Clone Name	rbags18m23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full ...	603	e-169
2	ref|XM_470089.1| Oryza sativa (japonica cultivar-group), mRNA	182	7e-43
3	dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clon...	182	7e-43
4	dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clon...	182	7e-43
5	dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clon...	182	7e-43
6	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	149	9e-33
7	gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom...	149	9e-33
8	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	149	9e-33
9	gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reduct...	143	6e-31
10	gb|AY109096.1| Zea mays PCO119715 mRNA sequence	143	6e-31
11	gb|BT019001.1| Zea mays clone Contig489.F mRNA sequence	62	2e-06
12	ref|XM_362588.1| Magnaporthe grisea 70-15 hypothetical protein (...	56	1e-04
13	gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr...	54	4e-04
14	ref|XM_568023.1| Cryptococcus neoformans var. neoformans JEC21 m...	54	4e-04
15	ref|XM_953671.1| Neurospora crassa OR74A hypothetical protein (N...	46	0.099
16	ref|XM_329903.1| Neurospora crassa OR74A hypothetical protein (N...	46	0.099
17	emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig...	46	0.099
18	ref|XM_535405.2| PREDICTED: Canis familiaris similar to Methylen...	44	0.39
19	dbj|AK058876.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.39
20	ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	42	1.5
21	ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	42	1.5
22	ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydr...	42	1.5
23	ref|XM_594291.2| PREDICTED: Bos taurus hypothetical LOC516149 (L...	42	1.5
24	gb|BC110162.1| Bos taurus hypothetical LOC516149, mRNA (cDNA clo...	42	1.5
25	gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydro...	42	1.5
26	gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydro...	42	1.5
27	emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, B...	42	1.5
28	gb|AF441241.2| Synthetic construct chimera1 mRNA, complete cds	42	1.5
29	emb|BX825865.1|CNS0A52W Arabidopsis thaliana Full-length cDNA Co...	42	1.5
30	gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrof...	42	1.5
31	gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete seq...	40	6.1
32	gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome...	40	6.1
33	ref|XM_500349.1| Yarrowia lipolytica CLIB122, YALI0B00572g predi...	40	6.1
34	emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on ch...	40	6.1
35	gb|CP000133.1| Rhizobium etli CFN 42, complete genome	40	6.1
36	gb|CP000264.1| Jannaschia sp. CCS1, complete genome	40	6.1
37	gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10...	40	6.1
38	gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome ...	40	6.1
39	gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cance...	40	6.1
40	gb|AC115003.18| Mus musculus chromosome 6, clone RP24-179P9, com...	40	6.1
41	emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1...	40	6.1

---

>gb|BT009403.1| Triticum aestivum clone wlm96.pk047.l4:fis, full insert mRNA sequence
          Length = 1653

 Score =  603 bits (304), Expect = e-169
 Identities = 421/460 (91%), Gaps = 9/460 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaaattcttattntattgagtggnttggataaatcgacacaaatcacgacagatcgtatt 60
            ||||||||||||  || |||||| ||||||||||||||| ||||||||||| ||| ||||
Sbjct: 1521 aaaattcttattc-atagagtggtttggataaatcgacagaaatcacgacaaatcatatt 1463

                                                                        
Query: 61   acaggattctaacgaagggcggtcaaac-------act-taagatatcatcgaaattaga 112
            |||||| |||| ||||||||||||||||       ||| |||| | ||||||||||||||
Sbjct: 1462 acaggactctagcgaagggcggtcaaacgcagcatactgtaaggtctcatcgaaattaga 1403

                                                                        
Query: 113  tctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacca 172
            |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 1402 tctccttgaatgcagcaaagaggtccccgctgatgtagtcattgtccacgaggctgacca 1343

                                                                        
Query: 173  ggcaataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaaca 232
             | ||||| ||||||| | ||||||||||||||||||||  ||||| ||||| |||||||
Sbjct: 1342 agtaatagctcttctgaatctgctctagcaactccctggacgagtcgccctctgggaaca 1283

                                                                        
Query: 233  ggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctcg 292
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1282 ggcaggcccatcccctggaccagatctcaaacgcttcatctttccagaccatgaagctcg 1223

                                                                        
Query: 293  ccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgacag 352
            | |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1222 ctgagtcaacgacggtaggctggatgatctccttgccggggaacacaccccatgtgacag 1163

                                                                        
Query: 353  cgttcacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatgt 412
            | ||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1162 cattcacggcgttcgcagggatgtttgagatcgattccccttccttgttcacggcgatgt 1103

                                                    
Query: 413  atgtgagggaagggaatgccttgctcttctcgatgagttg 452
            | ||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 acgtgagggaagggaatgccttgctcttctcgatgagttg 1063

---

>ref|XM_470089.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2167

 Score =  182 bits (92), Expect = 7e-43
 Identities = 271/332 (81%)
 Strand = Plus / Minus

                                                                        
Query: 112  atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
            ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 1847 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 1788

                                                                        
Query: 172  aggcaataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaac 231
            | | | ||| ||||||| ||||  ||||| | |||||| | |||||| ||||| ||||||
Sbjct: 1787 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 1728

                                                                        
Query: 232  aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 291
            ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 1727 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 1668

                                                                        
Query: 292  gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 351
            || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 1667 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 1608

                                                                        
Query: 352  gcgttcacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatg 411
            || ||||| | ||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 1607 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 1548

                                            
Query: 412  tatgtgagggaagggaatgccttgctcttctc 443
            ||||| || |||||||||||||||||||||||
Sbjct: 1547 tatgtaagagaagggaatgccttgctcttctc 1516

---

>dbj|AK121351.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O06, full
            insert sequence
          Length = 2169

 Score =  182 bits (92), Expect = 7e-43
 Identities = 271/332 (81%)
 Strand = Plus / Minus

                                                                        
Query: 112  atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
            ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 1849 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 1790

                                                                        
Query: 172  aggcaataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaac 231
            | | | ||| ||||||| ||||  ||||| | |||||| | |||||| ||||| ||||||
Sbjct: 1789 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 1730

                                                                        
Query: 232  aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 291
            ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 1729 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 1670

                                                                        
Query: 292  gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 351
            || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 1669 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 1610

                                                                        
Query: 352  gcgttcacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatg 411
            || ||||| | ||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 1609 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 1550

                                            
Query: 412  tatgtgagggaagggaatgccttgctcttctc 443
            ||||| || |||||||||||||||||||||||
Sbjct: 1549 tatgtaagagaagggaatgccttgctcttctc 1518

---

>dbj|AK099527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031C07, full
           insert sequence
          Length = 1119

 Score =  182 bits (92), Expect = 7e-43
 Identities = 271/332 (81%)
 Strand = Plus / Minus

                                                                       
Query: 112 atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
           ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 909 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 850

                                                                       
Query: 172 aggcaataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaac 231
           | | | ||| ||||||| ||||  ||||| | |||||| | |||||| ||||| ||||||
Sbjct: 849 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 790

                                                                       
Query: 232 aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 291
           ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 789 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 730

                                                                       
Query: 292 gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 351
           || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 729 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 670

                                                                       
Query: 352 gcgttcacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatg 411
           || ||||| | ||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 669 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 610

                                           
Query: 412 tatgtgagggaagggaatgccttgctcttctc 443
           ||||| || |||||||||||||||||||||||
Sbjct: 609 tatgtaagagaagggaatgccttgctcttctc 578

---

>dbj|AK062082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F11, full
           insert sequence
          Length = 968

 Score =  182 bits (92), Expect = 7e-43
 Identities = 271/332 (81%)
 Strand = Plus / Minus

                                                                       
Query: 112 atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
           ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 763 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 704

                                                                       
Query: 172 aggcaataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaac 231
           | | | ||| ||||||| ||||  ||||| | |||||| | |||||| ||||| ||||||
Sbjct: 703 aagaagtagctcttctggaccttgtctagtatctccctagatgagtcgccctcagggaac 644

                                                                       
Query: 232 aggcaggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctc 291
           ||||| ||||| ||| | ||||| || || || ||||| |||||||||||||| ||||| 
Sbjct: 643 aggcaagcccaaccctttgaccaaatttcgaaagcttcgtctttccaaaccataaagctg 584

                                                                       
Query: 292 gccgagtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgaca 351
           || ||||||||||| || |||||||  || |||||||| ||||| || ||||| ||||| 
Sbjct: 583 gctgagtcaacgacagttggctggactatttccttgccagggaaaacaccccatgtgacc 524

                                                                       
Query: 352 gcgttcacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatg 411
           || ||||| | ||| |  || ||||||||||  || || || ||||||||||| || |||
Sbjct: 523 gcattcacagcgtttgtgggaatgtttgagaatgactctccgtccttgttcacggcaatg 464

                                           
Query: 412 tatgtgagggaagggaatgccttgctcttctc 443
           ||||| || |||||||||||||||||||||||
Sbjct: 463 tatgtaagagaagggaatgccttgctcttctc 432

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  149 bits (75), Expect = 9e-33
 Identities = 198/240 (82%)
 Strand = Plus / Plus

                                                                            
Query: 204      ctccctggntgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 263
                |||||| | |||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 33864681 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 33864740

                                                                            
Query: 264      cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 323
                 ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 33864741 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 33864800

                                                                            
Query: 324      cttgccggggaacacgccccaagtgacagcgttcacggngttcgnagggatgtttgagat 383
                |||||| ||||| || ||||| ||||| || ||||| | ||| |  || |||||||||| 
Sbjct: 33864801 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 33864860

                                                                            
Query: 384      cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 443
                 || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 33864861 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 33864920



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 112      atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
                ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 33864258 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 33864317

                                       
Query: 172      aggcaataggtcttctgcacctg 194
                | | | ||| ||||||| |||||
Sbjct: 33864318 aagaagtagctcttctggacctg 33864340

---

>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence,
            complete sequence
          Length = 159795

 Score =  149 bits (75), Expect = 9e-33
 Identities = 198/240 (82%)
 Strand = Plus / Minus

                                                                        
Query: 204  ctccctggntgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 263
            |||||| | |||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 8559 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 8500

                                                                        
Query: 264  cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 323
             ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 8499 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 8440

                                                                        
Query: 324  cttgccggggaacacgccccaagtgacagcgttcacggngttcgnagggatgtttgagat 383
            |||||| ||||| || ||||| ||||| || ||||| | ||| |  || |||||||||| 
Sbjct: 8439 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 8380

                                                                        
Query: 384  cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 443
             || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 8379 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 8320



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 112  atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
            ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 8982 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 8923

                                   
Query: 172  aggcaataggtcttctgcacctg 194
            | | | ||| ||||||| |||||
Sbjct: 8922 aagaagtagctcttctggacctg 8900

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  149 bits (75), Expect = 9e-33
 Identities = 198/240 (82%)
 Strand = Plus / Plus

                                                                            
Query: 204      ctccctggntgagtcaccctccgggaacaggcaggcccatcccctggaccagatctcaaa 263
                |||||| | |||||| ||||| ||||||||||| ||||| ||| | ||||| || || ||
Sbjct: 33955153 ctccctagatgagtcgccctcagggaacaggcaagcccaaccctttgaccaaatttcgaa 33955212

                                                                            
Query: 264      cgcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctc 323
                 ||||| |||||||||||||| ||||| || ||||||||||| || |||||||  || ||
Sbjct: 33955213 agcttcgtctttccaaaccataaagctggctgagtcaacgacagttggctggactatttc 33955272

                                                                            
Query: 324      cttgccggggaacacgccccaagtgacagcgttcacggngttcgnagggatgtttgagat 383
                |||||| ||||| || ||||| ||||| || ||||| | ||| |  || |||||||||| 
Sbjct: 33955273 cttgccagggaaaacaccccatgtgaccgcattcacagcgtttgtgggaatgtttgagaa 33955332

                                                                            
Query: 384      cgattccccttccttgttcaccgcgatgtatgtgagggaagggaatgccttgctcttctc 443
                 || || || ||||||||||| || |||||||| || |||||||||||||||||||||||
Sbjct: 33955333 tgactctccgtccttgttcacggcaatgtatgtaagagaagggaatgccttgctcttctc 33955392



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 68/83 (81%)
 Strand = Plus / Plus

                                                                            
Query: 112      atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgacc 171
                ||||||||||| || || ||||| || ||| || ||||||| ||||||||||| || |||
Sbjct: 33954730 atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaagactaacc 33954789

                                       
Query: 172      aggcaataggtcttctgcacctg 194
                | | | ||| ||||||| |||||
Sbjct: 33954790 aagaagtagctcttctggacctg 33954812

---

>gb|AF174486.1|AF174486 Zea mays methylenetetrahydrofolate reductase mRNA, complete cds
          Length = 2225

 Score =  143 bits (72), Expect = 6e-31
 Identities = 269/336 (80%)
 Strand = Plus / Minus

                                                                        
Query: 117  cttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgaccaggca 176
            |||||| |||||||| ||||||||   |  |||||| ||||| || |||||||||||| |
Sbjct: 1852 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacgaggctgaccaggta 1793

                                                                        
Query: 177  ataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaacaggca 236
             ||||||||||| |||| |||||| | |||||| | ||| |||||||| ||||||| |||
Sbjct: 1792 gtaggtcttctgaaccttctctagtagctccctcgatgaatcaccctcagggaacatgca 1733

                                                                        
Query: 237  ggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctcgccga 296
              |||| ||||  | |||||| ||||| ||||| || ||||||||||| || || ||   
Sbjct: 1732 accccacccccgagtccagatttcaaatgcttcgtccttccaaaccataaaacttgcatg 1673

                                                                        
Query: 297  gtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgacagcgtt 356
             || || || ||||||||||| ||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1672 atccacaaccgtaggctggataatctccttgccagggaaaacaccccacgtgacagcatt 1613

                                                                        
Query: 357  cacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatgtatgt 416
            ||||| |||||  |  || || ||||  | ||| || ||||||||||| || ||||| ||
Sbjct: 1612 cacggcgttcggtgaaatattggagaatgtttctccatccttgttcacagcaatgtaagt 1553

                                                
Query: 417  gagggaagggaatgccttgctcttctcgatgagttg 452
            ||| ||||||||||| ||| ||||||| || |||||
Sbjct: 1552 gagagaagggaatgctttgatcttctcaattagttg 1517

---

>gb|AY109096.1| Zea mays PCO119715 mRNA sequence
          Length = 2423

 Score =  143 bits (72), Expect = 6e-31
 Identities = 269/336 (80%)
 Strand = Plus / Minus

                                                                        
Query: 117  cttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgaccaggca 176
            |||||| |||||||| ||||||||   |  |||||| ||||| || |||||||||||| |
Sbjct: 1835 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacgaggctgaccaggta 1776

                                                                        
Query: 177  ataggtcttctgcacctgctctagcaactccctggntgagtcaccctccgggaacaggca 236
             ||||||||||| |||| |||||| | |||||| | ||| |||||||| ||||||| |||
Sbjct: 1775 gtaggtcttctgaaccttctctagtagctccctcgatgaatcaccctcagggaacatgca 1716

                                                                        
Query: 237  ggcccatcccctggaccagatctcaaacgcttcatctttccaaaccatgaagctcgccga 296
              |||| ||||  | |||||| ||||| ||||| || ||||||||||| || || ||   
Sbjct: 1715 accccacccccgagtccagatttcaaatgcttcgtccttccaaaccataaaacttgcatg 1656

                                                                        
Query: 297  gtcaacgacggtaggctggatgatctccttgccggggaacacgccccaagtgacagcgtt 356
             || || || ||||||||||| ||||||||||| ||||| || ||||| |||||||| ||
Sbjct: 1655 atccacaaccgtaggctggataatctccttgccagggaaaacaccccacgtgacagcatt 1596

                                                                        
Query: 357  cacggngttcgnagggatgtttgagatcgattccccttccttgttcaccgcgatgtatgt 416
            ||||| |||||  |  || || ||||  | ||| || ||||||||||| || ||||| ||
Sbjct: 1595 cacggcgttcggtgaaatattggagaatgtttctccatccttgttcacagcaatgtaagt 1536

                                                
Query: 417  gagggaagggaatgccttgctcttctcgatgagttg 452
            ||| ||||||||||| ||| ||||||| || |||||
Sbjct: 1535 gagagaagggaatgctttgatcttctcaattagttg 1500

---

>gb|BT019001.1| Zea mays clone Contig489.F mRNA sequence
          Length = 509

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 117 cttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaaggctgaccaggca 176
           |||||| |||||||| ||||||||   |  |||||| ||||| ||||||||||||||| |
Sbjct: 407 cttgaaggcagcaaacaggtccccctggacgtagtcgttgtcaacaaggctgaccaggta 466

                                 
Query: 177 ataggtcttctgcacctgctct 198
            ||||||||||| |||| ||||
Sbjct: 467 gtaggtcttctgaaccttctct 488

---

>ref|XM_362588.1| Magnaporthe grisea 70-15 hypothetical protein (MG08171.4) partial
            mRNA
          Length = 2073

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 318  gatctccttgccggggaacacgccccaagtgacagcgttc 357
            |||||||||||| ||||| |||||||||||||| ||||||
Sbjct: 1866 gatctccttgccagggaaaacgccccaagtgacggcgttc 1827

---

>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
              sequence
          Length = 906719

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                 
Query: 322    tccttgccggggaacacgccccaagtgacagcgtt 356
              |||||||||||||| || |||||||||||||||||
Sbjct: 349895 tccttgccggggaagacaccccaagtgacagcgtt 349929

---

>ref|XM_568023.1| Cryptococcus neoformans var. neoformans JEC21
            methylenetetrahydrofolate reductase (NADPH) (CNL04820)
            partial mRNA
          Length = 2382

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 322  tccttgccggggaacacgccccaagtgacagcgtt 356
            |||||||||||||| || |||||||||||||||||
Sbjct: 1777 tccttgccggggaagacaccccaagtgacagcgtt 1743

---

>ref|XM_953671.1| Neurospora crassa OR74A hypothetical protein (NCU09545.1) partial
            mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 322  tccttgccggggaacacgcccca 344
            |||||||||||||||||||||||
Sbjct: 1835 tccttgccggggaacacgcccca 1813

---

>ref|XM_329903.1| Neurospora crassa OR74A hypothetical protein (NCU09545.1) partial
            mRNA
          Length = 2046

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 322  tccttgccggggaacacgcccca 344
            |||||||||||||||||||||||
Sbjct: 1835 tccttgccggggaacacgcccca 1813

---

>emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig B11E5
          Length = 191196

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 322    tccttgccggggaacacgcccca 344
              |||||||||||||||||||||||
Sbjct: 122798 tccttgccggggaacacgcccca 122776

---

>ref|XM_535405.2| PREDICTED: Canis familiaris similar to Methylenetetrahydrofolate
            reductase (LOC478230), mRNA
          Length = 2343

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 70/86 (81%)
 Strand = Plus / Minus

                                                                        
Query: 265  gcttcatctttccaaaccatgaagctcgccgagtcaacgacggtaggctggatgatctcc 324
            |||||||| ||||| | |||||||||  | | ||| || || ||||||||||||||||||
Sbjct: 2135 gcttcatccttccagaacatgaagctgacagggtctaccaccgtaggctggatgatctcc 2076

                                      
Query: 325  ttgccggggaacacgccccaagtgac 350
               || ||||| | ||||||||||||
Sbjct: 2075 cgccccgggaagatgccccaagtgac 2050

---

>dbj|AK058876.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-G01, full
           insert sequence
          Length = 304

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 112 atctccttgaatgcagcaaagaggtccccgctgntgtagtcattgtccacaag 164
           ||||||||||| || || ||||| || ||| || ||||||| |||||||||||
Sbjct: 95  atctccttgaacgccgcgaagagatcaccgttgatgtagtcgttgtccacaag 43

---

>ref|NM_180393.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.2
            mRNA, complete cds
          Length = 1708

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1412 gaccaaatctcaaacgcttcgtctttcca 1384

---

>ref|NM_115860.2| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.3
            mRNA, complete cds
          Length = 2021

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1725 gaccaaatctcaaacgcttcgtctttcca 1697

---

>ref|NM_180392.1| Arabidopsis thaliana MTHFR1; methylenetetrahydrofolate reductase
            (NADPH) AT3G59970 (MTHFR1) transcript variant AT3G59970.1
            mRNA, complete cds
          Length = 2116

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1820 gaccaaatctcaaacgcttcgtctttcca 1792

---

>ref|XM_594291.2| PREDICTED: Bos taurus hypothetical LOC516149 (LOC516149), mRNA
          Length = 855

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 430 gccttgctcttctcgatgagt 450
           |||||||||||||||||||||
Sbjct: 338 gccttgctcttctcgatgagt 318

---

>gb|BC110162.1| Bos taurus hypothetical LOC516149, mRNA (cDNA clone MGC:134373
           IMAGE:8063959), complete cds
          Length = 907

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 430 gccttgctcttctcgatgagt 450
           |||||||||||||||||||||
Sbjct: 427 gccttgctcttctcgatgagt 407

---

>gb|AY122922.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
            MTHFR1 (At3g59970) mRNA, complete cds
          Length = 1810

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1643 gaccaaatctcaaacgcttcgtctttcca 1615

---

>gb|AY070034.1| Arabidopsis thaliana putative methylenetetrahydrofolate reductase
            MTHFR1 (At3g59970) mRNA, complete cds
          Length = 2002

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1725 gaccaaatctcaaacgcttcgtctttcca 1697

---

>emb|AL138647.1|ATF24G16 Arabidopsis thaliana DNA chromosome 3, BAC clone F24G16
          Length = 100906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 250   gaccagatctcaaacgcttcatctttcca 278
             ||||| |||||||||||||| ||||||||
Sbjct: 86925 gaccaaatctcaaacgcttcgtctttcca 86897

---

>gb|AF441241.2| Synthetic construct chimera1 mRNA, complete cds
          Length = 1785

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1649 gaccaaatctcaaacgcttcgtctttcca 1621

---

>emb|BX825865.1|CNS0A52W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL69ZD01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 485

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 250 gaccagatctcaaacgcttcatctttcca 278
           ||||| |||||||||||||| ||||||||
Sbjct: 191 gaccaaatctcaaacgcttcgtctttcca 163

---

>gb|AF181966.1|AF181966 Arabidopsis thaliana methylenetetrahydrofolate reductase MTHFR1 mRNA,
            complete cds
          Length = 1994

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 250  gaccagatctcaaacgcttcatctttcca 278
            ||||| |||||||||||||| ||||||||
Sbjct: 1705 gaccaaatctcaaacgcttcgtctttcca 1677

---

>gb|AC147818.2| Xenopus tropicalis clone CH216-10M9, complete sequence
          Length = 58071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 409   atgtatgtgagggaagggaa 428
             ||||||||||||||||||||
Sbjct: 56135 atgtatgtgagggaagggaa 56116

---

>gb|AC140347.3| Mus musculus BAC clone RP23-233K3 from chromosome 7, complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    tgtagtcattgtccacaagg 165
              ||||||||||||||||||||
Sbjct: 100253 tgtagtcattgtccacaagg 100234

---

>ref|XM_500349.1| Yarrowia lipolytica CLIB122, YALI0B00572g predicted mRNA
          Length = 1752

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 310  ggctggatgatctccttgccgggg 333
            |||||||||| |||||||||||||
Sbjct: 1550 ggctggatgacctccttgccgggg 1527

---

>emb|AL450267.10| Human DNA sequence from clone RP11-344B23 on chromosome 9 Contains the
             3' end of the PAX5 gene for paired box gene 5 (B-cell
             lineage specific activator protein) (BSAP), complete
             sequence
          Length = 125110

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 227   ggaacaggcaggcccatcccctgg 250
             |||| |||||||||||||||||||
Sbjct: 51971 ggaagaggcaggcccatcccctgg 51948

---

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 426     gaatgccttgctcttctcga 445
               ||||||||||||||||||||
Sbjct: 2736127 gaatgccttgctcttctcga 2736146

---

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 235     caggcccatcccctggaccagatc 258
               ||||||||||||| ||||||||||
Sbjct: 2852036 caggcccatcccccggaccagatc 2852059

---

>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     gacacaaatcacgacagatc 55
              ||||||||||||||||||||
Sbjct: 662759 gacacaaatcacgacagatc 662778

---

>gb|AC154911.4| Mus musculus BAC clone RP23-25I3 from chromosome 7, complete sequence
          Length = 228885

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    tgtagtcattgtccacaagg 165
              ||||||||||||||||||||
Sbjct: 205666 tgtagtcattgtccacaagg 205647

---

>gb|AC153616.8| Mus musculus 6 BAC RP23-328I7 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195332

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    cttctgcacctgctctagca 202
              ||||||||||||||||||||
Sbjct: 169133 cttctgcacctgctctagca 169114

---

>gb|AC115003.18| Mus musculus chromosome 6, clone RP24-179P9, complete sequence
          Length = 168290

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    cttctgcacctgctctagca 202
              ||||||||||||||||||||
Sbjct: 159242 cttctgcacctgctctagca 159261

---

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia
             lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 310   ggctggatgatctccttgccgggg 333
             |||||||||| |||||||||||||
Sbjct: 52211 ggctggatgacctccttgccgggg 52234


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,791,771
Number of Sequences: 3902068
Number of extensions: 2791771
Number of successful extensions: 53558
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53427
Number of HSP's gapped (non-prelim): 131
length of query: 452
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 430
effective length of database: 17,147,199,772
effective search space: 7373295901960
effective search space used: 7373295901960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---