ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19c19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | EF2_BETVU (O23755) Elongation factor 2 (EF-2) | 51 | 7e-07 | 2 | EF2_CHLKE (P28996) Elongation factor 2 (EF-2) | 39 | 0.005 | 3 | EF2_CRIGR (P09445) Elongation factor 2 (EF-2) | 32 | 0.56 | 4 | EF2_RAT (P05197) Elongation factor 2 (EF-2) | 31 | 0.73 | 5 | EF2_PONPY (Q5R8Z3) Elongation factor 2 (EF-2) | 31 | 0.73 | 6 | EF2_MOUSE (P58252) Elongation factor 2 (EF-2) | 31 | 0.73 | 7 | EF2_MESAU (P05086) Elongation factor 2 (EF-2) | 31 | 0.73 | 8 | EF2_HUMAN (P13639) Elongation factor 2 (EF-2) | 31 | 0.73 | 9 | EF2_CHICK (Q90705) Elongation factor 2 (EF-2) | 31 | 0.73 | 10 | EF2_BOVIN (Q3SYU2) Elongation factor 2 (EF-2) | 31 | 0.73 | 11 | EF2_DROME (P13060) Elongation factor 2 (EF-2) | 30 | 1.3 | 12 | EF2_SCHPO (O14460) Elongation factor 2 (EF-2) | 29 | 3.6 | 13 | EF2_ENTHI (Q06193) Elongation factor 2 (EF-2) | 28 | 4.8 | 14 | EF2_CAEEL (P29691) Elongation factor 2 (EF-2) | 28 | 6.2 | 15 | EF2_HALMA (Q5UZS7) Elongation factor 2 (EF-2) | 28 | 6.2 | 16 | EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperat... | 28 | 8.1 | 17 | EF2_CRYPV (Q23716) Elongation factor 2 (EF-2) | 28 | 8.1 |
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>EF2_BETVU (O23755) Elongation factor 2 (EF-2)| Length = 843 Score = 51.2 bits (121), Expect = 7e-07 Identities = 24/29 (82%), Positives = 28/29 (96%) Frame = -3 Query: 255 QSATLVTEIRKRKGLKEQMTPLSDFEDKL 169 Q++TLV+ IRKRKGLKEQMTPLS+FEDKL Sbjct: 815 QASTLVSVIRKRKGLKEQMTPLSEFEDKL 843
>EF2_CHLKE (P28996) Elongation factor 2 (EF-2)| Length = 845 Score = 38.5 bits (88), Expect = 0.005 Identities = 18/29 (62%), Positives = 23/29 (79%) Frame = -3 Query: 255 QSATLVTEIRKRKGLKEQMTPLSDFEDKL 169 Q+ TLV +IRKRKGLK + LS++EDKL Sbjct: 817 QANTLVMDIRKRKGLKPEPAALSEYEDKL 845
>EF2_CRIGR (P09445) Elongation factor 2 (EF-2)| Length = 857 Score = 31.6 bits (70), Expect = 0.56 Identities = 15/29 (51%), Positives = 20/29 (68%) Frame = -3 Query: 255 QSATLVTEIRKRKGLKEQMTPLSDFEDKL 169 + + +V E RKRKGLKE + L +F DKL Sbjct: 829 RGSQVVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_RAT (P05197) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_PONPY (Q5R8Z3) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_MOUSE (P58252) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_MESAU (P05086) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_HUMAN (P13639) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_CHICK (Q90705) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_BOVIN (Q3SYU2) Elongation factor 2 (EF-2)| Length = 857 Score = 31.2 bits (69), Expect = 0.73 Identities = 15/25 (60%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + L +F DKL Sbjct: 833 VVAETRKRKGLKEGIPALDNFLDKL 857
>EF2_DROME (P13060) Elongation factor 2 (EF-2)| Length = 843 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V + RKRKGLKE + LS + DKL Sbjct: 819 IVQDTRKRKGLKEGLPDLSQYLDKL 843
>EF2_SCHPO (O14460) Elongation factor 2 (EF-2)| Length = 842 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E RKRKGLKE + +++ D+L Sbjct: 818 IVCEARKRKGLKENVPDYTEYYDRL 842
>EF2_ENTHI (Q06193) Elongation factor 2 (EF-2)| Length = 840 Score = 28.5 bits (62), Expect = 4.8 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -3 Query: 246 TLVTEIRKRKGLKEQMTPLSDFEDKL 169 ++V IRKRKGL E + L F DKL Sbjct: 815 SIVAAIRKRKGLPEGVPGLDKFYDKL 840
>EF2_CAEEL (P29691) Elongation factor 2 (EF-2)| Length = 851 Score = 28.1 bits (61), Expect = 6.2 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V + RKRKGLKE + L ++ DK+ Sbjct: 827 IVLDTRKRKGLKEGVPALDNYLDKM 851
>EF2_HALMA (Q5UZS7) Elongation factor 2 (EF-2)| Length = 728 Score = 28.1 bits (61), Expect = 6.2 Identities = 9/20 (45%), Positives = 17/20 (85%) Frame = -3 Query: 240 VTEIRKRKGLKEQMTPLSDF 181 ++EIR+RKG+K+++ P D+ Sbjct: 708 ISEIRERKGMKQELNPAIDY 727
>EF2_NEUCR (Q96X45) Elongation factor 2 (EF-2) (Colonial temperature-sensitive| 3) Length = 844 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 +V E+RKRKGLK ++ ++ DKL Sbjct: 820 IVQEMRKRKGLKVEVPGYENYYDKL 844
>EF2_CRYPV (Q23716) Elongation factor 2 (EF-2)| Length = 832 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/25 (48%), Positives = 18/25 (72%) Frame = -3 Query: 243 LVTEIRKRKGLKEQMTPLSDFEDKL 169 LV IR+RK +KE++ L ++ DKL Sbjct: 808 LVKAIRRRKNIKEEIPALDNYLDKL 832 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,632,838 Number of Sequences: 219361 Number of extensions: 446720 Number of successful extensions: 1457 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1428 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1457 length of database: 80,573,946 effective HSP length: 61 effective length of database: 67,192,925 effective search space used: 1612630200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
