1463 tctgaatccatgtaactccgcagcctgtatttgtacacagcgtatgctccaaccccggca 1404 Query: 393 aatacaagtccaaagaaaataacccacatgaagctccacccgactgaggaggcag---ct 449 || ||||||||||||||||||||||| | ||||||||| || || | | ||||| | Sbjct: 1403 aaaacaagtccaaagaaaataacccagaggaagctccagccaacagtagtggcagttccc 1344 Query: 450 tgcttgctgatgcacgtgtcttgctctctcatgtataacatgttgctgctaccacagctg 509 | ||||||||||| ||||| |||||||||||||||| ||| ||| |||||||||| Sbjct: 1343 tctttgctgatgcaagtgtcatgctctctcatgtatagcatattgtcatcaccacagctg 1284 Query: 510 cattcgtagcttccccatgtattttcgcaactgcagccattgcactgacaggcagatttc 569 ||||| ||||||||||| ||||| | ||| ||||| || ||||||||||| | |||| Sbjct: 1283 cattcatagcttccccacgtattcttgcagctgcaacccttgcactgacaataaagtttc 1224 Query: 570 gttttgcattcatcaatatcttcacagctttttacaccatcgcccttgaaaccttgtgga 629 || |||||||||||| |||||||| |||||| | ||||| ||||||||||| |||| Sbjct: 1223 tcttggcattcatcaatgtcttcacaacttttttctccatcacccttgaaacccattgga 1164 Query: 630 catttgcagccttcagattcttcatgcgagcaggcagatattgtcttcc 678 ||||| || ||||||||| ||| | ||||||||||| ||||| |||| Sbjct: 1163 catttacaaccttcagatatttcgtttgagcaggcagagattgttttcc 1115
>gb|U79961.1|ZMU79961 Zea mays vacuolar sorting receptor homolog mRNA, partial cds Length = 822 Score = 260 bits (131), Expect = 5e-66 Identities = 340/409 (83%), Gaps = 3/409 (0%) Strand = Plus / Minus Query: 273 tgctggtttgcaccttcttggctgtccaaaggcatgtactgagccatgatggcgcggatc 332 ||||||||||| ||| ||||| | |||| |||||||||||||||||||||||| |||||| Sbjct: 431 tgctggtttgctcctacttggttatccagaggcatgtactgagccatgatggcacggatc 372 Query: 333 tccgaatccatgtagctccgtagcctgtatttgtatactgcatatgctccgaccccggca 392 || ||||||||||| ||||| |||||||||||||| || || |||||||| ||||||||| Sbjct: 371 tctgaatccatgtaactccgcagcctgtatttgtacacagcgtatgctccaaccccggca 312 Query: 393 aatacaagtccaaagaaaataacccacatgaagctccacccgactgaggaggcag---ct 449 || ||||||||||||||||||||||| | ||||||||| || || | | ||||| | Sbjct: 311 aaaacaagtccaaagaaaataacccagaggaagctccagccaacagtagtggcagttccc 252 Query: 450 tgcttgctgatgcacgtgtcttgctctctcatgtataacatgttgctgctaccacagctg 509 | ||||||||||| ||||| |||||||||||||||| ||| ||| |||||||||| Sbjct: 251 tctttgctgatgcaagtgtcatgctctctcatgtatagcatattgtcatcaccacagctg 192 Query: 510 cattcgtagcttccccatgtattttcgcaactgcagccattgcactgacaggcagatttc 569 ||||| ||||||||||| ||||| | ||| ||||| || ||||||||||| | |||| Sbjct: 191 cattcatagcttccccacgtattcttgcagctgcaacccttgcactgacaataaagtttc 132 Query: 570 gttttgcattcatcaatatcttcacagctttttacaccatcgcccttgaaaccttgtgga 629 || |||||||||||| |||||||| |||||| | ||||| ||||||||||| |||| Sbjct: 131 tcttggcattcatcaatgtcttcacaacttttttctccatcacccttgaaacccactgga 72 Query: 630 catttgcagccttcagattcttcatgcgagcaggcagatattgtcttcc 678 ||||| || ||||||||| ||| | ||||||||||| ||||| |||| Sbjct: 71 catttacaaccttcagatatttcgtttgagcaggcagagattgttttcc 23
>ref|XM_479541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2450 Score = 248 bits (125), Expect = 2e-62 Identities = 305/365 (83%) Strand = Plus / Minus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtat 362 |||||||||||||||||||| || || ||||| ||||||||||| |||||||||| ||| Sbjct: 2019 ggcatgtactgagccatgatcgcacgaatctctgaatccatgtaactccgtagccgatat 1960 Query: 363 ttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatg 422 |||||||| ||||||||||| | || || || | || ||||||||||||||||| | | Sbjct: 1959 ttgtatacggcatatgctccaattccagccaaagcgaggccaaagaaaataacccaaagg 1900 Query: 423 aagctccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatg 482 |||| ||| || ||||| || | ||| ||||||||||| ||||| |||||||||||| Sbjct: 1899 aagccccagcccactgacgaagaagcaactttgctgatgcaagtgtcatgctctctcatg 1840 Query: 483 tataacatgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactg 542 |||||||| || || | |||||||||||| || ||||||||||||||||| || ||| | Sbjct: 1839 tataacatattacttccaccacagctgcactcatagcttccccatgtattctcacaagag 1780 Query: 543 cagccattgcactgacaggcagatttcgttttgcattcatcaatatcttcacagcttttt 602 ||| | |||||||| ||| | || |||||||||||||||||||||||| |||||| Sbjct: 1779 cagtccttgcactggcagaaaagcttgtctttgcattcatcaatatcttcacaacttttt 1720 Query: 603 acaccatcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcag 662 | |||||| |||||||||||| |||| ||||||||||||| ||||||||||| |||||| Sbjct: 1719 ataccatcacccttgaaacctggtgggcatttgcagcctttagattcttcatttgagcag 1660 Query: 663 gcaga 667 ||||| Sbjct: 1659 gcaga 1655
>dbj|AK072667.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134F15, full insert sequence Length = 2450 Score = 248 bits (125), Expect = 2e-62 Identities = 305/365 (83%) Strand = Plus / Minus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagcctgtat 362 |||||||||||||||||||| || || ||||| ||||||||||| |||||||||| ||| Sbjct: 2019 ggcatgtactgagccatgatcgcacgaatctctgaatccatgtaactccgtagccgatat 1960 Query: 363 ttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaaaataacccacatg 422 |||||||| ||||||||||| | || || || | || ||||||||||||||||| | | Sbjct: 1959 ttgtatacggcatatgctccaattccagccaaagcgaggccaaagaaaataacccaaagg 1900 Query: 423 aagctccacccgactgaggaggcagcttgcttgctgatgcacgtgtcttgctctctcatg 482 |||| ||| || ||||| || | ||| ||||||||||| ||||| |||||||||||| Sbjct: 1899 aagccccagcccactgacgaagaagcaactttgctgatgcaagtgtcatgctctctcatg 1840 Query: 483 tataacatgttgctgctaccacagctgcattcgtagcttccccatgtattttcgcaactg 542 |||||||| || || | |||||||||||| || ||||||||||||||||| || ||| | Sbjct: 1839 tataacatattacttccaccacagctgcactcatagcttccccatgtattctcacaagag 1780 Query: 543 cagccattgcactgacaggcagatttcgttttgcattcatcaatatcttcacagcttttt 602 ||| | |||||||| ||| | || |||||||||||||||||||||||| |||||| Sbjct: 1779 cagtccttgcactggcagaaaagcttgtctttgcattcatcaatatcttcacaacttttt 1720 Query: 603 acaccatcgcccttgaaaccttgtggacatttgcagccttcagattcttcatgcgagcag 662 | |||||| |||||||||||| |||| ||||||||||||| ||||||||||| |||||| Sbjct: 1719 ataccatcacccttgaaacctggtgggcatttgcagcctttagattcttcatttgagcag 1660 Query: 663 gcaga 667 ||||| Sbjct: 1659 gcaga 1655
>gb|BT017302.1| Zea mays clone EL01N0316C05.c mRNA sequence Length = 622 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| | Sbjct: 260 cttggctgtccaaaggcatgtactgggccatgatggcgcggatctccgagtccatgtacc 201 Query: 349 tccgtagcctgtatttgta 367 |||| | |||||| ||||| Sbjct: 200 tccggatcctgtacttgta 182
>gb|AY104972.1| Zea mays PCO068557 mRNA sequence Length = 1725 Score = 101 bits (51), Expect = 3e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| | Sbjct: 1524 cttggctgtccagaggcatgtactgggccatgatggcgcggatctccgagtccatgtacc 1465 Query: 349 tccgtagcctgtatttgta 367 |||| | |||||| ||||| Sbjct: 1464 tccggatcctgtacttgta 1446
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 5e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 12381197 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 12381141 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctc 350 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 12381140 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 12381098 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 ||||||||||||||| || || ||||||||||||||||| |||| |||||||||||||| Sbjct: 12380974 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 12380915 Query: 410 aataacccaca 420 ||||||||||| Sbjct: 12380914 aataacccaca 12380904 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 584 aatatcttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttc 643 |||| ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||| Sbjct: 12379077 aataccttcacaactttttattccatcacccttgaaacctggtggacatttgcagccttc 12379018 Query: 644 agattcttcat 654 |||| |||||| Sbjct: 12379017 agatacttcat 12379007 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 465 gtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcgtagcttccc 524 ||||| |||||||||||||||||||||||| | | ||||| ||||| || ||||| ||| Sbjct: 12379647 gtgtcatgctctctcatgtataacatgttgttaccgccacaactgcactcatagctaccc 12379588 Query: 525 catgtattttcgcaactgcagccattgcactgacag 560 |||||||| || || |||||||| ||||| |||||| Sbjct: 12379587 catgtattctcacagctgcagcccttgcattgacag 12379552 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 gagcaggcagatattgtctt 676 |||||||||||||||||||| Sbjct: 12378923 gagcaggcagatattgtctt 12378904
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 97.6 bits (49), Expect = 5e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 40215 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 40159 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctc 350 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 40158 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 40116 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 ||||||||||||||| || || ||||||||||||||||| |||| |||||||||||||| Sbjct: 39992 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 39933 Query: 410 aataacccaca 420 ||||||||||| Sbjct: 39932 aataacccaca 39922 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 584 aatatcttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttc 643 |||| ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||| Sbjct: 38095 aataccttcacaactttttattccatcacccttgaaacctggtggacatttgcagccttc 38036 Query: 644 agattcttcat 654 |||| |||||| Sbjct: 38035 agatacttcat 38025 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 465 gtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcgtagcttccc 524 ||||| |||||||||||||||||||||||| | | ||||| ||||| || ||||| ||| Sbjct: 38665 gtgtcatgctctctcatgtataacatgttgttaccgccacaactgcactcatagctaccc 38606 Query: 525 catgtattttcgcaactgcagccattgcactgacag 560 |||||||| || || |||||||| ||||| |||||| Sbjct: 38605 catgtattctcacagctgcagcccttgcattgacag 38570 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 gagcaggcagatattgtctt 676 |||||||||||||||||||| Sbjct: 37941 gagcaggcagatattgtctt 37922
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 5e-17 Identities = 90/103 (87%), Gaps = 3/103 (2%) Strand = Plus / Minus Query: 248 atcaccagcatgcgccacatgctgttgctggtttgcaccttcttggctgtccaaaggcat 307 ||||||||||||||| ||||| ||||| ||| || |||||||| | ||||||||||| Sbjct: 12377960 atcaccagcatgcgcgacatgatgttg---gttagctgcttcttggttatccaaaggcat 12377904 Query: 308 gtactgagccatgatggcgcggatctccgaatccatgtagctc 350 |||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 12377903 gtactgggccatgatcgcgcgaatctccgaatccatgtagctc 12377861 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 ||||||||||||||| || || ||||||||||||||||| |||| |||||||||||||| Sbjct: 12377737 ccgtagcctgtatttatacaccgcatatgctccgaccccagcaagaacaagtccaaagaa 12377678 Query: 410 aataacccaca 420 ||||||||||| Sbjct: 12377677 aataacccaca 12377667 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 584 aatatcttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttc 643 |||| ||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||| Sbjct: 12375840 aataccttcacaactttttattccatcacccttgaaacctggtggacatttgcagccttc 12375781 Query: 644 agattcttcat 654 |||| |||||| Sbjct: 12375780 agatacttcat 12375770 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Minus Query: 465 gtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcgtagcttccc 524 ||||| |||||||||||||||||||||||| | | ||||| ||||| || ||||| ||| Sbjct: 12376410 gtgtcatgctctctcatgtataacatgttgttaccgccacaactgcactcatagctaccc 12376351 Query: 525 catgtattttcgcaactgcagccattgcactgacag 560 |||||||| || || |||||||| ||||| |||||| Sbjct: 12376350 catgtattctcacagctgcagcccttgcattgacag 12376315 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 657 gagcaggcagatattgtctt 676 |||||||||||||||||||| Sbjct: 12375686 gagcaggcagatattgtctt 12375667
>dbj|AK102691.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103D10, full insert sequence Length = 2549 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 2089 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgtacc 2030 Query: 349 tccgtagcctgtatttgtatactgc 373 |||| | |||||| ||||||||||| Sbjct: 2029 tccggatcctgtacttgtatactgc 2005 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 ttgcattcatcaatatcttc 592 |||||||||||||||||||| Sbjct: 1808 ttgcattcatcaatatcttc 1789
>dbj|AK066617.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073B02, full insert sequence Length = 2553 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 2150 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgtacc 2091 Query: 349 tccgtagcctgtatttgtatactgc 373 |||| | |||||| ||||||||||| Sbjct: 2090 tccggatcctgtacttgtatactgc 2066 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 573 ttgcattcatcaatatcttc 592 |||||||||||||||||||| Sbjct: 1869 ttgcattcatcaatatcttc 1850
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 456 ctgatgcacgtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcg 515 |||||||| ||||| |||||||||||||||||||| || || | |||||||||||| || Sbjct: 28757113 ctgatgcaagtgtcatgctctctcatgtataacatattacttccaccacagctgcactca 28757172 Query: 516 tagcttccccatgtatt 532 ||||||||||||||||| Sbjct: 28757173 tagcttccccatgtatt 28757189 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 589 cttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttcagatt 648 ||||||| ||||||| |||||| |||||||||||| |||| ||||||||||||| ||||| Sbjct: 28757412 cttcacaactttttataccatcacccttgaaacctggtgggcatttgcagcctttagatt 28757471 Query: 649 cttcat 654 |||||| Sbjct: 28757472 cttcat 28757477 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 28756389 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 28756432 Score = 44.1 bits (22), Expect = 0.59 Identities = 73/90 (81%) Strand = Plus / Plus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 |||||||| ||||||||||| ||||||||||| | || || || | || |||||||| Sbjct: 28756558 ccgtagccgatatttgtatacggcatatgctccaattccagccaaagcgaggccaaagaa 28756617 Query: 410 aataacccacatgaagctccacccgactga 439 ||||||||| | ||||| ||| || ||||| Sbjct: 28756618 aataacccaaaggaagccccagcccactga 28756647
>dbj|AP005243.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1205_F02 Length = 112862 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 456 ctgatgcacgtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcg 515 |||||||| ||||| |||||||||||||||||||| || || | |||||||||||| || Sbjct: 64674 ctgatgcaagtgtcatgctctctcatgtataacatattacttccaccacagctgcactca 64733 Query: 516 tagcttccccatgtatt 532 ||||||||||||||||| Sbjct: 64734 tagcttccccatgtatt 64750 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 589 cttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttcagatt 648 ||||||| ||||||| |||||| |||||||||||| |||| ||||||||||||| ||||| Sbjct: 64973 cttcacaactttttataccatcacccttgaaacctggtgggcatttgcagcctttagatt 65032 Query: 649 cttcat 654 |||||| Sbjct: 65033 cttcat 65038 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 63950 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 63993 Score = 44.1 bits (22), Expect = 0.59 Identities = 73/90 (81%) Strand = Plus / Plus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 |||||||| ||||||||||| ||||||||||| | || || || | || |||||||| Sbjct: 64119 ccgtagccgatatttgtatacggcatatgctccaattccagccaaagcgaggccaaagaa 64178 Query: 410 aataacccacatgaagctccacccgactga 439 ||||||||| | ||||| ||| || ||||| Sbjct: 64179 aataacccaaaggaagccccagcccactga 64208
>dbj|AP005099.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008J01 Length = 159900 Score = 89.7 bits (45), Expect = 1e-14 Identities = 69/77 (89%) Strand = Plus / Plus Query: 456 ctgatgcacgtgtcttgctctctcatgtataacatgttgctgctaccacagctgcattcg 515 |||||||| ||||| |||||||||||||||||||| || || | |||||||||||| || Sbjct: 14799 ctgatgcaagtgtcatgctctctcatgtataacatattacttccaccacagctgcactca 14858 Query: 516 tagcttccccatgtatt 532 ||||||||||||||||| Sbjct: 14859 tagcttccccatgtatt 14875 Score = 83.8 bits (42), Expect = 7e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 589 cttcacagctttttacaccatcgcccttgaaaccttgtggacatttgcagccttcagatt 648 ||||||| ||||||| |||||| |||||||||||| |||| ||||||||||||| ||||| Sbjct: 15098 cttcacaactttttataccatcacccttgaaacctggtgggcatttgcagcctttagatt 15157 Query: 649 cttcat 654 |||||| Sbjct: 15158 cttcat 15163 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 14075 ggcatgtactgagccatgatcgcacgaatctctgaatccatgta 14118 Score = 44.1 bits (22), Expect = 0.59 Identities = 73/90 (81%) Strand = Plus / Plus Query: 350 ccgtagcctgtatttgtatactgcatatgctccgaccccggcaaatacaagtccaaagaa 409 |||||||| ||||||||||| ||||||||||| | || || || | || |||||||| Sbjct: 14244 ccgtagccgatatttgtatacggcatatgctccaattccagccaaagcgaggccaaagaa 14303 Query: 410 aataacccacatgaagctccacccgactga 439 ||||||||| | ||||| ||| || ||||| Sbjct: 14304 aataacccaaaggaagccccagcccactga 14333
>gb|AY110802.1| Zea mays CL50258_1 mRNA sequence Length = 661 Score = 89.7 bits (45), Expect = 1e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 ||||| |||||| ||||||||||||||||||||||| |||||||| || |||||||| | Sbjct: 261 cttggttgtccaggggcatgtactgagccatgatggcacggatctcggagtccatgtacc 320 Query: 349 tccgtagcctgtatttgtatactgcatat 377 |||| | |||||| ||||| ||||||||| Sbjct: 321 tccggatcctgtacttgtacactgcatat 349
>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0004B05, complete sequence Length = 121223 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 20554 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 20611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 783000 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 783057
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 742261 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 742318
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 742263 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 742320
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 783000 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 783057
>emb|BX842244.3|CNS0B0PN Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0006G23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 12281 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 4772 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 4829
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| |||||| ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 711 cttggttgtccaggggcatgtactgggccatgatggcgcggatctctgaatccatgta 654
>dbj|AB006809.1| Cucurbita cv. Kurokawa Amakuri mRNA for PV72, complete cds Length = 2190 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 ||||| ||||||| ||||| || |||||||||||||| || |||||||||||||| || | Sbjct: 1875 cttggttgtccaagggcatatattgagccatgatggcccgtatctccgaatccatatacc 1816 Query: 349 tccgtagcctgtatttgtatactgcatat 377 |||| | ||||||||||| | ||||||| Sbjct: 1815 tccggattctgtatttgtaaattgcatat 1787
>ref|NM_179624.1| Arabidopsis thaliana calcium ion binding / peptidase AT2G14740 transcript variant AT2G14740.2 mRNA, complete cds Length = 2080 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagct 349 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgtattg 1789 Query: 350 ccgtagcctgtatttgta 367 || |||||| |||||||| Sbjct: 1788 ccttagcctatatttgta 1771
>ref|NM_127038.1| Arabidopsis thaliana calcium ion binding / peptidase AT2G14740 transcript variant AT2G14740.1 mRNA, complete cds Length = 2173 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagct 349 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgtattg 1789 Query: 350 ccgtagcctgtatttgta 367 || |||||| |||||||| Sbjct: 1788 ccttagcctatatttgta 1771
>gb|AC005398.3| Arabidopsis thaliana chromosome 2 clone T6B13 map mi398, complete sequence Length = 92524 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2616 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgta 2672 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 13963 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 13907
>gb|AC004705.3| Arabidopsis thaliana chromosome 2 clone F26C24 map mi398, complete sequence Length = 89840 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 75988 ttggctgtccaatggcatgtactgtgccattatggctctgatctctgagtccatgta 76044 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 87335 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 87279
>gb|DQ294283.1| Solanum tuberosum clone 131D12 vacuolar sorting receptor protein PV72-like protein mRNA, complete cds Length = 2269 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 573 ttgcattcatcaatatcttcacagctttttacaccatcgcccttgaaaccttgtggacat 632 ||||||||||||||||| ||||| || || || ||||| || ||||| ||| |||||||| Sbjct: 1683 ttgcattcatcaatatcctcacaactgttaactccatcccctttgaatcctggtggacat 1624 Query: 633 ttgca 637 ||||| Sbjct: 1623 ttgca 1619 Score = 48.1 bits (24), Expect = 0.038 Identities = 48/56 (85%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccg 352 ||||||||||| || || ||||||||||| || ||||| || |||||||| ||||| Sbjct: 1956 tccaaaggcatatattgtgccatgatggcacgaatctctgagtccatgtatctccg 1901
>gb|AF209910.1|AF209910 Prunus dulcis vacuolar sorting receptor protein mRNA, partial cds Length = 883 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 572 tttgcattcatcaatatcttcacagctttttacaccatc 610 |||||||||||||| ||||||||| ||||| |||||||| Sbjct: 159 tttgcattcatcaacatcttcacaacttttgacaccatc 121
>gb|U79958.1|PSU79958 Pisum sativum BP-80 vacuolar sorting receptor mRNA, complete cds Length = 1931 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 572 tttgcattcatcaatatcttcacagctttttacaccatc 610 ||||||||||||||| |||||||| ||||||||||||| Sbjct: 1557 tttgcattcatcaatgtcttcacaattttttacaccatc 1519 Score = 50.1 bits (25), Expect = 0.010 Identities = 52/61 (85%) Strand = Plus / Minus Query: 286 cttcttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgt 345 |||||||||||||||| ||||| || || |||||||| || | ||| || |||||||||| Sbjct: 1843 cttcttggctgtccaagggcatatattgtgccatgattgctctgatttcagaatccatgt 1784 Query: 346 a 346 | Sbjct: 1783 a 1783
>dbj|AP006374.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT47L09, TM0218, complete sequence Length = 113213 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccat 343 |||| |||||||| ||||||||||| ||||||||||| | ||| || |||||||| Sbjct: 50893 cttgactgtccaagggcatgtactgtgccatgatggctctgatttctgaatccat 50839
>gb|AY017377.1| Physcomitrella patens EGF receptor-like protein (ELP) mRNA, partial cds Length = 1543 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||| ||||||||||||||||| || || || ||||| ||||||||||| Sbjct: 1035 tccaacggcatgtactgagccataatcgctcgaatctctgaatccatgta 986
>ref|NM_179623.1| Arabidopsis thaliana VSR-2; calcium ion binding / peptidase AT2G14720 (VSR-2) transcript variant AT2G14720.2 mRNA, complete cds Length = 2325 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1969 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1913 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 1804 cttgctgatgcaagtgtcatggtctctcatgta 1772
>ref|NM_127036.3| Arabidopsis thaliana VSR-2; calcium ion binding / peptidase AT2G14720 (VSR-2) transcript variant AT2G14720.1 mRNA, complete cds Length = 2371 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2015 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1959 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 1850 cttgctgatgcaagtgtcatggtctctcatgta 1818
>gb|BT008390.1| Arabidopsis thaliana At2g14720 gene, complete cds Length = 1887 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1848 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1792 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 1683 cttgctgatgcaagtgtcatggtctctcatgta 1651
>gb|AY062744.1| Arabidopsis thaliana putative vacuolar sorting receptor (At2g14720; F26C24.14) mRNA, complete cds Length = 2281 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 2015 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1959 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 1850 cttgctgatgcaagtgtcatggtctctcatgta 1818
>dbj|AK220910.1| Arabidopsis thaliana mRNA for putative vacuolar sorting receptor, complete cds, clone: RAFL22-47-H22 Length = 505 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 206 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 150 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 41 cttgctgatgcaagtgtcatggtctctcatgta 9
>gb|U79960.1|ATU79960 Arabidopsis thaliana vacuolar sorting receptor homolog mRNA, complete cds Length = 2290 Score = 50.1 bits (25), Expect = 0.010 Identities = 49/57 (85%) Strand = Plus / Minus Query: 290 ttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| ||||||||||| ||||| ||||| | |||||| || |||||||| Sbjct: 1986 ttggctgtccagtggcatgtactgtgccattatggctctgatctctgagtccatgta 1930 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 452 cttgctgatgcacgtgtcttgctctctcatgta 484 |||||||||||| ||||| || ||||||||||| Sbjct: 1821 cttgctgatgcaagtgtcatggtctctcatgta 1789
>ref|NM_195907.1| Oryza sativa (japonica cultivar-group) putative vacuolar sorting receptor protein (OSJNBb0078C13.14), mRNA Length = 1932 Score = 46.1 bits (23), Expect = 0.15 Identities = 65/79 (82%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagc 348 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 1891 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgtatg 1832 Query: 349 tccgtagcctgtatttgta 367 || ||| ||||||||||| Sbjct: 1831 accttagtctgtatttgta 1813
>ref|XM_416641.1| PREDICTED: Gallus gallus similar to Vitamin K-dependent protein S precursor (LOC418430), mRNA Length = 2814 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagct 598 ||||||||||||||||||||||| Sbjct: 821 cattcatcaatatcttcacagct 799
>emb|BX935313.2| Gallus gallus finished cDNA, clone ChEST959b13 Length = 995 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagct 598 ||||||||||||||||||||||| Sbjct: 779 cattcatcaatatcttcacagct 757
>ref|XM_413815.1| PREDICTED: Gallus gallus fibrillin 1 (Marfan syndrome) (FBN1), mRNA Length = 8973 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcacag 596 |||||||||||||||||||||| Sbjct: 5964 gcattcatcaatatcttcacag 5943
>ref|NM_000138.3| Homo sapiens fibrillin 1 (FBN1), mRNA Length = 11626 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1205 tgcattcatcaatatcttcaca 1184
>ref|NM_001974.3| Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 1 (EMR1), mRNA Length = 3150 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 714 tgcattcatcaatatcttcaca 693
>gb|AC130807.30| Medicago truncatula clone mth2-13o20, complete sequence Length = 143832 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1459 tgcattcatcaatatcttcaca 1480
>emb|X81479.1|HSEMR1 H.sapiens mRNA for EMR1 hormone receptor Length = 3149 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 714 tgcattcatcaatatcttcaca 693
>gb|AC091666.4| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0078C13, complete sequence Length = 140553 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Minus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 137625 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 137568
>gb|BC059395.1| Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 1, mRNA (cDNA clone MGC:71725 IMAGE:30349201), complete cds Length = 2966 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 719 tgcattcatcaatatcttcaca 698
>emb|CR931730.1| Medicago truncatula chromosome 5 clone mth2-17o15, COMPLETE SEQUENCE Length = 89342 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||||| ||||| || || |||||||| || | ||| || ||||||||||| Sbjct: 13723 cttggctgtccaagggcatatattgtgccatgattgctctgatttcagaatccatgta 13780
>emb|X63556.1|HSFIBRMR H.sapiens mRNA for fibrillin Length = 9940 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1272 tgcattcatcaatatcttcaca 1251
>dbj|AK131562.1| Homo sapiens cDNA FLJ16811 fis, clone THYMU3024602, highly similar to Cell surface glycoprotein EMR1 precursor Length = 3056 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 550 tgcattcatcaatatcttcaca 529
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 128809 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 128866
>gb|AC159236.2| Mus musculus BAC clone RP24-447C11 from chromosome 13, complete sequence Length = 160424 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 gaggaggcagcttgcttgctga 459 |||||||||||||||||||||| Sbjct: 12284 gaggaggcagcttgcttgctga 12305
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 9896330 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 9896387
>ref|NM_001001771.1| Sus scrofa fibrillin 1 (FBN1), mRNA Length = 9531 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1708 tgcattcatcaatatcttcaca 1687
>dbj|AB177803.1| Homo sapiens FBN1 gene for fibrillin 1, complete cds, isolate: Patient#6,9 Length = 9749 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1010 tgcattcatcaatatcttcaca 989
>dbj|AB177802.1| Homo sapiens FBN1 gene for fibrillin 1, complete cds, isolate: Patient#1 Length = 9749 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1010 tgcattcatcaatatcttcaca 989
>dbj|AB177801.1| Homo sapiens FBN1 gene for fibrillin 1, complete cds, isolate: Patient#3 Length = 9749 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1010 tgcattcatcaatatcttcaca 989
>gb|AF073800.1|AF073800 Sus scrofa fibrillin-1 precursor (FBN1) mRNA, complete cds Length = 9531 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1708 tgcattcatcaatatcttcaca 1687
>ref|NM_001038668.1| Canis familiaris egf-like module containing, mucin-like, hormone receptor-like 1 (EMR1), mRNA Length = 3622 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcacag 596 |||||||||||||||||||||| Sbjct: 1700 gcattcatcaatatcttcacag 1679
>gb|DQ227275.1| Canis familiaris EMR1 mRNA, complete cds Length = 3622 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcacag 596 |||||||||||||||||||||| Sbjct: 1700 gcattcatcaatatcttcacag 1679
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.59 Identities = 49/58 (84%) Strand = Plus / Plus Query: 289 cttggctgtccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 |||| ||||||| ||||||||||| |||||||| || | |||||| || |||||||| Sbjct: 9902369 cttgactgtccagtggcatgtactgtgccatgattgctctgatctcagagtccatgta 9902426
>emb|CT030646.6| Mouse DNA sequence from clone RP23-222A16 on chromosome 13, complete sequence Length = 195169 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 438 gaggaggcagcttgcttgctga 459 |||||||||||||||||||||| Sbjct: 180676 gaggaggcagcttgcttgctga 180697
>gb|L13923.1|HUMFIBRLLN Homo sapiens fibrillin mRNA, complete cds Length = 9662 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 574 tgcattcatcaatatcttcaca 595 |||||||||||||||||||||| Sbjct: 1010 tgcattcatcaatatcttcaca 989
>ref|NM_115145.1| Arabidopsis thaliana ATELP1 AT3G52850 (ATELP1) mRNA, complete cds Length = 2307 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 356 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2007 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1948 Query: 357 ctgtatttgtatactgcatat 377 ||||||||||| ||||||||| Sbjct: 1947 ctgtatttgtagactgcatat 1927
>gb|BC093617.1| Rattus norvegicus nel-like 2 homolog (chicken), mRNA (cDNA clone MGC:105410 IMAGE:7312010), complete cds Length = 3140 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1839 cattcatcaatatcttcacag 1819
>ref|XM_526999.1| PREDICTED: Pan troglodytes fibrillin 2 (congenital contractural arachnodactyly) (LOC471621), mRNA Length = 9933 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 5045 cagctgcattcgtagcttccc 5025
>ref|NM_031070.2| Rattus norvegicus nel-like 2 homolog (chicken) (Nell2), mRNA Length = 3196 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1895 cattcatcaatatcttcacag 1875
>ref|XM_359965.1| Magnaporthe grisea 70-15 hypothetical protein (MG05340.4) partial mRNA Length = 2253 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 315 gccatgatggcgcggatctccgaat 339 |||||| |||||||||||||||||| Sbjct: 588 gccatgctggcgcggatctccgaat 564
>ref|XM_419510.1| PREDICTED: Gallus gallus similar to latent transforming growth factor beta binding protein 1 LTBP-1L; TGF-beta1-BP-1 (LOC421461), mRNA Length = 5051 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 3251 gcattcatcaatatcttcaca 3231
>ref|XM_587714.2| PREDICTED: Bos taurus similar to latent transforming growth factor beta binding protein 1 isoform LTBP-1S (LOC510559), mRNA Length = 4858 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1284 cattcatcaatatcttcacag 1264
>ref|NM_019919.2| Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 1, mRNA Length = 6712 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 3705 gcattcatcaatatcttcaca 3685
>ref|NM_206958.1| Mus musculus latent transforming growth factor beta binding protein 1 (Ltbp1), transcript variant 2, mRNA Length = 5501 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 2494 gcattcatcaatatcttcaca 2474
>ref|NM_001999.3| Homo sapiens fibrillin 2 (congenital contractural arachnodactyly) (FBN2), mRNA Length = 10724 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 4242 cagctgcattcgtagcttccc 4222
>ref|XM_534090.2| PREDICTED: Canis familiaris similar to nel-like 1 precursor (LOC476888), mRNA Length = 2931 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1376 cattcatcaatatcttcacag 1356
>gb|AY062404.1| Arabidopsis thaliana cultivar LER RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5897 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5194 atttcgttttgcattcatcaa 5214
>gb|AY062403.1| Arabidopsis thaliana cultivar CVI RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5896 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5193 atttcgttttgcattcatcaa 5213
>gb|AY062402.1| Arabidopsis thaliana cultivar RF RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5894 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5191 atttcgttttgcattcatcaa 5211
>gb|AY062401.1| Arabidopsis thaliana cultivar UP RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5892 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5191 atttcgttttgcattcatcaa 5211
>gb|AY062400.1| Arabidopsis thaliana cultivar NFC RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5893 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5192 atttcgttttgcattcatcaa 5212
>gb|AY062399.1| Arabidopsis thaliana cultivar MT RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5897 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5196 atttcgttttgcattcatcaa 5216
>gb|AY062398.1| Arabidopsis thaliana cultivar KAS RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5898 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5197 atttcgttttgcattcatcaa 5217
>gb|AY062397.1| Arabidopsis thaliana cultivar HS RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5893 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5192 atttcgttttgcattcatcaa 5212
>gb|AY062396.1| Arabidopsis thaliana cultivar FM RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5892 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5191 atttcgttttgcattcatcaa 5211
>gb|AY062395.1| Arabidopsis thaliana cultivar AB RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5894 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5191 atttcgttttgcattcatcaa 5211
>gb|AY062394.1| Arabidopsis thaliana cultivar TSU RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5915 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5212 atttcgttttgcattcatcaa 5232
>gb|AY062393.1| Arabidopsis thaliana cultivar ZU RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5217 atttcgttttgcattcatcaa 5237
>gb|AY062392.1| Arabidopsis thaliana cultivar WU RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5217 atttcgttttgcattcatcaa 5237
>gb|AY062391.1| Arabidopsis thaliana cultivar TAMM RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5217 atttcgttttgcattcatcaa 5237
>gb|AY062390.1| Arabidopsis thaliana cultivar POG RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5916 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5213 atttcgttttgcattcatcaa 5233
>gb|AY062389.1| Arabidopsis thaliana cultivar LIP RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5879 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5176 atttcgttttgcattcatcaa 5196
>gb|AY062388.1| Arabidopsis thaliana cultivar KZ RFL1 pseudogene, complete sequence; and transaldolase-like protein gene, partial cds Length = 5895 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5192 atttcgttttgcattcatcaa 5212
>gb|AY062387.1| Arabidopsis thaliana cultivar CT RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5217 atttcgttttgcattcatcaa 5237
>gb|AY062386.1| Arabidopsis thaliana cultivar BUR RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5217 atttcgttttgcattcatcaa 5237
>gb|AY062385.1| Arabidopsis thaliana cultivar BLA RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5916 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5213 atttcgttttgcattcatcaa 5233
>gb|AY062384.1| Arabidopsis thaliana cultivar ANG RFL1 gene, complete cds; and transaldolase-like protein gene, partial cds Length = 5919 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 5216 atttcgttttgcattcatcaa 5236
>gb|AC123814.3| Mus musculus BAC clone RP24-235M22 from 10, complete sequence Length = 159486 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 ggcaaatacaagtccaaagaaaata 413 |||||||||||||||||| |||||| Sbjct: 75098 ggcaaatacaagtccaaataaaata 75074
>emb|Y07917.1|ATSPOT3PR A.thaliana mRNA for Spot 3 protein Length = 2305 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 356 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2001 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1942 Query: 357 ctgtatttgtatactgcatat 377 ||||||||||| ||||||||| Sbjct: 1941 ctgtatttgtagactgcatat 1921
>emb|CR611529.1| full-length cDNA clone CS0DI040YN23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1647 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 609 cagctgcattcgtagcttccc 589
>gb|AY089719.1| Rattus norvegicus neuron-specific epidermal growth factor-like repeat domain-containing protein mRNA, complete cds Length = 2618 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1895 cattcatcaatatcttcacag 1875
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 ccgacaaagggggacaatatc 82 ||||||||||||||||||||| Sbjct: 1392621 ccgacaaagggggacaatatc 1392601
>gb|AC025169.5| Homo sapiens chromosome 5 clone CTC-352M6, complete sequence Length = 161920 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 101901 cagctgcattcgtagcttccc 101921
>gb|AC010461.7| Homo sapiens chromosome 5 clone CTD-2275A5, complete sequence Length = 109588 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 75639 cagctgcattcgtagcttccc 75659
>dbj|AB179141.1| Macaca fascicularis testis cDNA clone: QtsA-13547, similar to human fibrillin 2 (congenital contractural arachnodactyly)(FBN2), mRNA, RefSeq: NM_001999.2 Length = 1884 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 591 cagctgcattcgtagcttccc 571
>dbj|AK036047.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630030D05 product:latent transforming growth factor beta binding protein 1, full insert sequence Length = 3114 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 2566 gcattcatcaatatcttcaca 2546
>gb|AY048289.1| Arabidopsis thaliana AT3g52850/F8J2_20 mRNA, complete cds Length = 2308 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 356 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2007 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1948 Query: 357 ctgtatttgtatactgcatat 377 ||||||||||| ||||||||| Sbjct: 1947 ctgtatttgtagactgcatat 1927
>gb|BC094612.1| Mus musculus latent transforming growth factor beta binding protein 1, mRNA (cDNA clone MGC:106419 IMAGE:30356631), complete cds Length = 5112 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 2515 gcattcatcaatatcttcaca 2495
>gb|AC022522.2|AC022522 Arabidopsis thaliana chromosome I BAC T28K15 genomic sequence, complete sequence Length = 88643 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 565 atttcgttttgcattcatcaa 585 ||||||||||||||||||||| Sbjct: 22613 atttcgttttgcattcatcaa 22593
>ref|XM_579504.1| PREDICTED: Rattus norvegicus nel-like 2 homolog (chicken) (Nell2), mRNA Length = 2583 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1895 cattcatcaatatcttcacag 1875
>ref|XM_312182.2| Anopheles gambiae str. PEST ENSANGP00000010271 (ENSANGG00000007782), partial mRNA Length = 5349 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1277 cattcatcaatatcttcacag 1257
>gb|U48245.1|RNU48245 Rattus norvegicus protein kinase C-binding protein NELL2 mRNA, complete cds Length = 2618 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacag 596 ||||||||||||||||||||| Sbjct: 1895 cattcatcaatatcttcacag 1875
>gb|DQ306781.1| Hevea brasiliensis isolate SSH52 mRNA sequence Length = 296 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 498 ctaccacagctgcattcgtagcttccccatgtatttt 534 |||||||||||||| || || || ||||||||||||| Sbjct: 12 ctaccacagctgcactcataactgccccatgtatttt 48
>gb|DQ306753.1| Hevea brasiliensis isolate SSH24 mRNA sequence Length = 296 Score = 42.1 bits (21), Expect = 2.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 498 ctaccacagctgcattcgtagcttccccatgtatttt 534 |||||||||||||| || || || ||||||||||||| Sbjct: 12 ctaccacagctgcactcataactgccccatgtatttt 48
>gb|AF022889.1|AF022889 Mus musculus latent TGF beta binding protein (LTBP-1) mRNA, complete cds Length = 6240 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 575 gcattcatcaatatcttcaca 595 ||||||||||||||||||||| Sbjct: 3673 gcattcatcaatatcttcaca 3653
>gb|U79959.1|ATU79959 Arabidopsis thaliana vacuolar sorting receptor homolog mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 356 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 2001 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1942 Query: 357 ctgtatttgtatactgcatat 377 ||||||||||| ||||||||| Sbjct: 1941 ctgtatttgtagactgcatat 1921
>gb|U86700.1|ATU86700 Arabidopsis thaliana EGF receptor like protein mRNA, complete cds Length = 2313 Score = 42.1 bits (21), Expect = 2.3 Identities = 66/81 (81%) Strand = Plus / Minus Query: 297 tccaaaggcatgtactgagccatgatggcgcggatctccgaatccatgtagctccgtagc 356 ||||| ||||||||||| |||||||| | | || |||| ||||||||| |||| | Sbjct: 1991 tccaatggcatgtactgtgccatgatccctctaatttccgcatccatgtaactcctgatt 1932 Query: 357 ctgtatttgtatactgcatat 377 ||||||||||| ||||||||| Sbjct: 1931 ctgtatttgtagactgcatat 1911
>dbj|AB209735.1| Homo sapiens mRNA for fibrillin 2 (congenital contractural arachnodactyly) variant protein Length = 6401 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 995 cagctgcattcgtagcttccc 975
>emb|X62009.1|HSFIB5 Homo sapiens partial mRNA for fibrillin 5 Length = 2823 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 1547 cagctgcattcgtagcttccc 1527
>gb|U03272.1|HSU03272 Human fibrillin-2 mRNA, complete cds Length = 10172 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttccc 524 ||||||||||||||||||||| Sbjct: 3800 cagctgcattcgtagcttccc 3780
>ref|NM_129047.2| Arabidopsis thaliana calcium ion binding / peptidase AT2G34940 mRNA, complete cds Length = 1986 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 572 tttgcattcatcaatatcttcaca 595 ||||||||||||||| |||||||| Sbjct: 1577 tttgcattcatcaatgtcttcaca 1554
>ref|XM_640152.1| Dictyostelium discoideum hypothetical protein (DDB0217004), partial mRNA Length = 4089 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2255 cattcatcaatatcttcaca 2236
>gb|AC118018.20| Mus musculus chromosome 17, clone RP23-458D20, complete sequence Length = 182043 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 397 caagtccaaagaaaataacccaca 420 |||||||||||||||||| ||||| Sbjct: 65332 caagtccaaagaaaataaaccaca 65309
>ref|NM_174053.1| Bos taurus fibrillin 1 (FBN1), mRNA Length = 8950 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 6064 cattcatcaatatcttcaca 6045
>ref|XM_515398.1| PREDICTED: Pan troglodytes LOC459143 (LOC459143), mRNA Length = 4446 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 3023 cattcatcaatatcttcaca 3004
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 cgccacatgctgttgctggt 279 |||||||||||||||||||| Sbjct: 6278710 cgccacatgctgttgctggt 6278729
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 gcgagcaggcagatattgtc 674 |||||||||||||||||||| Sbjct: 1257308 gcgagcaggcagatattgtc 1257289
>ref|NM_007993.1| Mus musculus fibrillin 1 (Fbn1), mRNA Length = 9830 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 2657 cattcatcaatgtcttcacaggttttta 2630
>gb|AC116963.2| Dictyostelium discoideum chromosome 2 map 4657875-4914984 strain AX4, complete sequence Length = 257109 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 61190 cattcatcaatatcttcaca 61209
>ref|XM_857825.1| PREDICTED: Canis familiaris similar to latent transforming growth factor beta binding protein 1 isoform LTBP-1S, transcript variant 2 (LOC475720), mRNA Length = 4246 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2765 cattcatcaatatcttcaca 2746 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2393 cattcatcaatatcttcaca 2374
>ref|XM_532928.2| PREDICTED: Canis familiaris similar to latent transforming growth factor beta binding protein 1 isoform LTBP-1S, transcript variant 1 (LOC475720), mRNA Length = 4246 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2768 cattcatcaatatcttcaca 2749 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2396 cattcatcaatatcttcaca 2377
>gb|AE014312.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 9 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacaagtccaaagaaaataa 414 |||||||||||||||||||| Sbjct: 81819 tacaagtccaaagaaaataa 81838
>gb|BC051464.1| Homo sapiens cDNA clone IMAGE:4824495, **** WARNING: chimeric clone **** Length = 3659 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 1350 cattcatcaatatcttcaca 1331
>gb|BC038107.1| Homo sapiens cDNA clone IMAGE:5267953, **** WARNING: chimeric clone **** Length = 3642 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 1358 cattcatcaatatcttcaca 1339
>emb|AL138954.16| Human DNA sequence from clone RP11-100K21 on chromosome 13q33.1-33.3, complete sequence Length = 144152 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tacaagtccaaagaaaataa 414 |||||||||||||||||||| Sbjct: 42786 tacaagtccaaagaaaataa 42805
>emb|AL137850.12| Human DNA sequence from clone RP11-56P10 on chromosome 9q31.3-33.3 Contains the 3' end of the gene for a novel C2H2 type zinc finger protein, the AMBP gene for alpha-1-microglobulin/bikunin precursor, the gene for a novel protein similar to mouse kinesin 12 (LOC113220) and two CpG islands, complete sequence Length = 125842 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 tgtcttgctctctcatgtat 485 |||||||||||||||||||| Sbjct: 71778 tgtcttgctctctcatgtat 71759
>gb|AC160146.10| Mus musculus 10 BAC RP24-421I12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167510 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aacaccaagtatttacagga 27 |||||||||||||||||||| Sbjct: 11921 aacaccaagtatttacagga 11940
>gb|AC015923.8| Homo sapiens chromosome 17, clone CTD-2301B9, complete sequence Length = 109774 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 tacaagtccaaagaaaataaccca 418 ||||| |||||||||||||||||| Sbjct: 54004 tacaaatccaaagaaaataaccca 54027
>ref|NM_206943.1| Homo sapiens latent transforming growth factor beta binding protein 1 (LTBP1), transcript variant 1, mRNA Length = 6148 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 3746 cattcatcaatatcttcaca 3727
>ref|NM_000627.2| Homo sapiens latent transforming growth factor beta binding protein 1 (LTBP1), transcript variant 2, mRNA Length = 5298 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2896 cattcatcaatatcttcaca 2877
>gb|AF489528.1| Homo sapiens transforming growth factor-beta binding protein-1S (LTBP1) mRNA, complete cds, alternatively spliced Length = 4185 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2762 cattcatcaatatcttcaca 2743
>gb|AC008885.5| Homo sapiens chromosome 5 clone CTD-2218K11, complete sequence Length = 127790 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gaggaggcagcttgcttgct 457 |||||||||||||||||||| Sbjct: 12858 gaggaggcagcttgcttgct 12839
>gb|AC108174.1| Homo sapiens chromosome 5 clone RP11-78C3, complete sequence Length = 162435 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 gaggaggcagcttgcttgct 457 |||||||||||||||||||| Sbjct: 57873 gaggaggcagcttgcttgct 57892
>gb|AC021872.22| Homo sapiens 12 BAC RP11-253F9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164020 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 tacaagtccaaagaaaataaccca 418 ||||| |||||||||||||||||| Sbjct: 65130 tacaaatccaaagaaaataaccca 65107
>gb|AC016623.6| Homo sapiens chromosome 5 clone CTD-2345N17, complete sequence Length = 153823 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ctgcagccattgcactgaca 559 |||||||||||||||||||| Sbjct: 33289 ctgcagccattgcactgaca 33308
>gb|AC156386.7| Mus musculus chromosome 3, clone RP23-224L6, complete sequence Length = 167771 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 615 ttgaaaccttgtggacatttgcag 638 ||||| |||||||||||||||||| Sbjct: 44096 ttgaatccttgtggacatttgcag 44119
>gb|AF051400.1|AF051400 Gallus gallus fibulin-1, isoform C precursor (FBLN1) mRNA, complete cds Length = 2358 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 1667 cattcatcaatatcttcaca 1648
>gb|AF051399.1|AF051399 Gallus gallus fibulin-1, isoform D precursor (FBLN1) mRNA, complete cds Length = 3346 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 1667 cattcatcaatatcttcaca 1648
>ref|NM_031826.1| Rattus norvegicus fibrillin 2 (Fbn2), mRNA Length = 8756 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttcc 523 |||||||||||||||||||| Sbjct: 3779 cagctgcattcgtagcttcc 3760
>gb|AC073536.5| Homo sapiens chromosome 5 clone CTD-2068E4, complete sequence Length = 116993 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 ctgcagccattgcactgaca 559 |||||||||||||||||||| Sbjct: 30344 ctgcagccattgcactgaca 30363
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 acatttgcagccttcagattcttc 652 |||||| ||||||||||||||||| Sbjct: 28645 acattttcagccttcagattcttc 28668
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 572 tttgcattcatcaatatcttcaca 595 ||||||||||||||||||| |||| Sbjct: 17857792 tttgcattcatcaatatctacaca 17857815
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 27056770 ggcatgtactgggacatgatggccatgatctccgagtccatgta 27056727
>ref|NM_204165.1| Gallus gallus fibulin 1 (FBLN1), mRNA Length = 3346 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 1667 cattcatcaatatcttcaca 1648
>gb|AC128708.8| Homo sapiens 12 BAC RP11-714L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102748 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 tgcacgtgtcttgctctctcatgt 483 ||||||||||||||| |||||||| Sbjct: 64250 tgcacgtgtcttgctttctcatgt 64227
>gb|BT004565.1| Arabidopsis thaliana At2g34940 gene, complete cds Length = 1857 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 572 tttgcattcatcaatatcttcaca 595 ||||||||||||||| |||||||| Sbjct: 1551 tttgcattcatcaatgtcttcaca 1528
>dbj|AP003628.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0473H04 Length = 155204 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 25580 ggcatgtactgggacatgatggccatgatctccgagtccatgta 25537
>dbj|AK100655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111G13, full insert sequence Length = 2663 Score = 40.1 bits (20), Expect = 9.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 303 ggcatgtactgagccatgatggcgcggatctccgaatccatgta 346 ||||||||||| | ||||||||| ||||||||| |||||||| Sbjct: 2194 ggcatgtactgggacatgatggccatgatctccgagtccatgta 2151
>gb|AF135060.1|AF135060 Rattus norvegicus fibrillin-2 mRNA, complete cds Length = 8756 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 cagctgcattcgtagcttcc 523 |||||||||||||||||||| Sbjct: 3779 cagctgcattcgtagcttcc 3760
>emb|AL928866.7| Zebrafish DNA sequence from clone DKEY-11E23 in linkage group 20, complete sequence Length = 249759 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 cacaaaatgaaggtgcacaa 124 |||||||||||||||||||| Sbjct: 96215 cacaaaatgaaggtgcacaa 96234
>emb|X54816.1|HSA1MBG1 Homo sapiens gene for alpha-1-microglobulin-bikunin, exons 1-5 (encoding alpha-1-microglobulin, N-terminus.) Length = 7656 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 466 tgtcttgctctctcatgtat 485 |||||||||||||||||||| Sbjct: 4264 tgtcttgctctctcatgtat 4283
>ref|NM_001038666.1| Canis familiaris egf-like module containing, mucin-like, hormone receptor-like 3 (EMR3), mRNA Length = 2506 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 285 cattcatcaatatcttcaca 266
>gb|DQ227277.1| Canis familiaris EMR3 mRNA, complete cds Length = 2506 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 285 cattcatcaatatcttcaca 266
>dbj|AB081457.1| Urechis unicinctus gene for Uru-TK receptor, complete cds Length = 5099 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 cgcgtacaaattgtatcttt 179 |||||||||||||||||||| Sbjct: 597 cgcgtacaaattgtatcttt 616
>gb|AF007248.1|AF007248 Mus musculus mutant fibrillin-1 (Fbn1) mRNA, complete cds Length = 11724 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 5390 cattcatcaatgtcttcacaggttttta 5363 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 2438 cattcatcaatgtcttcacaggttttta 2411
>dbj|AK116277.1| Ciona intestinalis cDNA, clone:citb029g14, full insert sequence Length = 1316 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 agcttgcttgctgatgcacg 465 |||||||||||||||||||| Sbjct: 217 agcttgcttgctgatgcacg 198
>gb|DQ310185.1| Canis familiaris latent transforming growth factor binding protein-1 mRNA, partial cds Length = 176 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 155 cattcatcaatatcttcaca 136
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151119 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 acatttgcagccttcagattcttc 652 |||||| ||||||||||||||||| Sbjct: 141580 acattttcagccttcagattcttc 141603
>emb|AL731587.2|OSJN00230 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016N04, complete sequence Length = 164645 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 572 tttgcattcatcaatatcttcaca 595 ||||||||||||||||||| |||| Sbjct: 54547 tttgcattcatcaatatctacaca 54570
>emb|CT476830.1| Human DNA sequence from clone SC22CB-20A11 on chromosome 22, complete sequence Length = 37621 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 543 cagccattgcactgacaggcagat 566 |||||| ||||||||||||||||| Sbjct: 26887 cagccactgcactgacaggcagat 26910
>gb|AC135019.3| Mus musculus BAC clone RP23-186D15 from 10, complete sequence Length = 189457 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aacaccaagtatttacagga 27 |||||||||||||||||||| Sbjct: 139911 aacaccaagtatttacagga 139930
>gb|AC141560.4| Mus musculus BAC clone RP23-425A5 from 12, complete sequence Length = 196665 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 ctgtatttgtatactgcata 376 |||||||||||||||||||| Sbjct: 87009 ctgtatttgtatactgcata 87028
>dbj|AB208801.1| Homo sapiens mRNA for latent transforming growth factor beta binding protein 1 isoform LTBP-1S variant protein Length = 4940 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2705 cattcatcaatatcttcaca 2686
>gb|L28748.1|BOVXAAAA Bos taurus mRNA, complete cds Length = 8950 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 6064 cattcatcaatatcttcaca 6045
>gb|U22493.1|MMU22493 Mus musculus fibrillin-1 (Fbn1) mRNA, complete cds Length = 9830 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 2657 cattcatcaatgtcttcacaggttttta 2630
>gb|U19972.1|MMU19972 Mus musculus fibrillin-1 mRNA, partial cds Length = 3287 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 2364 cattcatcaatgtcttcacaggttttta 2337
>gb|M34057.1|HUMTGFB1B Human transforming growth factor-beta 1 binding protein mRNA, complete cds Length = 5075 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcaca 595 |||||||||||||||||||| Sbjct: 2852 cattcatcaatatcttcaca 2833
>gb|L29454.1|MUSFBN1A Mouse fibrillin (Fbn-1) mRNA, complete cds Length = 11953 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 576 cattcatcaatatcttcacagcttttta 603 ||||||||||| ||||||||| |||||| Sbjct: 4811 cattcatcaatgtcttcacaggttttta 4784
>dbj|AB066244.1| Mus musculus Col11a1 genes for a1(XI) collagen, complete cds Length = 7365 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 615 ttgaaaccttgtggacatttgcag 638 ||||| |||||||||||||||||| Sbjct: 6657 ttgaatccttgtggacatttgcag 6680 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,027,034 Number of Sequences: 3902068 Number of extensions: 6027034 Number of successful extensions: 100419 Number of sequences better than 10.0: 183 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 5 Number of HSP's that attempted gapping in prelim test: 99421 Number of HSP's gapped (non-prelim): 991 length of query: 678 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 655 effective length of database: 17,143,297,704 effective search space: 11228859996120 effective search space used: 11228859996120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)