ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags19c01 |
|---|---|
| Clone Library Name | barley_pub |
>34KD_MYCTU (P65637) 34 kDa antigenic protein homolog| Length = 303 Score = 36.2 bits (82), Expect = 0.094 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Frame = -2 Query: 485 HGAAGSRAVSAVPPGNFYGFQGQSTQGGFR-----EVQQP----SQYGGLGYPSFYQSQN 333 +G G V PG +YG QG G + + QP SQYGG S QS + Sbjct: 174 YGRYGQYGQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYS-SSPSQSGS 232 Query: 332 GMQQEHP-QNPAEGSLNSSQNAPSQP 258 G + P Q PA+ S PS P Sbjct: 233 GYTAQPPAQPPAQSGSQQSHQGPSTP 258
>34KD_MYCBO (P65638) 34 kDa antigenic protein homolog| Length = 303 Score = 36.2 bits (82), Expect = 0.094 Identities = 29/86 (33%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Frame = -2 Query: 485 HGAAGSRAVSAVPPGNFYGFQGQSTQGGFR-----EVQQP----SQYGGLGYPSFYQSQN 333 +G G V PG +YG QG G + + QP SQYGG S QS + Sbjct: 174 YGRYGQYGQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYS-SSPSQSGS 232 Query: 332 GMQQEHP-QNPAEGSLNSSQNAPSQP 258 G + P Q PA+ S PS P Sbjct: 233 GYTAQPPAQPPAQSGSQQSHQGPSTP 258
>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 Score = 35.4 bits (80), Expect = 0.16 Identities = 27/69 (39%), Positives = 31/69 (44%) Frame = +2 Query: 275 SGSCSSFPRQGSAGAPVAYHSATGRSSDTQDHRIERAVAPRGNHPACSGPGSRKSYQVEQ 454 SG P+ ++ VA T RSS RI V PR HP S PG +S Q Sbjct: 406 SGDSDGSPK--TSPKAVARRFTTRRSSSVDQARINCCVPPR-IHPRSSIPGYSRSLTTGQ 462 Query: 455 LKQLLNQQL 481 L LNQQL Sbjct: 463 LSDELNQQL 471
>ERF2_YEAST (P05453) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2) (G1 to S phase transition protein 1) Length = 685 Score = 34.3 bits (77), Expect = 0.36 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 5/95 (5%) Frame = -2 Query: 554 SSQFKEANHYMALQQSDNSAMWLHGAAGSRAVSAV--PPGNFY-GFQGQS--TQGGFREV 390 S+Q +Y Q+ N + G +A +A P G +Y +QG S QGG+++ Sbjct: 4 SNQGNNQQNYQQYSQNGNQQQGNNRYQGYQAYNAQAQPAGGYYQNYQGYSGYQQGGYQQY 63 Query: 389 QQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLN 285 + GY Y Q G QQ +PQ + N Sbjct: 64 NPDA-----GYQQQYNPQGGYQQYNPQGGYQQQFN 93
>YO86_CAEEL (P34622) Hypothetical protein ZK1236.6| Length = 206 Score = 33.9 bits (76), Expect = 0.47 Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Frame = -2 Query: 485 HGAAGSRAVSAVPPGNFYG---FQGQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEH 315 H G+ A + P N YG FQ Q QG + QQPS G Y S Q QQ+ Sbjct: 20 HPIVGAGAAPTMAPQNPYGQQPFQPQFQQG---QYQQPS---GQQYQSMQQQFQSPQQQA 73 Query: 314 PQNPAEGSLNSSQNA 270 P P S Q A Sbjct: 74 PTQPTHPDRESYQTA 88
>RBMS1_HUMAN (P29558) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) (Suppressor of CDC2 with RNA-binding motif 2) Length = 406 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -2 Query: 389 QQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLNSSQNAPSQPSHQMW 243 Q QY YP + Q++ + HP P S SS N S S+ W Sbjct: 8 QMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGW 56
>RBMS1_MOUSE (Q91W59) RNA-binding motif, single-stranded-interacting protein 1| (Single-stranded DNA-binding protein MSSP-1) Length = 403 Score = 33.5 bits (75), Expect = 0.61 Identities = 16/49 (32%), Positives = 21/49 (42%) Frame = -2 Query: 389 QQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLNSSQNAPSQPSHQMW 243 Q QY YP + Q++ + HP P S SS N S S+ W Sbjct: 8 QMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSSNNNSSSSSNSGW 56
>ERF2_CANMA (Q9HGI7) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 712 Score = 33.1 bits (74), Expect = 0.80 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -2 Query: 470 SRAVSAVPPGNFYGFQGQSTQ--GGFREVQQPSQYGGLGYPSFYQSQNGMQQEHPQNPAE 297 ++A + VP G + FQ Q Q GG++ Q +QY GY Y ++ G QQ + Sbjct: 40 NQAQAFVPTGGYQQFQPQQQQQYGGYQ--QNYTQYQAGGYQQNYNNRGGYQQNYNNRGGY 97 Query: 296 GSLNSSQNAPSQPSHQMWQ 240 +++ Q Q +Q Sbjct: 98 QQNYNNRGGYQQQQQQQYQ 116
>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 33.1 bits (74), Expect = 0.80 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = +2 Query: 275 SGSCSSFPRQGSAGAPVAYHSATGRSSDTQDHRIERAVAPRGNHPACSGPGSRKSYQVEQ 454 SG P+ ++ +A A+ RSS RI V PR HP S PG +S Q Sbjct: 404 SGDSDGSPK--TSPKALARRFASRRSSSVDTARINCCVPPR-IHPRSSIPGYSRSLTTGQ 460 Query: 455 LKQLLNQQL 481 L + NQQL Sbjct: 461 LSEEFNQQL 469
>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 33.1 bits (74), Expect = 0.80 Identities = 25/69 (36%), Positives = 32/69 (46%) Frame = +2 Query: 275 SGSCSSFPRQGSAGAPVAYHSATGRSSDTQDHRIERAVAPRGNHPACSGPGSRKSYQVEQ 454 SG P+ ++ +A A+ RSS RI V PR HP S PG +S Q Sbjct: 404 SGDSDGSPK--TSPKALARRFASRRSSSVDTARINCCVPPR-IHPRSSIPGYSRSLTTGQ 460 Query: 455 LKQLLNQQL 481 L + NQQL Sbjct: 461 LSEEFNQQL 469
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 33.1 bits (74), Expect = 0.80 Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 6/66 (9%) Frame = -2 Query: 434 YGFQGQSTQGGFREVQQPSQY---GGLGYPSFYQSQNGMQQEHP---QNPAEGSLNSSQN 273 Y GQS G+ P Y GG G QS G Q +P Q PA S + S Sbjct: 55 YSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYG 114 Query: 272 APSQPS 255 + SQ S Sbjct: 115 SSSQSS 120
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 32.0 bits (71), Expect = 1.8 Identities = 22/77 (28%), Positives = 30/77 (38%) Frame = -2 Query: 488 LHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEHPQ 309 L G G+ P +GF GQ G+ + GL P Y ++G+ P Sbjct: 807 LDGYPGAPGAPGAPGETGFGFPGQV---GYPGPNGDAGAAGLPGPDGYPGRDGLPGT-PG 862 Query: 308 NPAEGSLNSSQNAPSQP 258 P E +N AP QP Sbjct: 863 YPGEAGMNGQDGAPGQP 879
>AKL1_YEAST (P38080) Serine/threonine-protein kinase AKL1 (EC 2.7.11.1)| Length = 1108 Score = 31.6 bits (70), Expect = 2.3 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Frame = -2 Query: 584 ATTMGIDEALSSQFKEANHYMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQG 405 A T+G DEAL+++ + M +S+N ++ A S + NF+ + Q Q Sbjct: 536 AATIGSDEALANEKTAGINKMKQHKSNNPFPKMNVAYHSTNELSNDASNFFLEEQQQGQ- 594 Query: 404 GFREVQQPSQYGGLGYP--SFYQS---QNGMQQEHPQNPAEGS 291 +++ Q + G +P S YQS Q QQ+ P+ PA S Sbjct: 595 RYQQAQNQTGTQGNTFPDESQYQSRVEQQQQQQDQPKGPANYS 637
>ZEN_DROSU (Q24648) Protein zerknuellt| Length = 373 Score = 31.2 bits (69), Expect = 3.0 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 329 MQQEHPQNPAEGSLNSSQNAPSQPSHQM 246 +QQ H Q+ + L+S +N PSQPS M Sbjct: 56 LQQHHHQHHQQQQLSSDENLPSQPSQDM 83
>SSB_BIFLO (Q8G757) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 218 Score = 30.8 bits (68), Expect = 4.0 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = -2 Query: 431 GFQGQSTQGGFREVQQPSQ-YGGLGYPSFYQ-SQNGMQQEHPQNPAEGSLNSSQNA-PSQ 261 GFQG+S GGF+ QQP+Q YG G Y Q G + A S S+ A PS Sbjct: 126 GFQGRS--GGFQGGQQPNQGYGNQGGQGGYAGGQGGYNGGYQGGGAGYSQQSAAPANPSA 183 Query: 260 PSHQMWQHS 234 P+ W ++ Sbjct: 184 PAVDPWSNA 192
>YCT9_YEAST (P25629) Hypothetical 16.0 kDa protein in ARE1-THR4 intergenic| region Length = 148 Score = 30.8 bits (68), Expect = 4.0 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%) Frame = +2 Query: 227 LSSCAATSGVMAETGHSGSCSSFPRQGSAGA-PVAYHSATGRSSDTQDHRIERAV 388 L C + A TG+S SCS FP SA +TG +SD D R E ++ Sbjct: 35 LFRCERYFCMWASTGYSSSCSCFPATRSASVDSTPSVDSTGSTSDVVDDRGETSM 89
>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor| Length = 660 Score = 30.8 bits (68), Expect = 4.0 Identities = 33/106 (31%), Positives = 42/106 (39%), Gaps = 4/106 (3%) Frame = -2 Query: 563 EALSSQFKEANHYMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGF-REVQ 387 E Q ++ + +LQQ G G S PG QGQ QG + +Q Sbjct: 417 EQQPGQGQQGYYPTSLQQPGQGQQQGQGQQGYYPTSLQQPG-----QGQ--QGHYPASLQ 469 Query: 386 QPSQYGGLGYPSFYQSQNGMQQEHP---QNPAEGSLNSSQNAPSQP 258 QP Q G G P Q Q Q +HP Q P +G +P QP Sbjct: 470 QPGQ--GQGQPG--QRQQPGQGQHPEQGQQPGQGQQGYYPTSPQQP 511
>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4 intergenic| region Length = 738 Score = 30.8 bits (68), Expect = 4.0 Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 17/97 (17%) Frame = -2 Query: 479 AAGSRAVSAVPP-------GNFYGFQGQSTQGGFREVQQPSQYGGLG-YP--------SF 348 AA S A + P G+F + Q F Q QYG G YP ++ Sbjct: 578 AAASPATAHAQPQQQQPYGGSFMPYYAHFYQQSFPYGQP--QYGVAGQYPYQLPKNNYNY 635 Query: 347 YQSQNGMQQEHP-QNPAEGSLNSSQNAPSQPSHQMWQ 240 YQ+QNG +Q+ P Q A+ S +S Q Q Q Q Sbjct: 636 YQTQNGQEQQSPNQGVAQHSEDSQQKQSQQQQQQQPQ 672
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 30.4 bits (67), Expect = 5.2 Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 9/80 (11%) Frame = -2 Query: 473 GSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEHPQ----- 309 G R PG QGQ GG R+ Q+ Q G G + G PQ Sbjct: 224 GPRPGGGPRPGGGPRPQGQGRPGGQRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGPRP 283 Query: 308 ----NPAEGSLNSSQNAPSQ 261 P GS +Q APSQ Sbjct: 284 QGGSRPQGGSAQGAQGAPSQ 303
>GLT4_WHEAT (P08489) Glutenin, high molecular weight subunit PW212 precursor| Length = 838 Score = 30.4 bits (67), Expect = 5.2 Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Frame = -2 Query: 515 QQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFY--- 345 QQ G G + PG G QGQ G ++ QQP Q G P +Y Sbjct: 453 QQPGQLQQSAQGQKGQQPGQGQQPGQ--GQQGQQPGQG-QQGQQPGQ----GQPGYYPTS 505 Query: 344 --QSQNGMQQEHPQNPAEGSLNSSQNAPSQP 258 QS G Q Q P +G +P QP Sbjct: 506 PQQSGQGQQPGQWQQPGQGQPGYYPTSPLQP 536 Score = 29.6 bits (65), Expect = 8.8 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Frame = -2 Query: 446 PGNFYGFQGQSTQGGFREVQQPSQYG--GLGYPSFY--------QSQNGMQQEHPQNPAE 297 PG + QS QG QQP Q+ G G P +Y Q Q G PQ P + Sbjct: 499 PGYYPTSPQQSGQG-----QQPGQWQQPGQGQPGYYPTSPLQPGQGQPGYDPTSPQQPGQ 553 Query: 296 GSLNSSQNAPSQ 261 G P+Q Sbjct: 554 GQQPGQLQQPAQ 565
>ERF2_CANAL (O13354) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 715 Score = 30.4 bits (67), Expect = 5.2 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = -2 Query: 464 AVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEH 315 A S VP G + FQ F+ QQ QYG GY + Q Q G QQ + Sbjct: 33 AQSFVPQGGYQQFQQ------FQPQQQQQQYG--GYNQYNQYQGGYQQNY 74
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 30.4 bits (67), Expect = 5.2 Identities = 24/82 (29%), Positives = 30/82 (36%), Gaps = 6/82 (7%) Frame = -2 Query: 482 GAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQY---GGLGYPSFYQSQNGMQQEHP 312 G S S ++ GQ+ G+ P Y GG G QS G Q +P Sbjct: 40 GYGQSADTSGYGQSSYGSSYGQTQNTGYGTQSAPQGYGSTGGYGSSQSSQSSYGQQSSYP 99 Query: 311 ---QNPAEGSLNSSQNAPSQPS 255 Q PA S + S SQ S Sbjct: 100 GYGQQPAPSSTSGSYGGSSQSS 121
>SLC2B_HUMAN (Q8NEV8) Slp homolog lacking C2 domains b (Exophilin-5)| Length = 1989 Score = 30.4 bits (67), Expect = 5.2 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 5/116 (4%) Frame = -2 Query: 596 SASXATTMGIDEALSSQF-KEANHYMALQQSDNSAMWLHGAA---GSRAVSAVPPGNFYG 429 +A T+G + ++++ + + + L D + W + + G R+ ++ YG Sbjct: 1828 NALSRLTLGNEFSVNNGYSRRFRSFSELPSCDGNESWAYRSGTKTGPRSAISIYRPIDYG 1887 Query: 428 FQGQSTQGGFRE-VQQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLNSSQNAPS 264 G+ Q F E V++ G L PSF ++ G ++ +NP S + S N+PS Sbjct: 1888 IFGKEQQLAFLENVKRSLTQGRLWKPSFLKNP-GFLKDDLRNPPNPSESLSSNSPS 1942
>GLT5_WHEAT (P10388) Glutenin, high molecular weight subunit DX5 precursor| Length = 839 Score = 30.4 bits (67), Expect = 5.2 Identities = 28/91 (30%), Positives = 34/91 (37%), Gaps = 5/91 (5%) Frame = -2 Query: 515 QQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFY--- 345 QQ G G + PG G QGQ G ++ QQP Q G P +Y Sbjct: 448 QQPGQLQQSAQGQKGQQPGQGQQPGQ--GQQGQQPGQG-QQGQQPGQ----GQPGYYPTS 500 Query: 344 --QSQNGMQQEHPQNPAEGSLNSSQNAPSQP 258 QS G Q Q P +G +P QP Sbjct: 501 PQQSGQGQQPGQWQQPGQGQPGYYPTSPLQP 531 Score = 29.6 bits (65), Expect = 8.8 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Frame = -2 Query: 446 PGNFYGFQGQSTQGGFREVQQPSQYG--GLGYPSFY--------QSQNGMQQEHPQNPAE 297 PG + QS QG QQP Q+ G G P +Y Q Q G PQ P + Sbjct: 494 PGYYPTSPQQSGQG-----QQPGQWQQPGQGQPGYYPTSPLQPGQGQPGYDPTSPQQPGQ 548 Query: 296 GSLNSSQNAPSQ 261 G P+Q Sbjct: 549 GQQPGQLQQPAQ 560
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 344 QSQNGMQQEHPQNPAEGSLNSSQNAPSQPSHQMWQHSY 231 Q+Q+ QQ+ PQ PA +L+ P S Q Q +Y Sbjct: 555 QAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAY 592
>LEG3_CANFA (P38486) Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)| (IgE-binding protein) (35 kDa lectin) (Carbohydrate-binding protein 35) (CBP 35) (Laminin-binding protein) (Lectin L-29) Length = 295 Score = 30.0 bits (66), Expect = 6.7 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 3/75 (4%) Frame = -2 Query: 449 PPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFYQSQ---NGMQQEHPQNPAEGSLNSS 279 PPG G+ GQ+ GG+ P Y G P Y Q G + P G + Sbjct: 58 PPG---GYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGGYPGQAPPGTYPGPTAPA 114 Query: 278 QNAPSQPSHQMWQHS 234 P+ P Q Q S Sbjct: 115 YPGPTAPGTQPGQPS 129
>KCNH8_MOUSE (P59111) Potassium voltage-gated channel subfamily H member 8| (Voltage-gated potassium channel subunit Kv12.1) (Ether-a-go-go-like potassium channel 3) (ELK channel 3) (ELK3) (Fragment) Length = 876 Score = 30.0 bits (66), Expect = 6.7 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -2 Query: 356 PSFYQSQNGMQQEHPQNPAEGSLNSSQNAPSQPSH 252 PS S + H QNPA+ L+ S N PSH Sbjct: 732 PSLVGSSPQRTEAHEQNPADSELHHSPNLDYSPSH 766
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 29.6 bits (65), Expect = 8.8 Identities = 28/112 (25%), Positives = 51/112 (45%) Frame = -2 Query: 602 NQSASXATTMGIDEALSSQFKEANHYMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQ 423 + S+S ++++ + + SS ++ ++Q S +S+ ++ S +V A Sbjct: 610 SSSSSSSSSVPVSSSSSSSIIPSSSSSSIQPSSSSSSMPSSSSSSSSVVAS--------S 661 Query: 422 GQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLNSSQNAP 267 S GG R + YG L YP +Q+G E+ Q+ S S+Q AP Sbjct: 662 SSSVSGGLR----CNWYGTL-YPLCVTTQSGWGWENSQSCISASTCSAQPAP 708
>TCF20_MOUSE (Q9EPQ8) Transcription factor 20 (Stromelysin 1 PDGF-responsive| element-binding protein) (SPRE-binding protein) (Nuclear factor SPBP) Length = 1983 Score = 29.6 bits (65), Expect = 8.8 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = -2 Query: 452 VPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSFYQSQNGMQQEHPQNPAEGSLNSSQN 273 +PPGN G Q Q Q ++ QQP Q Q Q QQ+HP N++ Sbjct: 317 IPPGNQQGQQQQQQQPQPQQ-QQPQQ----------QQQQQQQQQHPPQRVMQYTNAATK 365 Query: 272 APSQ 261 P Q Sbjct: 366 IPLQ 369
>ANDR_PANTR (O97775) Androgen receptor (Dihydrotestosterone receptor)| Length = 911 Score = 29.6 bits (65), Expect = 8.8 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 4/94 (4%) Frame = -2 Query: 527 YMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSF 348 + L QS + G A SA PPG Q Q Q ++ QQ Q S Sbjct: 23 FQNLFQSVREVIQNPGPRHPEAASAAPPGASLLLQQQQQQQQQQQQQQQQQQQQQQETSP 82 Query: 347 YQSQ----NGMQQEHPQNPAEGSLNSSQNAPSQP 258 Q Q +G Q H + P + + PSQP Sbjct: 83 RQQQQQGEDGSPQAHRRGPTGYLVLDEEQQPSQP 116
>ANDR_MACMU (Q6QT55) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.6 bits (65), Expect = 8.8 Identities = 25/90 (27%), Positives = 32/90 (35%) Frame = -2 Query: 527 YMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSF 348 + L QS + G A SA PPG Q Q Q QQ Q G Sbjct: 23 FQNLFQSVREVIQNPGPRHPEAASAAPPGASLQQQQQQQQETSPRQQQQQQQG------- 75 Query: 347 YQSQNGMQQEHPQNPAEGSLNSSQNAPSQP 258 ++G Q H + P + + PSQP Sbjct: 76 ---EDGSPQAHRRGPTGYLVLDEEQQPSQP 102
>ANDR_MACFA (O97952) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.6 bits (65), Expect = 8.8 Identities = 25/90 (27%), Positives = 32/90 (35%) Frame = -2 Query: 527 YMALQQSDNSAMWLHGAAGSRAVSAVPPGNFYGFQGQSTQGGFREVQQPSQYGGLGYPSF 348 + L QS + G A SA PPG Q Q Q QQ Q G Sbjct: 23 FQNLFQSVREVIQNPGPRHPEAASAAPPGASLQQQQQQQQETSPRQQQQQQQG------- 75 Query: 347 YQSQNGMQQEHPQNPAEGSLNSSQNAPSQP 258 ++G Q H + P + + PSQP Sbjct: 76 ---EDGSPQAHRRGPTGYLVLDEEQQPSQP 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 86,847,570 Number of Sequences: 219361 Number of extensions: 1730769 Number of successful extensions: 5573 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 5168 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5544 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
