ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19c19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF475129.1| Triticum aestivum elongation factor mRNA, partial... 163 3e-37
2ref|XM_471058.1| Oryza sativa (japonica cultivar-group), predic... 88 2e-14
3gb|BT016828.1| Zea mays clone Contig661 mRNA sequence 88 2e-14
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
5dbj|AK103035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
6dbj|AK101405.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
7dbj|AK101166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
8dbj|AK062196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
9gb|AY111939.1| Zea mays CL2727_2 mRNA sequence 88 2e-14
10emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 88 2e-14
11ref|XM_465992.1| Oryza sativa (japonica cultivar-group), mRNA 72 9e-10
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 9e-10
13dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic D... 72 9e-10
14dbj|AK121453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
15dbj|AK100313.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
16dbj|AK099493.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
17dbj|AK068869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
18dbj|AK060953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 9e-10
19gb|BT016459.1| Zea mays clone Contig292 mRNA sequence 64 2e-07
20gb|AY103807.1| Zea mays PCO130571 mRNA sequence 64 2e-07
21gb|BT012802.1| Lycopersicon esculentum clone 113818R, mRNA sequence 60 4e-06
22gb|M68064.1|CHLEF2 Chlorella kessleri elongation factor 2 mRNA, ... 56 6e-05
23ref|XM_957193.1| Neurospora crassa OR74A ELONGATION FACTOR 2 (EF... 50 0.003
24ref|XM_328405.1| Neurospora crassa OR74A ELONGATION FACTOR 2 (EF... 50 0.003
25gb|AF258620.1| Neurospora crassa elongation factor 2 gene, compl... 50 0.003
26gb|DQ086199.1| Ictalurus punctatus eukaryotic translation elonga... 48 0.014
27emb|BX026417.1|CNS08SJP Single read from an extremity of a full-... 46 0.054
28emb|BX026416.1|CNS08SJO Single read from an extremity of a full-... 46 0.054
29emb|BX014311.1|CNS08J7F Single read from an extremity of a full-... 46 0.054
30emb|BX014310.1|CNS08J7E Single read from an extremity of a full-... 46 0.054
31dbj|AB226161.1| Aspergillus oryzae cDNA, contig sequence: AoEST3019 44 0.21
32dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 44 0.21
33dbj|AK110167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.21
34ref|XM_750593.1| Aspergillus fumigatus Af293 translation elongat... 42 0.84
35gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Can... 40 3.3
36emb|CR938729.13| Mouse DNA sequence from clone DN-164L21 on chro... 40 3.3
37gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, com... 40 3.3
38emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in ... 40 3.3
39emb|CR859604.1| Pongo pygmaeus mRNA; cDNA DKFZp468K065 (from clo... 40 3.3
40emb|CR858745.1| Pongo pygmaeus mRNA; cDNA DKFZp468M076 (from clo... 40 3.3
41gb|AC026003.10| Homo sapiens chromosome 18, clone RP11-715P20, c... 40 3.3
42emb|BX830691.1|CNS09ZGD Arabidopsis thaliana Full-length cDNA Co... 40 3.3
43emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, co... 40 3.3
44emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chr... 40 3.3
45emb|AL671987.12| Mouse DNA sequence from clone RP23-246L17 on ch... 40 3.3 
>gb|AF475129.1| Triticum aestivum elongation factor mRNA, partial cds
          Length = 504

 Score =  163 bits (82), Expect = 3e-37
 Identities = 88/90 (97%)
 Strand = Plus / Minus

                                                                       
Query: 168 agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 502 agagcttgtcctcgaaatcagatagaggggtcatctgttccttcagacccttgcgcttgc 443

                                         
Query: 228 ggatctccgtgacaagggtggcagactggg 257
           ||||||||||||||||||| ||||||||||
Sbjct: 442 ggatctccgtgacaagggtcgcagactggg 413
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>ref|XM_471058.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2532

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 2530 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 2471

                
Query: 228  ggat 231
            ||||
Sbjct: 2470 ggat 2467
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>gb|BT016828.1| Zea mays clone Contig661 mRNA sequence
          Length = 2410

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||||
Sbjct: 2016 agagcttgtcctcaaactcagaaagaggggtcatctgttccttgagacccttcctcttgc 1957

                
Query: 228  ggat 231
            ||||
Sbjct: 1956 ggat 1953
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                           
Query: 168     agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
               ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 1085475 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 1085416

                   
Query: 228     ggat 231
               ||||
Sbjct: 1085415 ggat 1085412
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>dbj|AK103035.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117D12, full
            insert sequence
          Length = 2038

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 1802 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 1743

                
Query: 228  ggat 231
            ||||
Sbjct: 1742 ggat 1739
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>dbj|AK101405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037G17, full
            insert sequence
          Length = 3104

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 2845 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 2786

                
Query: 228  ggat 231
            ||||
Sbjct: 2785 ggat 2782
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>dbj|AK101166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028E07, full
            insert sequence
          Length = 3081

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 2845 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 2786

                
Query: 228  ggat 231
            ||||
Sbjct: 2785 ggat 2782
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>dbj|AK062196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F12, full
            insert sequence
          Length = 1398

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 1164 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 1105

                
Query: 228  ggat 231
            ||||
Sbjct: 1104 ggat 1101
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>gb|AY111939.1| Zea mays CL2727_2 mRNA sequence
          Length = 752

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                       
Query: 168 agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
           ||||||||||||| || ||||| ||||||||||||||||||||||||||||| | |||||
Sbjct: 314 agagcttgtcctcaaactcagaaagaggggtcatctgttccttgagacccttcctcttgc 373

               
Query: 228 ggat 231
           ||||
Sbjct: 374 ggat 377
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>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 168   agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
             ||||||||||||||||||| || |||||||||||||| |||||||||||||| | |||||
Sbjct: 27844 agagcttgtcctcgaaatccgagagaggggtcatctgctccttgagacccttcctcttgc 27785

                 
Query: 228   ggat 231
             ||||
Sbjct: 27784 ggat 27781
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>ref|XM_465992.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2924

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 2689 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 2630

                
Query: 228  ggat 231
            ||||
Sbjct: 2629 ggat 2626
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                            
Query: 168      agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
                ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 18940943 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 18940884

                    
Query: 228      ggat 231
                ||||
Sbjct: 18940883 ggat 18940880
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>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461D06
          Length = 112895

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                          
Query: 168    agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
              ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 104476 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 104417

                  
Query: 228    ggat 231
              ||||
Sbjct: 104416 ggat 104413
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>dbj|AK121453.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023142O06, full
            insert sequence
          Length = 1947

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 1719 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 1660

                
Query: 228  ggat 231
            ||||
Sbjct: 1659 ggat 1656
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>dbj|AK100313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078M04, full
            insert sequence
          Length = 2923

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 2688 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 2629

                
Query: 228  ggat 231
            ||||
Sbjct: 2628 ggat 2625
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>dbj|AK099493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027E04, full
           insert sequence
          Length = 916

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 168 agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
           ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 688 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 629

               
Query: 228 ggat 231
           ||||
Sbjct: 628 ggat 625
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>dbj|AK068869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002E06, full
            insert sequence
          Length = 1301

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 1068 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 1009

                
Query: 228  ggat 231
            ||||
Sbjct: 1008 ggat 1005
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>dbj|AK060953.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G04, full
           insert sequence
          Length = 1171

 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 57/64 (89%)
 Strand = Plus / Minus

                                                                       
Query: 168 agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
           ||||||||||||||||||| || || || |||||||| |||||||||||||| | |||||
Sbjct: 938 agagcttgtcctcgaaatcggagaggggagtcatctgctccttgagacccttcctcttgc 879

               
Query: 228 ggat 231
           ||||
Sbjct: 878 ggat 875
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>gb|BT016459.1| Zea mays clone Contig292 mRNA sequence
          Length = 844

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 168 agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
           ||||||||||||| || ||||| ||||| ||||||||||| || |||||||| | |||||
Sbjct: 654 agagcttgtcctcaaactcagaaagaggagtcatctgttctttcagacccttcctcttgc 595

               
Query: 228 ggat 231
           ||||
Sbjct: 594 ggat 591
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>gb|AY103807.1| Zea mays PCO130571 mRNA sequence
          Length = 2964

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                        
Query: 168  agagcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgc 227
            ||||||||||||| || ||||| ||||| ||||||||||| || |||||||| | |||||
Sbjct: 2679 agagcttgtcctcaaactcagaaagaggagtcatctgttctttcagacccttcctcttgc 2620

                
Query: 228  ggat 231
            ||||
Sbjct: 2619 ggat 2616
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>gb|BT012802.1| Lycopersicon esculentum clone 113818R, mRNA sequence
          Length = 2816

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                        
Query: 170  agcttgtcctcgaaatcagatagaggggtcatctgttccttgagacccttgcgcttgcgg 229
            ||||||||||| || || ||||||||||||||||| ||||| | |||||| | |||||||
Sbjct: 2600 agcttgtcctcaaactcggatagaggggtcatctgatccttcaaacccttcctcttgcgg 2541

              
Query: 230  at 231
            ||
Sbjct: 2540 at 2539
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>gb|M68064.1|CHLEF2 Chlorella kessleri elongation factor 2 mRNA, complete cds
          Length = 2931

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 208  cttgagacccttgcgcttgcggatctccgtgacaagggtg 247
            |||||||||||||||||||||||| ||| |||| ||||||
Sbjct: 2595 cttgagacccttgcgcttgcggatgtccatgaccagggtg 2556
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>ref|XM_957193.1| Neurospora crassa OR74A ELONGATION FACTOR 2 (EF-2) (NCU07700.1)
            partial mRNA
          Length = 2535

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 207  ccttgagacccttgcgcttgcggatctcc 235
            |||||||||||||||||||||| ||||||
Sbjct: 2494 ccttgagacccttgcgcttgcgcatctcc 2466
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>ref|XM_328405.1| Neurospora crassa OR74A ELONGATION FACTOR 2 (EF-2) (NCU07700.1)
            partial mRNA
          Length = 2535

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 207  ccttgagacccttgcgcttgcggatctcc 235
            |||||||||||||||||||||| ||||||
Sbjct: 2494 ccttgagacccttgcgcttgcgcatctcc 2466
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>gb|AF258620.1| Neurospora crassa elongation factor 2 gene, complete cds
          Length = 3395

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 207  ccttgagacccttgcgcttgcggatctcc 235
            |||||||||||||||||||||| ||||||
Sbjct: 3093 ccttgagacccttgcgcttgcgcatctcc 3065
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>gb|DQ086199.1| Ictalurus punctatus eukaryotic translation elongation factor 2
           mRNA, partial cds
          Length = 498

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 205 ttccttgagacccttgcgcttgcg 228
           ||||||||||||||||||||||||
Sbjct: 459 ttccttgagacccttgcgcttgcg 436
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>emb|BX026417.1|CNS08SJP Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA4CG06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 959

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 205 ttccttgagacccttgcgcttgcggat 231
           |||||| ||||||||||||||||||||
Sbjct: 625 ttccttcagacccttgcgcttgcggat 651
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>emb|BX026416.1|CNS08SJO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA4CG06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1010

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 205 ttccttgagacccttgcgcttgcggat 231
           |||||| ||||||||||||||||||||
Sbjct: 424 ttccttcagacccttgcgcttgcggat 398
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>emb|BX014311.1|CNS08J7F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA21CA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 954

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 205 ttccttgagacccttgcgcttgcggat 231
           |||||| ||||||||||||||||||||
Sbjct: 639 ttccttcagacccttgcgcttgcggat 665
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>emb|BX014310.1|CNS08J7E Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA21CA08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 859

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 205 ttccttgagacccttgcgcttgcggat 231
           |||||| ||||||||||||||||||||
Sbjct: 442 ttccttcagacccttgcgcttgcggat 416
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>dbj|AB226161.1| Aspergillus oryzae cDNA, contig sequence: AoEST3019
          Length = 1949

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 205  ttccttgagacccttgcgcttgcggatctc 234
            ||||||||||||||||||||| || |||||
Sbjct: 1669 ttccttgagacccttgcgcttacgcatctc 1640
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 205    ttccttgagacccttgcgcttgcggatctc 234
              ||||||||||||||||||||| || |||||
Sbjct: 741941 ttccttgagacccttgcgcttacgcatctc 741970
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>dbj|AK110167.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-F12, full
            insert sequence
          Length = 2770

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 206  tccttgagacccttgcgcttgcggat 231
            ||||| ||||||||||||||||||||
Sbjct: 2552 tccttaagacccttgcgcttgcggat 2527
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>ref|XM_750593.1| Aspergillus fumigatus Af293 translation elongation factor EF-2
            subunit (Afu2g13530) partial mRNA
          Length = 2520

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 206  tccttgagacccttgcgcttgcggatctc 234
            |||||||||||||||||||| || |||||
Sbjct: 2480 tccttgagacccttgcgcttacgcatctc 2452
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>gb|AC153376.10| Mus musculus 6 BAC RP23-210L10 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203455

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   aaagcaaactagaccatgta 151
             ||||||||||||||||||||
Sbjct: 97773 aaagcaaactagaccatgta 97754
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>emb|CR938729.13| Mouse DNA sequence from clone DN-164L21 on chromosome 3, complete
            sequence
          Length = 133279

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  gtaacagaatcagaagttca 168
            ||||||||||||||||||||
Sbjct: 3309 gtaacagaatcagaagttca 3290
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>gb|AC115917.10| Mus musculus chromosome 1, clone RP24-488H6, complete sequence
          Length = 186588

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    agcagcataaagcaaactag 143
              ||||||||||||||||||||
Sbjct: 159906 agcagcataaagcaaactag 159925
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>emb|CR812469.6| Zebrafish DNA sequence from clone DKEY-286F3 in linkage group 5,
             complete sequence
          Length = 162086

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    atcgagagacatcaaaacaa 41
             ||||||||||||||||||||
Sbjct: 31320 atcgagagacatcaaaacaa 31339
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>emb|CR859604.1| Pongo pygmaeus mRNA; cDNA DKFZp468K065 (from clone DKFZp468K065)
          Length = 3165

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 205  ttccttgagacccttgcgcttgcggatctccg 236
            |||||| || ||||||||||||||| ||||||
Sbjct: 2620 ttccttcaggcccttgcgcttgcgggtctccg 2589
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>emb|CR858745.1| Pongo pygmaeus mRNA; cDNA DKFZp468M076 (from clone DKFZp468M076)
          Length = 3177

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 205  ttccttgagacccttgcgcttgcggatctccg 236
            |||||| || ||||||||||||||| ||||||
Sbjct: 2621 ttccttcaggcccttgcgcttgcgggtctccg 2590
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>gb|AC026003.10| Homo sapiens chromosome 18, clone RP11-715P20, complete sequence
          Length = 178733

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     gataggacattgcaatagca 79
              ||||||||||||||||||||
Sbjct: 104352 gataggacattgcaatagca 104371
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>emb|BX830691.1|CNS09ZGD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS14ZF01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1303

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 113 gcagctctcttagcagcataaagc 136
           ||||||||||||||||||| ||||
Sbjct: 177 gcagctctcttagcagcatcaagc 154
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>emb|BX322606.6| Zebrafish DNA sequence from clone DKEY-40F12, complete sequence
          Length = 240928

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     catcgagagacatcaaaaca 40
              ||||||||||||||||||||
Sbjct: 138102 catcgagagacatcaaaaca 138121
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>emb|AL365317.22| Mouse DNA sequence from clone RP23-179K8 on chromosome 1, complete
              sequence
          Length = 187131

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    agcagcataaagcaaactag 143
              ||||||||||||||||||||
Sbjct: 111788 agcagcataaagcaaactag 111769
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>emb|AL671987.12| Mouse DNA sequence from clone RP23-246L17 on chromosome 3, complete
             sequence
          Length = 183333

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 149   gtaacagaatcagaagttca 168
             ||||||||||||||||||||
Sbjct: 17500 gtaacagaatcagaagttca 17481


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,972,970
Number of Sequences: 3902068
Number of extensions: 1972970
Number of successful extensions: 36065
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35969
Number of HSP's gapped (non-prelim): 96
length of query: 257
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 235
effective length of database: 17,147,199,772
effective search space: 4029591946420
effective search space used: 4029591946420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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