Clone Name	rbags19b24
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full...	200	1e-48
2	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	54	1e-04
3	gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare str...	54	1e-04
4	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	54	1e-04
5	dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	1e-04
6	dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clon...	54	1e-04
7	gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome	44	0.14
8	gb|AY705206.1| Pogonia ophioglossoides PsbC-like (psbC) gene, pa...	40	2.1
9	gb|AY705205.1| Pogonia japonica PsbC-like (psbC) gene, partial s...	40	2.1
10	gb|AY705204.1| Pogonia minor PsbC-like (psbC) gene, partial sequ...	40	2.1
11	gb|AY705202.1| Cleistes sp. Thomas 12975 PsbC-like (psbC) gene, ...	40	2.1
12	gb|AY705201.1| Cleistes sp. Chase O-430 PsbC (psbC) gene, partia...	40	2.1
13	gb|AY705200.1| Cleistes sp. Jardim 2579 PsbC (psbC) gene, partia...	40	2.1
14	gb|AY705199.1| Cleistes cipoana PsbC (psbC) gene, partial cds; c...	40	2.1
15	gb|AY705198.1| Cleistes divaricata PsbC (psbC) gene, partial cds...	40	2.1
16	gb|AY705197.1| Isotria verticillata PsbC-like (psbC) gene, parti...	40	2.1
17	gb|AY705196.1| Isotria medeoloides PsbC (psbC) gene, partial cds...	40	2.1
18	gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, co...	40	2.1
19	dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, ...	40	2.1
20	dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, c...	40	2.1
21	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	40	2.1
22	gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y...	40	2.1
23	gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isofo...	40	2.1
24	gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome	38	8.4
25	gb|BC077969.1| Xenopus laevis MGC81000 protein, mRNA (cDNA clone...	38	8.4
26	gb|AY147641.1| Burmannia capitata photosystem II D2 protein (psb...	38	8.4
27	gb|AF528919.1| Agathis robusta photosystem II D2 protein (psbD) ...	38	8.4
28	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	38	8.4
29	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	38	8.4
30	gb|AC124774.4| Mus musculus BAC clone RP23-49E5 from 15, complet...	38	8.4
31	gb|AC116584.2| Mus musculus BAC clone RP23-353J13 from 15, compl...	38	8.4
32	ref|XM_536688.2| PREDICTED: Canis familiaris similar to Ubiquiti...	38	8.4
33	ref|XM_847227.1| PREDICTED: Canis familiaris similar to Ubiquiti...	38	8.4
34	ref|XM_860367.1| PREDICTED: Canis familiaris similar to Ubiquiti...	38	8.4
35	gb|AY865171.1| Lactuca sativa chloroplast inversion region	38	8.4
36	emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro...	38	8.4
37	emb|AL031683.2|HS881E24 Human DNA sequence from clone RP5-881E24...	38	8.4
38	gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosom...	38	8.4
39	emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chro...	38	8.4
40	gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, comple...	38	8.4
41	gb|AC093840.4| Homo sapiens BAC clone RP11-433O3 from 4, complet...	38	8.4
42	emb|X14106.1|CHHVPSBC Hordeum vulgare chloroplast psbC gene for ...	38	8.4
43	emb|X13366.1|CHSCPSBD Secale cereale chloroplast psbD, psbC and ...	38	8.4
44	gb|AY165557.1| Drosophila novamexicana pros28.1B gene, exons 1, ...	38	8.4
45	gb|AY165532.1| Drosophila americana pros28.1B gene, exons 1,2, a...	38	8.4
46	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	38	8.4
47	gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosom...	38	8.4
48	gb|AF239794.1| Spathiphyllum wallisii photosystem II D2 protein ...	38	8.4
49	dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic D...	38	8.4
50	dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic D...	38	8.4
51	emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chr...	38	8.4
52	gb|AY108579.1| Zea mays PCO102927 mRNA sequence	38	8.4
53	emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) ...	38	8.4
54	dbj|AK112657.1| Ciona intestinalis cDNA, clone:cieg024j18, full ...	38	8.4
55	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	38	8.4
56	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	38	8.4
57	gb|AC168058.4| Mus musculus BAC clone RP24-134D11 from chromosom...	38	8.4
58	emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chrom...	38	8.4

---

>gb|BT009629.1| Triticum aestivum clone wre1n.pk168.h11:fis, full insert mRNA
            sequence
          Length = 1391

 Score =  200 bits (101), Expect = 1e-48
 Identities = 121/128 (94%)
 Strand = Plus / Minus

                                                                        
Query: 45   cacgtccgtcgaatttgcctaccattattgacagctntgtgggtttgcaaaaggaagaca 104
            |||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 1214 cacgtcagtcaaatttgcctaccattattgacagctttgtgggtttgcaaaaggaagaga 1155

                                                                        
Query: 105  ggggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgagcgtgg 164
             |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1154 agggcaaggaaaacgaagactcaaaaaattcctccacttcggcacataatatgtgcgtgg 1095

                    
Query: 165  atgaggcc 172
            ||| ||||
Sbjct: 1094 atgtggcc 1087



 Score = 50.1 bits (25), Expect = 0.002
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 7    atggaaaagtatcgtgacanttcatcatcatcataaaaca 46
            ||||||||||||| ||||  |||||||||||| |||||||
Sbjct: 1276 atggaaaagtatcatgacgattcatcatcatcgtaaaaca 1237

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 45      cacgtccgtcgaatttgcctaccattattgacagctntgtgggttt 90
               |||||| || ||||||||||| |||||||||||||| ||| |||||
Sbjct: 5842890 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842845

---

>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0021B21, from chromosome 3, complete sequence
          Length = 139208

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 45    cacgtccgtcgaatttgcctaccattattgacagctntgtgggttt 90
             |||||| || ||||||||||| |||||||||||||| ||| |||||
Sbjct: 71720 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 71675

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 45      cacgtccgtcgaatttgcctaccattattgacagctntgtgggttt 90
               |||||| || ||||||||||| |||||||||||||| ||| |||||
Sbjct: 5842103 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 5842058

---

>dbj|AK120113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025E12, full
            insert sequence
          Length = 2166

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 45   cacgtccgtcgaatttgcctaccattattgacagctntgtgggttt 90
            |||||| || ||||||||||| |||||||||||||| ||| |||||
Sbjct: 1964 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1919

---

>dbj|AK060718.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E10, full
            insert sequence
          Length = 1410

 Score = 54.0 bits (27), Expect = 1e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 45   cacgtccgtcgaatttgcctaccattattgacagctntgtgggttt 90
            |||||| || ||||||||||| |||||||||||||| ||| |||||
Sbjct: 1206 cacgtcagttgaatttgcctatcattattgacagctttgttggttt 1161

---

>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome
          Length = 3179300

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 99      aagacaggggcaaggaaaacga 120
               ||||||||||||||||||||||
Sbjct: 1831617 aagacaggggcaaggaaaacga 1831596

---

>gb|AY705206.1| Pogonia ophioglossoides PsbC-like (psbC) gene, partial sequence;
           chloroplast
          Length = 1441

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705205.1| Pogonia japonica PsbC-like (psbC) gene, partial sequence;
           chloroplast
          Length = 1441

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705204.1| Pogonia minor PsbC-like (psbC) gene, partial sequence; chloroplast
          Length = 1441

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705202.1| Cleistes sp. Thomas 12975 PsbC-like (psbC) gene, partial sequence;
           chloroplast
          Length = 1441

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705201.1| Cleistes sp. Chase O-430 PsbC (psbC) gene, partial cds; chloroplast
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705200.1| Cleistes sp. Jardim 2579 PsbC (psbC) gene, partial cds; chloroplast
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705199.1| Cleistes cipoana PsbC (psbC) gene, partial cds; chloroplast
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705198.1| Cleistes divaricata PsbC (psbC) gene, partial cds; chloroplast
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AY705197.1| Isotria verticillata PsbC-like (psbC) gene, partial sequence;
           chloroplast
          Length = 1436

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 523 caaagtatggaaaagtatcg 504

---

>gb|AY705196.1| Isotria medeoloides PsbC (psbC) gene, partial cds; chloroplast
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   caaagtatggaaaagtatcg 20
           ||||||||||||||||||||
Sbjct: 527 caaagtatggaaaagtatcg 508

---

>gb|AC146174.2| Pan troglodytes BAC clone CH251-549F12 from Y, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    caaggaaaacgaagactcaaaaaa 132
              |||||||||| |||||||||||||
Sbjct: 115036 caaggaaaacaaagactcaaaaaa 115059

---

>dbj|BS000614.1| Pan troglodytes chromosome Y clone:PTBY-009K01, complete sequences
          Length = 63466

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   caaggaaaacgaagactcaaaaaa 132
             |||||||||| |||||||||||||
Sbjct: 39928 caaggaaaacaaagactcaaaaaa 39905

---

>dbj|BS000556.1| Pan troglodytes chromosome Y clone:PTB-461C11, complete sequences
          Length = 148964

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    caaggaaaacgaagactcaaaaaa 132
              |||||||||| |||||||||||||
Sbjct: 134564 caaggaaaacaaagactcaaaaaa 134541

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 109      caaggaaaacgaagactcaaaaaa 132
                |||||||||| |||||||||||||
Sbjct: 23749871 caaggaaaacaaagactcaaaaaa 23749894

---

>gb|AC006040.3|AC006040 Homo sapiens BAC clone RP11-400O10 from Y, complete sequence
          Length = 186504

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 109    caaggaaaacgaagactcaaaaaa 132
              |||||||||| |||||||||||||
Sbjct: 121897 caaggaaaacaaagactcaaaaaa 121874

---

>gb|AF041427.1|AF041427 Homo sapiens ribosomal protein s4 Y isoform gene, complete cds
          Length = 45859

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 109   caaggaaaacgaagactcaaaaaa 132
             |||||||||| |||||||||||||
Sbjct: 24173 caaggaaaacaaagactcaaaaaa 24150

---

>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     gcaaaaggaagacaggggc 109
              |||||||||||||||||||
Sbjct: 476411 gcaaaaggaagacaggggc 476429

---

>gb|BC077969.1| Xenopus laevis MGC81000 protein, mRNA (cDNA clone MGC:81000
            IMAGE:5543149), complete cds
          Length = 2392

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 28   tcatcatcatcataaaaca 46
            |||||||||||||||||||
Sbjct: 2106 tcatcatcatcataaaaca 2088

---

>gb|AY147641.1| Burmannia capitata photosystem II D2 protein (psbD) and photosystem
            II CP43 protein (psbC) genes, partial cds; chloroplast
            genes for chloroplast products
          Length = 2178

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    caaagtatggaaaagtatc 19
            |||||||||||||||||||
Sbjct: 1266 caaagtatggaaaagtatc 1248

---

>gb|AF528919.1| Agathis robusta photosystem II D2 protein (psbD) and photosystem II
            cp43 protein (psbC) genes, partial cds; chloroplast
          Length = 2222

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    caaagtatggaaaagtatc 19
            |||||||||||||||||||
Sbjct: 1266 caaagtatggaaaagtatc 1248

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 33802 caaagtatggaaaagtatc 33784

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 33841 caaagtatggaaaagtatc 33823

---

>gb|AC124774.4| Mus musculus BAC clone RP23-49E5 from 15, complete sequence
          Length = 227514

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tcatcatcatcataaaaca 46
              |||||||||||||||||||
Sbjct: 164353 tcatcatcatcataaaaca 164371

---

>gb|AC116584.2| Mus musculus BAC clone RP23-353J13 from 15, complete sequence
          Length = 220203

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tcatcatcatcataaaaca 46
              |||||||||||||||||||
Sbjct: 158564 tcatcatcatcataaaaca 158546

---

>ref|XM_536688.2| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
            hydrolase 1 (Ubiquitin thiolesterase 1)
            (Ubiquitin-specific processing protease 1)
            (Deubiquitinating enzyme 1) (hUBP), transcript variant 1
            (LOC479549), mRNA
          Length = 3333

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 21   tgacanttcatcatcatcataa 42
            ||||| ||||||||||||||||
Sbjct: 2179 tgacacttcatcatcatcataa 2158

---

>ref|XM_847227.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
            hydrolase 1 (Ubiquitin thiolesterase 1)
            (Ubiquitin-specific processing protease 1)
            (Deubiquitinating enzyme 1) (hUBP), transcript variant 2
            (LOC479549), mRNA
          Length = 3351

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 21   tgacanttcatcatcatcataa 42
            ||||| ||||||||||||||||
Sbjct: 2197 tgacacttcatcatcatcataa 2176

---

>ref|XM_860367.1| PREDICTED: Canis familiaris similar to Ubiquitin carboxyl-terminal
            hydrolase 1 (Ubiquitin thiolesterase 1)
            (Ubiquitin-specific processing protease 1)
            (Deubiquitinating enzyme 1) (hUBP), transcript variant 4
            (LOC479549), mRNA
          Length = 3184

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 21   tgacanttcatcatcatcataa 42
            ||||| ||||||||||||||||
Sbjct: 2006 tgacacttcatcatcatcataa 1985

---

>gb|AY865171.1| Lactuca sativa chloroplast inversion region
          Length = 28722

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 27738 caaagtatggaaaagtatc 27720

---

>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 122    gactcaaaaaattcctcca 140
              |||||||||||||||||||
Sbjct: 107904 gactcaaaaaattcctcca 107922

---

>emb|AL031683.2|HS881E24 Human DNA sequence from clone RP5-881E24 on chromosome 20p12 Contains
              part of the PLCB1 gene for phospholipase C beta 1
              (phosphoinositide-specific), complete sequence
          Length = 115611

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      gtatggaaaagtatcgtga 23
              |||||||||||||||||||
Sbjct: 111163 gtatggaaaagtatcgtga 111145

---

>gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosome 10, complete
             sequence
          Length = 157670

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tcatcatcatcataaaaca 46
             |||||||||||||||||||
Sbjct: 29200 tcatcatcatcataaaaca 29182

---

>emb|AL646001.7| Mouse DNA sequence from clone RP23-10B17 on chromosome 11 Contains the
             5' end of a variant of the Odz2 gene for odd Oz/ten-m
             homolog 2 (Drosophila), complete sequence
          Length = 194171

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 90    tgcaaaaggaagacagggg 108
             |||||||||||||||||||
Sbjct: 62534 tgcaaaaggaagacagggg 62516

---

>gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, complete sequence
          Length = 181886

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 119    gaagactcaaaaaattcct 137
              |||||||||||||||||||
Sbjct: 151319 gaagactcaaaaaattcct 151301

---

>gb|AC093840.4| Homo sapiens BAC clone RP11-433O3 from 4, complete sequence
          Length = 173814

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     tttgcaaaaggaagacagg 106
              |||||||||||||||||||
Sbjct: 100040 tttgcaaaaggaagacagg 100058

---

>emb|X14106.1|CHHVPSBC Hordeum vulgare chloroplast psbC gene for chlorophyll a/b-binding
           protein of photosystem II core
          Length = 928

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 1   caaagtatggaaaagtatc 19
           |||||||||||||||||||
Sbjct: 337 caaagtatggaaaagtatc 319

---

>emb|X13366.1|CHSCPSBD Secale cereale chloroplast psbD, psbC and trnS genes for D2
            polypeptide, Chl a-binding protein and tRNA-Ser(uga)
          Length = 2992

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    caaagtatggaaaagtatc 19
            |||||||||||||||||||
Sbjct: 1642 caaagtatggaaaagtatc 1624

---

>gb|AY165557.1| Drosophila novamexicana pros28.1B gene, exons 1, 2, and 3 and
           partial cds
          Length = 771

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 93  aaaaggaagacaggggcaaggaa 115
           ||||||||||||| |||||||||
Sbjct: 562 aaaaggaagacagaggcaaggaa 584

---

>gb|AY165532.1| Drosophila americana pros28.1B gene, exons 1,2, and 3 and partial
           cds
          Length = 736

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 93  aaaaggaagacaggggcaaggaa 115
           ||||||||||||| |||||||||
Sbjct: 209 aaaaggaagacagaggcaaggaa 187

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 1        caaagtatggaaaagtatc 19
                |||||||||||||||||||
Sbjct: 19434629 caaagtatggaaaagtatc 19434611

---

>gb|AC154177.2| Mus musculus BAC clone RP23-465J20 from chromosome 17, complete sequence
          Length = 206481

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tcatcatcatcataaaaca 46
              |||||||||||||||||||
Sbjct: 145252 tcatcatcatcataaaaca 145234

---

>gb|AF239794.1| Spathiphyllum wallisii photosystem II D2 protein (psbD) and
            photosystem II CP43 protein (psbC) genes, partial cds;
            chloroplast genes for chloroplast products
          Length = 2184

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 1    caaagtatggaaaagtatc 19
            |||||||||||||||||||
Sbjct: 1266 caaagtatggaaaagtatc 1248

---

>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0476H10
          Length = 151703

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 52156 caaagtatggaaaagtatc 52138

---

>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0475F05
          Length = 147522

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      caaagtatggaaaagtatc 19
              |||||||||||||||||||
Sbjct: 120120 caaagtatggaaaagtatc 120102

---

>emb|AL732501.8| Mouse DNA sequence from clone RP23-325I22 on chromosome X, complete
              sequence
          Length = 206856

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tcatcatcatcataaaaca 46
              |||||||||||||||||||
Sbjct: 118987 tcatcatcatcataaaaca 118969

---

>gb|AY108579.1| Zea mays PCO102927 mRNA sequence
          Length = 2137

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 36/42 (85%)
 Strand = Plus / Minus

                                                      
Query: 45   cacgtccgtcgaatttgcctaccattattgacagctntgtgg 86
            |||||| ||||||  |||||| |||||||||||| | |||||
Sbjct: 1953 cacgtcagtcgaacctgcctatcattattgacagatttgtgg 1912

---

>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC
            transporter, exons 1-22
          Length = 15112

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 1    caaagtatggaaaagtatc 19
            |||||||||||||||||||
Sbjct: 5502 caaagtatggaaaagtatc 5520

---

>dbj|AK112657.1| Ciona intestinalis cDNA, clone:cieg024j18, full insert sequence
          Length = 1793

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  tgtgggtttgcaaaaggaa 100
           |||||||||||||||||||
Sbjct: 596 tgtgggtttgcaaaaggaa 614

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 33801 caaagtatggaaaagtatc 33783

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     caaagtatggaaaagtatc 19
             |||||||||||||||||||
Sbjct: 36326 caaagtatggaaaagtatc 36344

---

>gb|AC168058.4| Mus musculus BAC clone RP24-134D11 from chromosome 10, complete
             sequence
          Length = 199406

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tcatcatcatcataaaaca 46
             |||||||||||||||||||
Sbjct: 86493 tcatcatcatcataaaaca 86511

---

>emb|AL928804.5| Mouse DNA sequence from clone RP23-87G8 on chromosome 2, complete
              sequence
          Length = 127800

 Score = 38.2 bits (19), Expect = 8.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 119    gaagactcaaaaaattcct 137
              |||||||||||||||||||
Sbjct: 122770 gaagactcaaaaaattcct 122788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,671,686
Number of Sequences: 3902068
Number of extensions: 1671686
Number of successful extensions: 235755
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 235444
Number of HSP's gapped (non-prelim): 311
length of query: 172
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 150
effective length of database: 17,147,199,772
effective search space: 2572079965800
effective search space used: 2572079965800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)

---