ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF467539.1| Hordeum vulgare putative aldehyde dehydrogenase BIS1 (bis1) mRNA, complete cds Length = 1992 Score = 1320 bits (666), Expect = 0.0 Identities = 680/682 (99%), Gaps = 2/682 (0%) Strand = Plus / Minus Query: 1 ttcttttactagtagtaacatctaaagctccattaacaaccctcgtggtactccattcat 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1962 ttcttttactag-agtaacatctaaagctccattaacaaccctcgtggtactccattcat 1904 Query: 61 aattatgacctttactttgttcttgggagtcgagattctcccaattgcctacacggggct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1903 aattatgacctttactttgttcttgggagtcgagattctcccaattgcctacacggggct 1844 Query: 121 tccattattcaacacaacacggtaccagtcctcgaccagctaattcggtccgtgtagcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1843 tccattattcaacacaacacggtaccagtcctcgaccagctaattcggtccgtgtagcct 1784 Query: 181 tcttctccatcaacagcgtgttcttctagctagccgtcctagacatatcatgtagccgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1783 tcttctccatcaacagcgtgttcttctagctagccgtcctagacatatcatgtagccgaa 1724 Query: 241 ggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaagac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 ggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaagac 1664 Query: 301 cagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggcagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 cagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggcagga 1604 Query: 361 ccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgta 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1603 ccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgta 1544 Query: 421 ccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttgaaactactgca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1543 ccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttgaaactactgca 1484 Query: 481 gctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaagttgatcctcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaagttgatcctcg 1424 Query: 541 gagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaagctcaaagtta 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1423 gagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaagctcaaagtta 1364 Query: 601 tcgctttttagaatctccactagtgggacaaacacagcagtaggcttgaaggcaccatat 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1363 tcgctttttagaatctccactagtgggacaaacacagcagtaggcttgaaggcaccatat 1304 Query: 661 atttctgggatgggagtggttc 682 ||||||||||| |||||||||| Sbjct: 1303 atttctgggat-ggagtggttc 1283
>gb|AF467542.1| Triticum aestivum putative aldehyde dehydrogenase WIS1 (wis1) mRNA, complete cds Length = 1999 Score = 827 bits (417), Expect = 0.0 Identities = 606/665 (91%), Gaps = 8/665 (1%) Strand = Plus / Minus Query: 16 taacatctaaagctccattaacaaccctcgtggtactccattcataattatgacctttac 75 ||||||||||||||||||| |||||| |||| |||||||||||||||||| |||||||| Sbjct: 1968 taacatctaaagctccattgacaaccatcgtagtactccattcataattacgacctttat 1909 Query: 76 tttgttcttgggagtcgagattctcccaatt-gcctacacggggcttccattattcaaca 134 | ||||| | || ||| ||| |||||||||| ||||||||| |||||||||||||||||| Sbjct: 1908 tgtgttccttggggtccagactctcccaatttgcctacacgaggcttccattattcaaca 1849 Query: 135 caacacggtaccagtcctcgaccagctaattcggtccgtgtagccttcttctccatcaac 194 |||||| | |||| ||| |||||||||||| |||||||| || |||| ||||||| | Sbjct: 1848 caacacactgtcagttctcaaccagctaattctgtccgtgttgctttct-ctccatcgcc 1790 Query: 195 ag-cgtgttcttctagctagccgtcctagac-----atatcatgtagccgaaggaagtgc 248 || ||||||||||||||||| ||||||| | |||||||||||||| ||||||||| Sbjct: 1789 agtcgtgttcttctagctagttgtcctagcctaggcatatcatgtagccgcaggaagtgc 1730 Query: 249 ccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgag 308 ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1729 ccacttcttgggcaaggggccaatgtcatatatgatctccctgtggcacgaccagacgag 1670 Query: 309 tttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacca 368 ||||||||||||||||||||| ||||| |||||||||||||| || |||||||||||||| Sbjct: 1669 tttgatggcttctggagtgccgatccctgcgcctcttgggtcgcccgcaggaccaaacca 1610 Query: 369 gtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgttaac 428 |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 1609 atggttctgcggagcgccagtggtccttgctcgaattccagcatacgttgtcccgttaac 1550 Query: 429 tgatttcccgagtacttcctgcaggaataatttgtcgtttgaaactactgcagctgtcag 488 ||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1549 cgatctccccagtacttcctgcaggaataacttgtcgtttgaaactactgcagctgtcag 1490 Query: 489 atgcgcattcatcctctcgcaggcttctaataccaattcaagttgatcctcggagtattc 548 ||||||||||||||| || ||||||||||||||||||||||| ||||| || |||||||| Sbjct: 1489 atgcgcattcatcctttcacaggcttctaataccaattcaagctgatcttcagagtattc 1430 Query: 549 tgtaaccacctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttt 608 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1429 tgtaaccacctggaaaggaccaaatatctcctttgtcacaagctcaaagttatcgctttt 1370 Query: 609 tagaatctccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgg 668 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 1369 aagaatctccactagtgggacaaatacagcagtaggcttgatggcaccatatatttctgg 1310 Query: 669 gatgg 673 ||||| Sbjct: 1309 gatgg 1305
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 712 bits (359), Expect = 0.0 Identities = 366/367 (99%), Gaps = 1/367 (0%) Strand = Plus / Minus Query: 1 ttcttttactagtagtaacatctaaagctccattaacaaccctcgtggtactccattcat 60 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11555 ttcttttactag-agtaacatctaaagctccattaacaaccctcgtggtactccattcat 11497 Query: 61 aattatgacctttactttgttcttgggagtcgagattctcccaattgcctacacggggct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11496 aattatgacctttactttgttcttgggagtcgagattctcccaattgcctacacggggct 11437 Query: 121 tccattattcaacacaacacggtaccagtcctcgaccagctaattcggtccgtgtagcct 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11436 tccattattcaacacaacacggtaccagtcctcgaccagctaattcggtccgtgtagcct 11377 Query: 181 tcttctccatcaacagcgtgttcttctagctagccgtcctagacatatcatgtagccgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11376 tcttctccatcaacagcgtgttcttctagctagccgtcctagacatatcatgtagccgaa 11317 Query: 241 ggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaagac 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11316 ggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaagac 11257 Query: 301 cagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggcagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11256 cagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggcagga 11197 Query: 361 ccaaacc 367 ||||||| Sbjct: 11196 ccaaacc 11190 Score = 236 bits (119), Expect = 8e-59 Identities = 126/127 (99%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 556 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 10226 Query: 616 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggatggga 675 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10225 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggat-gga 10167 Query: 676 gtggttc 682 ||||||| Sbjct: 10166 gtggttc 10160 Score = 228 bits (115), Expect = 2e-56 Identities = 115/115 (100%) Strand = Plus / Minus Query: 446 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10797 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 10738 Query: 506 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 560 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10737 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 10683 Score = 168 bits (85), Expect = 2e-38 Identities = 85/85 (100%) Strand = Plus / Minus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11104 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 11045 Query: 425 taactgatttcccgagtacttcctg 449 ||||||||||||||||||||||||| Sbjct: 11044 taactgatttcccgagtacttcctg 11020
>dbj|AK121765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091O16, full insert sequence Length = 1932 Score = 416 bits (210), Expect = e-113 Identities = 384/442 (86%) Strand = Plus / Minus Query: 230 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 289 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 1812 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 1753 Query: 290 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 349 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 1752 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 1693 Query: 350 caccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccag 409 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || || | Sbjct: 1692 caccagcaggcccaaaccagtggttctgtggagcaccagttgtccttgctcggatgccgg 1633 Query: 410 catacgtcgtaccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttg 469 |||| || || |||||||||||| ||| |||||||||||||||||||| |||||||| Sbjct: 1632 catatgttgtcccgttaactgatcgcccaagtacttcctgcaggaataaagggtcgtttg 1573 Query: 470 aaactactgcagctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaa 529 |||| |||||||| |||||||| || |||||||| || |||||||||||||| ||||||| Sbjct: 1572 aaacaactgcagccgtcagatgagcgttcatcctttcacaggcttctaatactaattcaa 1513 Query: 530 gttgatcctcggagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaa 589 | | ||| || || || |||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 1512 gctcatcatcagaatactctgtaaccacctggaaaggaccaaagatctcccttgtcacaa 1453 Query: 590 gctcaaagttatcgctttttagaatctccactagtgggacaaacacagcagtaggcttga 649 ||||||| || | ||||| || || ||| ||| || ||||| |||||||| || |||| Sbjct: 1452 gctcaaaattgccacttttaaggatttccgatagaggaacaaatacagcagttggtttga 1393 Query: 650 aggcaccatatatttctgggat 671 |||||||||||||||||||||| Sbjct: 1392 aggcaccatatatttctgggat 1371
>gb|AY105541.1| Zea mays PCO077463 mRNA sequence Length = 2150 Score = 379 bits (191), Expect = e-102 Identities = 368/427 (86%) Strand = Plus / Minus Query: 238 gaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaa 297 |||||||| |||||| ||| ||||| ||| || | ||||||||||| ||||||||||| Sbjct: 1761 gaaggaagcgcccagctctcgggcacgggcccgacgtcatatatgacttccctgtggcag 1702 Query: 298 gaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggca 357 |||||||| |||||||||||||| ||||| || ||||| ||||||| || |||||||| Sbjct: 1701 gaccagacaagtttgatggcttccggagtcccgatccctgcgcctcgcggatcaccggcc 1642 Query: 358 ggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtc 417 || |||||||||||||||||||||||||| |||||||| ||||||||||| || || || Sbjct: 1641 gggccaaaccagtggttctgtggagcgcccgtggtcctcgctcgaattccggcgtaggtt 1582 Query: 418 gtaccgttaactgatttcccgagtacttcctgcaggaataatttgtcgtttgaaactact 477 || |||||||| ||| |||| ||||| ||||||||||||| ||||||||| || ||| Sbjct: 1581 gtcccgttaacggatctcccaagtacatcctgcaggaatagcgggtcgtttgagacaact 1522 Query: 478 gcagctgtcagatgcgcattcatcctctcgcaggcttctaataccaattcaagttgatcc 537 |||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||| Sbjct: 1521 gcagctgtcagatgcgcattcatcctttcgcaggcttctaagaccaactcaagctgatcc 1462 Query: 538 tcggagtattctgtaaccacctggaaaggaccaaatatctccttcgtcacaagctcaaag 597 || ||||||||||| || |||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1461 tcagagtattctgtgactacctggaatggaccaaatatctcctttgtcacaagctcgaag 1402 Query: 598 ttatcgctttttagaatctccactagtgggacaaacacagcagtaggcttgaaggcacca 657 || | ||||||||||| || |||| || ||||| |||||||||||||| | ||||||| Sbjct: 1401 ttcccactttttagaatttcttctagaggaacaaatacagcagtaggcttcatggcacca 1342 Query: 658 tatattt 664 || |||| Sbjct: 1341 taaattt 1335
>gb|DQ154924.1| Triticum turgidum RAB7 (RAB7) gene, exons 1, 2 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 9338 Score = 377 bits (190), Expect = e-101 Identities = 332/374 (88%), Gaps = 14/374 (3%) Strand = Plus / Minus Query: 1 ttcttttactagtagtaacatctaaagctccattaacaaccctcgtggtact-ccattca 59 |||||||||||| || |||||||||||||||||| |||||| |||| ||||| ||||||| Sbjct: 8749 ttcttttactag-agcaacatctaaagctccattgacaaccatcgtagtacttccattca 8691 Query: 60 taattatgacctttactttgttctt-gggagtcgagattctcccaattgcctacacgggg 118 ||||||||||||||| | ||||| | ||| ||||||| ||||||||||||||||||| || Sbjct: 8690 taattatgacctttattgtgttcctagggggtcgagactctcccaattgcctacacgagg 8631 Query: 119 cttccattattcaacacaacacggtaccagtcctcgaccagctaattcggtccgtgtagc 178 ||||||||||||||||||| | |||| ||| |||||||||||| |||||||| || Sbjct: 8630 cttccattattcaacacaa-----tgtcagttctcaaccagctaattctgtccgtgttgc 8576 Query: 179 cttcttctccatcaacagcgtgttcttctagctagccgtcctaga-----catatcatgt 233 |||| ||||||| | ||||||||||||||||| ||||||| |||||||||| Sbjct: 8575 tttct-ctccatcgccgtcgtgttcttctagctagttgtcctagcttaggcatatcatgt 8517 Query: 234 agccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtg 293 ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 8516 agccgcaggaagtgcccacttcttgggcaagggaccaatgtcatatatgatctccctgtg 8457 Query: 294 gcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcacc 353 |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 8456 gcaagaccagacgagtttgatggcttctggagtgccgatccccgcgcctctcgggtcacc 8397 Query: 354 ggcaggaccaaacc 367 |||||||||||||| Sbjct: 8396 ggcaggaccaaacc 8383 Score = 172 bits (87), Expect = 1e-39 Identities = 108/115 (93%) Strand = Plus / Minus Query: 446 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 505 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 8010 cctgcaggaacaatttgtcgtttgaaactactgcagctgtcagatgcgcattcatccttt 7951 Query: 506 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 560 |||||||||||||||| || ||||| || ||||| |||||||||||||||||||| Sbjct: 7950 cgcaggcttctaatactaaatcaagctgttcctcagagtattctgtaaccacctg 7896 Score = 147 bits (74), Expect = 6e-32 Identities = 107/118 (90%) Strand = Plus / Minus Query: 556 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 615 |||||||||||||||||||||||||| ||||||||||| |||||| | |||| || ||| Sbjct: 7484 acctggaaaggaccaaatatctcctttgtcacaagctcgaagttaccatttttaaggatc 7425 Query: 616 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggatgg 673 ||||||||||||||||| |||||||| || ||||| |||||||||||||||||||||| Sbjct: 7424 tccactagtgggacaaatacagcagtcggtttgaaagcaccatatatttctgggatgg 7367 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 ||||||||||||| |||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 8297 accagtggttctgcggagcgccggtggtccttgctcgaattccagcatacgttgtcccgt 8238 Query: 425 taactgatttcccgagtacttcctg 449 |||| ||| | |||||||||||||| Sbjct: 8237 taaccgatctaccgagtacttcctg 8213
>gb|DQ154922.1| Aegilops tauschii delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exon 14 and partial cds Length = 350 Score = 339 bits (171), Expect = 7e-90 Identities = 309/351 (88%), Gaps = 8/351 (2%) Strand = Plus / Minus Query: 43 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagattctccc 102 |||| |||||||||||||||||| |||||||| | ||||| | || ||| ||| |||||| Sbjct: 350 tcgtagtactccattcataattacgacctttattgtgttccttggggtccagactctccc 291 Query: 103 aatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagct 161 |||| ||||||||| |||||||||||||||||||||||| | |||| ||| ||||||| Sbjct: 290 aatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagct 231 Query: 162 aattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcct 220 ||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| ||||| Sbjct: 230 aattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcct 172 Query: 221 agac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtc 275 || | |||||||||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 171 agcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgtc 112 Query: 276 atatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccc 335 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 111 atatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatccc 52 Query: 336 cgcgcctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgcc 386 |||||||||||||| || |||||||||||||| |||||||| |||||||| Sbjct: 51 tgcgcctcttgggtcgcccgcaggaccaaaccaatggttctgcggagcgcc 1
>gb|DQ154919.1| Triticum aestivum B genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 439 Score = 339 bits (171), Expect = 7e-90 Identities = 291/327 (88%), Gaps = 8/327 (2%) Strand = Plus / Minus Query: 48 gtactccattcataattatgacctttactttgttcttgggagtcgagattctcccaatt- 106 |||||||||||||||||| |||||||| | ||||| | || ||| ||| |||||||||| Sbjct: 433 gtactccattcataattacgacctttattgtgttccttggggtccagactctcccaattt 374 Query: 107 gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaattc 166 ||||||||| |||||||||||||||||||||||| | |||| ||| |||||||||||| Sbjct: 373 gcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagctaattc 314 Query: 167 ggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcctagac- 224 |||||||| || |||| ||||||| ||| ||||||||||||||||| ||||||| | Sbjct: 313 tgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcctagcct 255 Query: 225 ----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatata 280 |||||||||||||| |||||||||||| |||||||||||||| ||||||||||||| Sbjct: 254 aggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgtcatata 195 Query: 281 tgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgc 340 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 194 tgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcgc 135 Query: 341 ctcttgggtcaccggcaggaccaaacc 367 |||| |||||||||||||||||||||| Sbjct: 134 ctctcgggtcaccggcaggaccaaacc 108
>gb|DQ154918.1| Triticum monococcum delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 433 Score = 337 bits (170), Expect = 3e-89 Identities = 286/322 (88%), Gaps = 12/322 (3%) Strand = Plus / Minus Query: 52 tccattcataattatgacctttactttgttc-ttgggagtcgagattctcccaattgcct 110 ||||||||||||||||||||||| | ||||| ||||| ||||||| |||||||||||||| Sbjct: 423 tccattcataattatgacctttattgtgttccttgggggtcgagactctcccaattgcct 364 Query: 111 acacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaattcggtc 170 ||||| ||||||||||||||||||||| | |||| ||| ||||||||||| ||| Sbjct: 363 acacgaggcttccattattcaacacaa-----tgtcagttctcaaccagctaattgtgtc 309 Query: 171 cgtgtagccttcttctccatcaacagcgtgttcttctagctagccgtcctagac-----a 225 ||||| || |||| ||||||| | ||||||||||||||||| ||||||| | | Sbjct: 308 cgtgttgctttct-ctccatcgccgtcgtgttcttctagctagttgtcctagcctaggca 250 Query: 226 tatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatc 285 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 249 tatcatgtagccgcaggaagtgcccacttcttgggcaagggaccaatgtcatatatgatc 190 Query: 286 tccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctctt 345 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 189 tccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcgcctctc 130 Query: 346 gggtcaccggcaggaccaaacc 367 |||||||||||||||||||||| Sbjct: 129 gggtcaccggcaggaccaaacc 108 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 365 accagtggttctgtggagcgcc 386 |||||||||||||||||||||| Sbjct: 22 accagtggttctgtggagcgcc 1
>gb|DQ154917.1| Triticum turgidum B genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 433 Score = 337 bits (170), Expect = 3e-89 Identities = 286/322 (88%), Gaps = 12/322 (3%) Strand = Plus / Minus Query: 52 tccattcataattatgacctttactttgttctt-gggagtcgagattctcccaattgcct 110 ||||||||||||||||||||||| | ||||| | ||| ||||||| |||||||||||||| Sbjct: 423 tccattcataattatgacctttattgtgttcctagggggtcgagactctcccaattgcct 364 Query: 111 acacggggcttccattattcaacacaacacggtaccagtcctcgaccagctaattcggtc 170 ||||| ||||||||||||||||||||| | |||| ||| |||||||||||| ||| Sbjct: 363 acacgaggcttccattattcaacacaa-----tgtcagttctcaaccagctaattctgtc 309 Query: 171 cgtgtagccttcttctccatcaacagcgtgttcttctagctagccgtcctaga-----ca 225 ||||| || |||| ||||||| | ||||||||||||||||| ||||||| || Sbjct: 308 cgtgttgctttct-ctccatcgccgtcgtgttcttctagctagttgtcctagcttaggca 250 Query: 226 tatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatc 285 ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 249 tatcatgtagccgcaggaagtgcccacttcttgggcaagggaccaatgtcatatatgatc 190 Query: 286 tccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctctt 345 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 189 tccctgtggcaagaccagacgagtttgatggcttctggagtgccgatccccgcgcctctc 130 Query: 346 gggtcaccggcaggaccaaacc 367 |||||||||||||||||||||| Sbjct: 129 gggtcaccggcaggaccaaacc 108
>gb|DQ154921.1| Aegilops tauschii delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 428 Score = 317 bits (160), Expect = 3e-83 Identities = 292/332 (87%), Gaps = 8/332 (2%) Strand = Plus / Minus Query: 43 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagattctccc 102 |||| |||||||||||||||||| |||||||| | ||||| | || ||| ||| |||||| Sbjct: 428 tcgtagtactccattcataattacgacctttattgtgttccttggggtccagactctccc 369 Query: 103 aatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagct 161 |||| ||||||||| |||||||||||||||||||||||| | |||| ||| ||||||| Sbjct: 368 aatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagct 309 Query: 162 aattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcct 220 ||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| ||||| Sbjct: 308 aattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcct 250 Query: 221 agac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtc 275 || | |||||||||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 249 agcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgtc 190 Query: 276 atatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccc 335 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 189 atatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatccc 130 Query: 336 cgcgcctcttgggtcaccggcaggaccaaacc 367 |||||||||||||| || ||||||||||||| Sbjct: 129 tgcgcctcttgggtcgcccgcaggaccaaacc 98
>gb|DQ154920.1| Triticum aestivum D genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 428 Score = 317 bits (160), Expect = 3e-83 Identities = 292/332 (87%), Gaps = 8/332 (2%) Strand = Plus / Minus Query: 43 tcgtggtactccattcataattatgacctttactttgttcttgggagtcgagattctccc 102 |||| |||||||||||||||||| |||||||| | ||||| | || ||| ||| |||||| Sbjct: 428 tcgtagtactccattcataattacgacctttattgtgttccttggggtccagactctccc 369 Query: 103 aatt-gcctacacggggcttccattattcaacacaacacggtaccagtcctcgaccagct 161 |||| ||||||||| |||||||||||||||||||||||| | |||| ||| ||||||| Sbjct: 368 aatttgcctacacgaggcttccattattcaacacaacacactgtcagttctcaaccagct 309 Query: 162 aattcggtccgtgtagccttcttctccatcaacag-cgtgttcttctagctagccgtcct 220 ||||| |||||||| || |||| ||||||| ||| ||||||||||||||||| ||||| Sbjct: 308 aattctgtccgtgttgctttct-ctccatcgccagtcgtgttcttctagctagttgtcct 250 Query: 221 agac-----atatcatgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtc 275 || | |||||||||||||| |||||||||||| |||||||||||||| |||||||| Sbjct: 249 agcctaggcatatcatgtagccgcaggaagtgcccacttcttgggcaaggggccaatgtc 190 Query: 276 atatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccc 335 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 189 atatatgatctccctgtggcacgaccagacgagtttgatggcttctggagtgccgatccc 130 Query: 336 cgcgcctcttgggtcaccggcaggaccaaacc 367 |||||||||||||| || ||||||||||||| Sbjct: 129 tgcgcctcttgggtcgcccgcaggaccaaacc 98
>gb|DQ154916.1| Triticum turgidum A genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 432 Score = 252 bits (127), Expect = 1e-63 Identities = 160/171 (93%) Strand = Plus / Minus Query: 197 cgtgttcttctagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttct 256 ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 278 cgtgttcttctagctagttgtcctaggcatatcatgtagccgcaggaagtgcccacttct 219 Query: 257 tgggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatgg 316 | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 218 taggcaggggaccaatgtcgtatatgatctccctgtggcaagaccagacgagtttgatgg 159 Query: 317 cttctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacc 367 ||||||||||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 158 cttctggagtgccgatccccgcgcctctcgggtcacccgcaggaccaaacc 108 Score = 79.8 bits (40), Expect = 1e-11 Identities = 75/84 (89%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 52 tccattcataattatgacctttactttgttc-ttgggagtcgagattctcccaattgcct 110 ||||||||||||||||||||||| | ||||| ||||| ||| ||| |||||||| |||| Sbjct: 422 tccattcataattatgacctttattgtgttccttgggggtcaagaccctcccaat-gcct 364 Query: 111 acacggggcttccattattcaaca 134 ||||| |||||||||||||||||| Sbjct: 363 acacgaggcttccattattcaaca 340
>gb|DQ154915.1| Triticum aestivum A genome delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, exons 14, 15 and partial cds Length = 431 Score = 252 bits (127), Expect = 1e-63 Identities = 160/171 (93%) Strand = Plus / Minus Query: 197 cgtgttcttctagctagccgtcctagacatatcatgtagccgaaggaagtgcccagttct 256 ||||||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||| Sbjct: 278 cgtgttcttctagctagttgtcctaggcatatcatgtagccgcaggaagtgcccacttct 219 Query: 257 tgggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatgg 316 | |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 218 taggcaggggaccaatgtcgtatatgatctccctgtggcaagaccagacgagtttgatgg 159 Query: 317 cttctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaacc 367 ||||||||||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 158 cttctggagtgccgatccccgcgcctctcgggtcacccgcaggaccaaacc 108 Score = 71.9 bits (36), Expect = 3e-09 Identities = 74/84 (88%), Gaps = 2/84 (2%) Strand = Plus / Minus Query: 52 tccattcataattatgacctttactttgttc-ttgggagtcgagattctcccaattgcct 110 |||||| |||||||||||||||| | ||||| ||||| ||| ||| |||||||| |||| Sbjct: 421 tccatttataattatgacctttattgtgttccttgggggtcaagaccctcccaat-gcct 363 Query: 111 acacggggcttccattattcaaca 134 ||||| |||||||||||||||||| Sbjct: 362 acacgaggcttccattattcaaca 339
>ref|XM_475772.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 238 bits (120), Expect = 2e-59 Identities = 195/220 (88%) Strand = Plus / Minus Query: 230 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 289 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 1540 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 1481 Query: 290 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 349 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 1480 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 1421 Query: 350 caccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattccag 409 |||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| || || | Sbjct: 1420 caccagcaggcccaaaccagtggttctgtggagcaccagttgtccttgctcggatgccgg 1361 Query: 410 catacgtcgtaccgttaactgatttcccgagtacttcctg 449 |||| || || |||||||||||| ||| ||||||||||| Sbjct: 1360 catatgttgtcccgttaactgatcgcccaagtacttcctg 1321 Score = 93.7 bits (47), Expect = 7e-16 Identities = 98/115 (85%) Strand = Plus / Minus Query: 557 cctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatct 616 |||||||||||||||| |||||| | |||||||||||||| || | ||||| || || | Sbjct: 1324 cctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggattt 1265 Query: 617 ccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggat 671 || ||| || ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 1264 ccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttctgggat 1210
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 230 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 289 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 72907 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 72966 Query: 290 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 349 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 72967 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 73026 Query: 350 caccggcaggaccaaacc 367 |||| ||||| ||||||| Sbjct: 73027 caccagcaggcccaaacc 73044 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 556 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 615 ||||||||||||||||| |||||| | |||||||||||||| || | ||||| || || Sbjct: 73791 acctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggatt 73850 Query: 616 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggat 671 ||| ||| || ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 73851 tccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttctgggat 73906 Score = 85.7 bits (43), Expect = 2e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 446 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 505 ||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| | Sbjct: 73415 cctgcaggaataaagggtcgtttgaaacaactgcagccgtcagata-gcgttcatccttt 73473 Query: 506 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 560 | |||||||||||||| |||||||| | ||| || || || |||||||||||||| Sbjct: 73474 cacaggcttctaatactaattcaagctcatcatcagaatactctgtaaccacctg 73528 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 ||||||||||||||||||| ||||| ||||||||||| || || ||||| || || |||| Sbjct: 73128 accagtggttctgtggagcaccagttgtccttgctcggatgccggcatatgttgtcccgt 73187 Query: 425 taactgatttcccgagtacttcctg 449 |||||||| ||| ||||||||||| Sbjct: 73188 taactgatcgcccaagtacttcctg 73212
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 163 bits (82), Expect = 9e-37 Identities = 124/138 (89%) Strand = Plus / Plus Query: 230 atgtagccgaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccc 289 ||||||| ||||| ||||||| |||||| |||||||| |||||||||||||||||||||| Sbjct: 26428216 atgtagcggaaggtagtgcccggttcttaggcaaggggccaatgtcatatatgatctccc 26428275 Query: 290 tgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggt 349 ||||||||||||| |||||||| |||||||||||||| || ||||| || |||||||| | Sbjct: 26428276 tgtggcaagaccaaacgagtttaatggcttctggagttccgatccctgcacctcttggat 26428335 Query: 350 caccggcaggaccaaacc 367 |||| ||||| ||||||| Sbjct: 26428336 caccagcaggcccaaacc 26428353 Score = 95.6 bits (48), Expect = 2e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 556 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 615 ||||||||||||||||| |||||| | |||||||||||||| || | ||||| || || Sbjct: 26429100 acctggaaaggaccaaagatctcccttgtcacaagctcaaaattgccacttttaaggatt 26429159 Query: 616 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatatttctgggat 671 ||| ||| || ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 26429160 tccgatagaggaacaaatacagcagttggtttgaaggcaccatatatttctgggat 26429215 Score = 85.7 bits (43), Expect = 2e-13 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 446 cctgcaggaataatttgtcgtttgaaactactgcagctgtcagatgcgcattcatcctct 505 ||||||||||||| |||||||||||| |||||||| ||||||| || |||||||| | Sbjct: 26428724 cctgcaggaataaagggtcgtttgaaacaactgcagccgtcagata-gcgttcatccttt 26428782 Query: 506 cgcaggcttctaataccaattcaagttgatcctcggagtattctgtaaccacctg 560 | |||||||||||||| |||||||| | ||| || || || |||||||||||||| Sbjct: 26428783 cacaggcttctaatactaattcaagctcatcatcagaatactctgtaaccacctg 26428837 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Plus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 ||||||||||||||||||| ||||| ||||||||||| || || ||||| || || |||| Sbjct: 26428437 accagtggttctgtggagcaccagttgtccttgctcggatgccggcatatgttgtcccgt 26428496 Query: 425 taactgatttcccgagtacttcctg 449 |||||||| ||| ||||||||||| Sbjct: 26428497 taactgatcgcccaagtacttcctg 26428521
>gb|AF467541.1| Zea mays putative aldehyde dehydrogenase MIS1 (mis1) gene, complete cds Length = 11504 Score = 127 bits (64), Expect = 5e-26 Identities = 91/100 (91%) Strand = Plus / Minus Query: 462 gtcgtttgaaactactgcagctgtcagatgcgcattcatcctctcgcaggcttctaatac 521 ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 10106 gtcgtttgagacaactgcagctgtcagatgcgcattcatcctttcgcaggcttctaagac 10047 Query: 522 caattcaagttgatcctcggagtattctgtaaccacctgg 561 ||| ||||| |||||||| ||||||||||| || |||||| Sbjct: 10046 caactcaagctgatcctcagagtattctgtgactacctgg 10007 Score = 99.6 bits (50), Expect = 1e-17 Identities = 110/130 (84%) Strand = Plus / Minus Query: 238 gaaggaagtgcccagttcttgggcaagggaccaatgtcatatatgatctccctgtggcaa 297 |||||||| |||||| ||| ||||| ||| || | ||||||||||| ||||||||||| Sbjct: 10612 gaaggaagcgcccagctctcgggcacgggcccgacgtcatatatgacttccctgtggcag 10553 Query: 298 gaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttgggtcaccggca 357 |||||||| |||||||||||||| ||||| || ||||| ||||||| || |||||||| Sbjct: 10552 gaccagacaagtttgatggcttccggagtcccgatccctgcgcctcgcggatcaccggcc 10493 Query: 358 ggaccaaacc 367 || ||||||| Sbjct: 10492 gggccaaacc 10483 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 556 acctggaaaggaccaaatatctccttcgtcacaagctcaaagttatcgctttttagaatc 615 |||||||| ||||||||||||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 8803 acctggaatggaccaaatatctcctttgtcacaagctcgaagttcccactttttagaatt 8744 Query: 616 tccactagtgggacaaacacagcagtaggcttgaaggcaccatatattt 664 || |||| || ||||| |||||||||||||| | ||||||||| |||| Sbjct: 8743 tcttctagaggaacaaatacagcagtaggcttcatggcaccataaattt 8695 Score = 81.8 bits (41), Expect = 3e-12 Identities = 74/85 (87%) Strand = Plus / Minus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 |||||||||||||||||||||| |||||||| ||||||||||| || || || || |||| Sbjct: 10381 accagtggttctgtggagcgcccgtggtcctcgctcgaattccggcgtaggttgtcccgt 10322 Query: 425 taactgatttcccgagtacttcctg 449 |||| ||| |||| ||||| ||||| Sbjct: 10321 taacggatctcccaagtacatcctg 10297
>gb|BT014577.1| Lycopersicon esculentum clone 134032F, mRNA sequence Length = 2510 Score = 105 bits (53), Expect = 2e-19 Identities = 143/173 (82%) Strand = Plus / Minus Query: 259 ggcaagggaccaatgtcatatatgatctccctgtggcaagaccagacgagtttgatggct 318 |||| |||||||| ||||| ||||| || |||||||||||||| || ||||| || ||| Sbjct: 2252 ggcatgggaccaacatcatagatgatttctctgtggcaagaccatacaagtttaatagct 2193 Query: 319 tctggagtgccaatccccgcgcctcttgggtcaccggcaggaccaaaccagtggttctgt 378 |||||||| || || || || ||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2192 tctggagtacctattccggctcctctggggtccccggcaggaccaaaccagtgattctgg 2133 Query: 379 ggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgttaactga 431 ||||| || || || ||||||| | ||||||||| || || || |||||||| Sbjct: 2132 ggagcccctgttgttcttgctctcaatccagcataagtggttccattaactga 2080
>emb|X86733.1|LUHFIS1GE L.usitatissimum mRNA for fis1 protein Length = 1856 Score = 83.8 bits (42), Expect = 7e-13 Identities = 102/122 (83%) Strand = Plus / Minus Query: 280 atgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcg 339 |||||||| | ||||||||||||||| ||||| ||||||||||| || |||||||| || Sbjct: 1660 atgatctctcggtggcaagaccagacaagtttaatggcttctggtgttccaatccctgca 1601 Query: 340 cctcttgggtcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgct 399 ||||| ||||| || || || |||||||| || ||||| ||||| || || || |||||| Sbjct: 1600 cctctcgggtctccagctggtccaaaccaatgattctgcggagctcctgtcgttcttgct 1541 Query: 400 cg 401 || Sbjct: 1540 cg 1539
>gb|AC122726.21| Medicago truncatula clone mth2-23o24, complete sequence Length = 130999 Score = 60.0 bits (30), Expect = 1e-05 Identities = 78/94 (82%) Strand = Plus / Plus Query: 274 tcatatatgatctccctgtggcaagaccagacgagtttgatggcttctggagtgccaatc 333 ||||| || ||||| || ||||||||||| || ||||| || || ||||| || |||||| Sbjct: 33619 tcataaattatctctctatggcaagaccatacaagttttatagcctctggtgttccaatc 33678 Query: 334 cccgcgcctcttgggtcaccggcaggaccaaacc 367 || || ||||| ||||||||||| || ||||||| Sbjct: 33679 cctgcacctctggggtcaccggctggtccaaacc 33712 Score = 46.1 bits (23), Expect = 0.15 Identities = 71/87 (81%) Strand = Plus / Plus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 ||||||| || |||||||| ||||| |||||||||| | |||||||| || || || | Sbjct: 33809 accagtgattttgtggagctccagttgtccttgctcttagaccagcataagtagtgccat 33868 Query: 425 taactgatttcccgagtacttcctgca 451 | ||||||||||| | |||||||||| Sbjct: 33869 ttactgatttcccaatcacttcctgca 33895
>ref|NM_125647.2| Arabidopsis thaliana ALDH12A1; 1-pyrroline-5-carboxylate dehydrogenase/ aldehyde dehydrogenase AT5G62530 (ALDH12A1) mRNA, complete cds Length = 2527 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1701 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1642 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 408 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1641 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1582 Query: 409 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 449 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1581 gcatatgtagtcccattcactgagttccctattacttcctg 1541
>gb|BT010391.1| Arabidopsis thaliana At5g62530 mRNA, complete cds Length = 1671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1610 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1551 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 408 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1550 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1491 Query: 409 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 449 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1490 gcatatgtagtcccattcactgagttccctattacttcctg 1450
>gb|BT000746.1| Arabidopsis thaliana clone RAFL09-76-E19 (R19425) putative dehydrogenase (At5g62530) mRNA, complete cds Length = 2024 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1693 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1634 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 408 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1633 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1574 Query: 409 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 449 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1573 gcatatgtagtcccattcactgagttccctattacttcctg 1533
>gb|AY065072.1| Arabidopsis thaliana dehydrogenase (K19B1.14) mRNA, complete cds Length = 1975 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1660 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1601 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 408 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 1600 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 1541 Query: 409 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 449 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 1540 gcatatgtagtcccattcactgagttccctattacttcctg 1500
>emb|BX832270.1|CNS0A0Z3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH62ZC06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 795 Score = 58.0 bits (29), Expect = 4e-05 Identities = 128/161 (79%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 455 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 396 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagtggtccttgctcgaattcca 408 || || ||||| ||||||||||| ||||| ||||| ||||| || ||| ||| | |||| Sbjct: 395 tcccccgcaggtccaaaccagtgattctgaggagctccagttgttcttcctcttagtcca 336 Query: 409 gcatacgtcgtaccgttaactgatttcccgagtacttcctg 449 ||||| || || || || ||||| ||||| | ||||||||| Sbjct: 335 gcatatgtagtcccattcactgagttccctattacttcctg 295
>dbj|AP006364.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT28B04, TM0170, complete sequence Length = 101172 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 ||||| |||||||| || ||||| ||||||||||| || ||||| || || || || ||| Sbjct: 94800 ctgtgacaagaccacactagttttatggcttctggtgttccaattcctgcacccctaggg 94859 Query: 349 tcaccggcaggaccaaacc 367 ||||| ||||| ||||||| Sbjct: 94860 tcacccgcaggtccaaacc 94878 Score = 50.1 bits (25), Expect = 0.010 Identities = 70/85 (82%) Strand = Plus / Plus Query: 365 accagtggttctgtggagcgccagtggtccttgctcgaattccagcatacgtcgtaccgt 424 ||||||| ||||||||||| ||||| || ||||||| | |||||||| || ||||| | Sbjct: 94958 accagtgattctgtggagctccagttgttcttgctcttagaccagcataagtagtaccat 95017 Query: 425 taactgatttcccgagtacttcctg 449 | |||||||| || | ||||||||| Sbjct: 95018 tgactgatttgccaattacttcctg 95042
>gb|AY039787.1| Arabidopsis thaliana delta-1-pyrroline-5-carboxylate dehydrogenase precursor (P5CDH) mRNA, complete cds; nuclear gene for mitochondrial product Length = 2025 Score = 50.1 bits (25), Expect = 0.010 Identities = 82/101 (81%) Strand = Plus / Minus Query: 289 ctgtggcaagaccagacgagtttgatggcttctggagtgccaatccccgcgcctcttggg 348 |||||||| ||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct: 1697 ctgtggcatgaccaaaccagctttatagcctctggtgtccctatcccggcccctctcggg 1638 Query: 349 tcaccggcaggaccaaaccagtggttctgtggagcgccagt 389 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct: 1637 tcccccgcaggtccaaaccagtgattctgaggagctccagt 1597
>ref|XM_964439.1| PREDICTED: Tribolium castaneum similar to PI-3-kinase-related kinase SMG-1 (LOC658025), mRNA Length = 10143 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 294 gcaagaccagacgagtttgatgg 316 ||||||||||||||||||||||| Sbjct: 1920 gcaagaccagacgagtttgatgg 1942
>ref|XM_642656.1| Dictyostelium discoideum hypothetical protein (DDB0216478), partial mRNA Length = 1008 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cttctaataccaattcaagt 531 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_634296.1| Dictyostelium discoideum hypothetical protein (DDB0218416), partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cttctaataccaattcaagt 531 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_628807.1| Dictyostelium discoideum hypothetical protein (DDB0215083), partial mRNA Length = 1673 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cttctaataccaattcaagt 531 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>ref|XM_628729.1| Dictyostelium discoideum hypothetical protein (DDB0215159), partial mRNA Length = 720 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cttctaataccaattcaagt 531 |||||||||||||||||||| Sbjct: 155 cttctaataccaattcaagt 174
>gb|AC170423.1| Rhesus Macaque BAC CH250-107D17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 167419 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 tacttcctgcaggaataatt 460 |||||||||||||||||||| Sbjct: 151373 tacttcctgcaggaataatt 151354
>emb|AL603841.4| Human DNA sequence from clone RP11-408E1 on chromosome 1 Contains a 35 kDa subunit 1 alpha eukaryotic translation initiation factor 3 (EIF3S1) pseudogene, complete sequence Length = 41617 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ggcttccattattcaacacaacac 140 |||||||||||||||||| ||||| Sbjct: 38282 ggcttccattattcaacataacac 38305
>emb|BX842656.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 11/11 Length = 307337 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 ttcctgcaggaataatttgt 463 |||||||||||||||||||| Sbjct: 150625 ttcctgcaggaataatttgt 150644
>gb|AC010321.8| Homo sapiens chromosome 16 clone CTD-2540M10, complete sequence Length = 207256 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gttaactgatttcccgagta 442 |||||||||||||||||||| Sbjct: 176874 gttaactgatttcccgagta 176855
>gb|AC008938.9| Homo sapiens chromosome 16 clone CTD-2313J23, complete sequence Length = 99486 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gttaactgatttcccgagta 442 |||||||||||||||||||| Sbjct: 40036 gttaactgatttcccgagta 40017
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcatgtagccgaaggaagtg 247 |||||||||||||||||||| Sbjct: 1104489 tcatgtagccgaaggaagtg 1104470 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,907,692 Number of Sequences: 3902068 Number of extensions: 4907692 Number of successful extensions: 81071 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80924 Number of HSP's gapped (non-prelim): 121 length of query: 682 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 659 effective length of database: 17,143,297,704 effective search space: 11297433186936 effective search space used: 11297433186936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
