ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags19b11 |
|---|---|
| Clone Library Name | barley_pub |
>YFC8_YEAST (P43569) Probable ATP-dependent transporter YFL028C| Length = 289 Score = 71.6 bits (174), Expect = 1e-12 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 23/114 (20%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL----- 359 DE+TVDLDV+ R LL+F K E E R ++VYATHIFDGL W + +++ G++ Sbjct: 173 DEVTVDLDVIARARLLEFLKWETETRRCSVVYATHIFDGLAKWPNQVYHMKSGKIVDNLD 232 Query: 358 -KRSAKYSDIEELK----------TAKNLLSVVES-------WLKSETKLPKKE 251 ++ ++S++ K K ++S V S WLK + ++P KE Sbjct: 233 YQKDVEFSEVVNAKVNGQVAFENDNNKVVISKVNSLHPLALEWLKRDNQIPDKE 286
>CBIO1_STRR6 (Q8DMY0) Cobalt import ATP-binding protein cbiO 1| Length = 279 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD + R +L+ FK+ Q TIV TH+ D + +A + +++G L + K Sbjct: 170 DEPTAGLDPLGRKELMTLFKK-LHQSGMTIVLVTHLMDDVAEYANQVYVMEKGRLVKGGK 228 Query: 343 YSDI 332 SD+ Sbjct: 229 PSDV 232
>CBIO1_STRPN (Q97N51) Cobalt import ATP-binding protein cbiO 1| Length = 279 Score = 41.6 bits (96), Expect = 0.001 Identities = 22/64 (34%), Positives = 35/64 (54%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD + R +L+ FK+ Q TIV TH+ D + +A + +++G L + K Sbjct: 170 DEPTAGLDPLGRKELMTLFKK-LHQSGMTIVLVTHLMDDVAEYANQVYVMEKGRLVKGGK 228 Query: 343 YSDI 332 SD+ Sbjct: 229 PSDV 232
>NIKD_BRUSU (Q8FVM9) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 262 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLD+V ++ +L+ ++ E+R+ I+ TH + A D+A + G L A Sbjct: 173 DEPTTDLDLVVQLRVLELLEKLVEERDLGILLVTHDMGVVARLAHDVAVLDHGRLIEQAP 232 Query: 343 YSDI 332 DI Sbjct: 233 VMDI 236
>NIKD_BRUME (Q8YCN8) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 262 Score = 40.0 bits (92), Expect = 0.004 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLD+V ++ +L+ ++ E+R+ I+ TH + A D+A + G L A Sbjct: 173 DEPTTDLDLVVQLRVLELLEKLVEERDLGILLVTHDMGVVARLAHDVAVLDHGRLIEQAP 232 Query: 343 YSDI 332 DI Sbjct: 233 VMDI 236
>METN_VIBCH (Q9KTJ5) Probable D-methionine transport ATP-binding protein metN| Length = 344 Score = 39.7 bits (91), Expect = 0.005 Identities = 30/101 (29%), Positives = 42/101 (41%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ KE Q TI+ TH D +++ ++A I GEL Sbjct: 165 DEATSALDPATTQSILELLKEINRQLNLTILLITHEMDVVKSICHEVAIIGGGELVEKGT 224 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVETQPRR 221 DI A + +++S L E V QP R Sbjct: 225 VGDI----FAHPKTELAHQFIRSTLDLSIPEDYQVRLQPTR 261
>Y334_MYCPN (P75444) Hypothetical ABC transporter ATP-binding protein MPN334| (F10_orf326) Length = 326 Score = 38.5 bits (88), Expect = 0.011 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 4/102 (3%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T +LD TR + +D E + + + ++HI LE + + I EGE+ + K Sbjct: 163 DEPTANLDPKTRNEFMDVCYELNVRNKMAVFVSSHILAELENYCDSLTVIHEGEILFNGK 222 Query: 343 YSDIEE----LKTAKNLLSVVESWLKSETKLPKKEPALVETQ 230 +I + + N + WLK++ K PA + Q Sbjct: 223 TKNIAKDNFGYRLKVNNSDSLRKWLKAQKIAYKYFPATDDFQ 264
>CBIO2_LACPL (Q88XV1) Cobalt import ATP-binding protein cbiO 2| Length = 295 Score = 38.5 bits (88), Expect = 0.011 Identities = 17/64 (26%), Positives = 34/64 (53%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R+D+++ F +R+ T+V TH D + +A ++ + G++ ++ Sbjct: 170 DEPTAGLDPQGRLDMMEMFARLRHERDLTVVLVTHQMDDVANYADNVIVMDRGQIVKTGT 229 Query: 343 YSDI 332 +I Sbjct: 230 PREI 233
>CBIO2_ENTFA (Q839D4) Cobalt import ATP-binding protein cbiO 2| Length = 289 Score = 38.1 bits (87), Expect = 0.015 Identities = 16/64 (25%), Positives = 34/64 (53%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R ++++ F ++ TIV TH+ D + +A + +++G++ R+ Sbjct: 170 DEPTAGLDPKGRKEMMEMFSRLHKEHNMTIVLVTHLMDDVANYADHVIVLEKGQIVRAGA 229 Query: 343 YSDI 332 ++ Sbjct: 230 PQEV 233
>CBIO1_STRMU (Q8DRS0) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 35.0 bits (79), Expect = 0.12 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FKE Q TIV TH+ D + +A + +++G + S Sbjct: 170 DEPTAGLDPKGRRELMTLFKE-LHQGGMTIVLVTHLMDDVSNYADWVYVLEKGRIVLSGS 228 Query: 343 ----YSDIEELKT 317 + +IE L++ Sbjct: 229 PKSVFQEIEFLES 241
>NIKD_SHIFL (Q83J78) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 254 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLDVV + +LD + +++ ++ TH + A D+A + +G++ + Sbjct: 165 DEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGKI---VE 221 Query: 343 YSDIEELKTA 314 D+E L A Sbjct: 222 QGDVETLFNA 231
>NIKD_ECOLI (P33593) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 254 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLDVV + +LD + +++ ++ TH + A D+A + +G++ + Sbjct: 165 DEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKI---VE 221 Query: 343 YSDIEELKTA 314 D+E L A Sbjct: 222 QGDVETLFNA 231
>NIKD_ECO57 (Q8X5U1) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 254 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLDVV + +LD + +++ ++ TH + A D+A + +G++ + Sbjct: 165 DEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKI---VE 221 Query: 343 YSDIEELKTA 314 D+E L A Sbjct: 222 QGDVETLFNA 231
>CBIO4_CLOAB (Q97JB8) Putative cobalt import ATP-binding protein cbiO 4| Length = 279 Score = 34.7 bits (78), Expect = 0.16 Identities = 19/55 (34%), Positives = 31/55 (56%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL 359 DE TV LD + L+ K+ E+ + TIV++TH D + +A + + EG+L Sbjct: 163 DEPTVSLDPRGTIKLVKLLKKINEEMKITIVFSTHDMDIVPLFADKVYVLNEGKL 217
>CBIO1_STRP8 (Q7CMM8) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 34.7 bits (78), Expect = 0.16 Identities = 28/96 (29%), Positives = 44/96 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK+ Q TIV TH+ D + +A + + +G++ S K Sbjct: 170 DEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYVLDKGKIILSGK 228 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVE 236 KT +S++E K+ K LV+ Sbjct: 229 ------PKTIFQQVSLLEKKQLGVPKVTKLAQRLVD 258
>CBIO1_STRP6 (Q5X9B6) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 34.7 bits (78), Expect = 0.16 Identities = 28/96 (29%), Positives = 44/96 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK+ Q TIV TH+ D + +A + + +G++ S K Sbjct: 170 DEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYVLDKGKIILSGK 228 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVE 236 KT +S++E K+ K LV+ Sbjct: 229 ------PKTIFQQVSLLEKKQLGVPKVTKLAQRLVD 258
>CBIO1_STRP3 (Q79VY7) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 34.7 bits (78), Expect = 0.16 Identities = 28/96 (29%), Positives = 44/96 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK+ Q TIV TH+ D + +A + + +G++ S K Sbjct: 170 DEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYVLDKGKIILSGK 228 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVE 236 KT +S++E K+ K LV+ Sbjct: 229 ------PKTIFQQVSLLEKKQLGVPKVTKLAQRLVD 258
>CBIO1_STRP1 (Q99XI2) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 34.7 bits (78), Expect = 0.16 Identities = 28/96 (29%), Positives = 44/96 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK+ Q TIV TH+ D + +A + + +G++ S K Sbjct: 170 DEPTAGLDPKGRKELMTIFKK-LHQSGMTIVLVTHLMDDVANYADFVYVLDKGKIILSGK 228 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVE 236 KT +S++E K+ K LV+ Sbjct: 229 ------PKTIFQQVSLLEKKQLGVPKVTKLAQRLVD 258
>CBIO2_LACLA (Q9CIS8) Cobalt import ATP-binding protein cbiO 2| Length = 288 Score = 34.3 bits (77), Expect = 0.21 Identities = 18/64 (28%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R++++ F E Q T+V TH+ D + +A + +++G + Sbjct: 169 DEPTAGLDPKARIEMMKLF-ESIHQTGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGT 227 Query: 343 YSDI 332 SD+ Sbjct: 228 PSDV 231
>MODC_VIBPA (Q87HN4) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 368 Score = 34.3 bits (77), Expect = 0.21 Identities = 16/64 (25%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD+ + +++ F +E ++ I+Y TH + A +A I +G++ S K Sbjct: 154 DEPLASLDMPRKREVMPFLEELSDKVNIPIIYVTHSLQEILRLAQHLAIIDKGQVTTSGK 213 Query: 343 YSDI 332 ++ Sbjct: 214 LEEV 217
>NIKD_ECOL6 (Q8FCN0) Nickel import ATP-binding protein nikD (EC 3.6.3.24)| Length = 254 Score = 33.9 bits (76), Expect = 0.28 Identities = 19/67 (28%), Positives = 34/67 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T DLDVV + +LD + +++ ++ TH + A D+A + G++ + Sbjct: 165 DEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSHGKI---VE 221 Query: 343 YSDIEEL 323 D+E L Sbjct: 222 QGDVETL 228
>CI066_HUMAN (Q5T8R8) Protein C9orf66| Length = 295 Score = 33.5 bits (75), Expect = 0.36 Identities = 27/67 (40%), Positives = 31/67 (46%) Frame = -2 Query: 479 PRLLQGRVRAERSHDRLRHPHIRRAGDMGDRHRVHPRG*AEKVSEILGHRRAQDGQEPAV 300 P+ +GRVRA S RLRHP RAG G R AE S G RRA G Sbjct: 191 PKSPRGRVRARSSDGRLRHP-AWRAGSGGRGGRGPS---AELASRYWGRRRALPGAADLR 246 Query: 299 GRGVMAE 279 +G A+ Sbjct: 247 PKGARAD 253
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 33.1 bits (74), Expect = 0.47 Identities = 30/70 (42%), Positives = 34/70 (48%), Gaps = 6/70 (8%) Frame = -2 Query: 497 RDQDGSPR---LLQGRVRAERSHDRLRHPHIRRAGDMGDRHR---VHPRG*AEKVSEILG 336 RDQDG+PR LL+ RV R R RH RRA + R R HPRG S+ Sbjct: 94 RDQDGAPRRRHLLRRRVGGHRG--RNRHAGDRRAPGVDSRLRQQHQHPRG--RHASD--- 146 Query: 335 HRRAQDGQEP 306 R QDG P Sbjct: 147 --RVQDGAHP 154
>YADG_ECOLI (P36879) Hypothetical ABC transporter ATP-binding protein yadG| Length = 308 Score = 33.1 bits (74), Expect = 0.47 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL-KRSA 347 DE T +D+ R + F K+ + TI+ TH + E +I IQ GEL + ++ Sbjct: 161 DEPTAGVDIELRRSMWGFLKD-LNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENTS 219 Query: 346 KYSDIEELKTAKNLLSVVESWLKSETKLPK 257 + + +LK+ +L L ++ LPK Sbjct: 220 MKALLAKLKSETFILD-----LAPKSPLPK 244
>METN_YERPE (Q8ZH38) D-methionine transport ATP-binding protein metN| Length = 343 Score = 33.1 bits (74), Expect = 0.47 Identities = 19/64 (29%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I EG+L Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISEGKLIEKDS 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>CBIO2_BACSU (P70970) Cobalt import ATP-binding protein cbiO 2| Length = 276 Score = 32.7 bits (73), Expect = 0.62 Identities = 16/64 (25%), Positives = 31/64 (48%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +++D F E ++ T + TH + +A ++ + +G ++ S Sbjct: 157 DEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSMEDAAAYADEMIVMHKGTIQASGS 216 Query: 343 YSDI 332 D+ Sbjct: 217 PRDL 220
>MODC_VIBVY (Q7ME63) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 368 Score = 32.7 bits (73), Expect = 0.62 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD+ + ++L F ++ E E IVY TH + A + + G++ S Sbjct: 155 DEPLASLDMPRKKEVLPFLEKLSESFEIPIVYVTHSLQEILRLADHLTVLDRGQIVASGV 214 Query: 343 YSDI 332 S++ Sbjct: 215 LSEV 218
>MODC_VIBVU (Q8D740) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 368 Score = 32.7 bits (73), Expect = 0.62 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD+ + ++L F ++ E E IVY TH + A + + G++ S Sbjct: 155 DEPLASLDMPRKKEVLPFLEKLSESFEIPIVYVTHSLQEILRLADHLTVLDRGQIVASGL 214 Query: 343 YSDI 332 S++ Sbjct: 215 LSEV 218
>CBIO_SYNEL (Q8DG84) Cobalt import ATP-binding protein cbiO| Length = 284 Score = 32.3 bits (72), Expect = 0.81 Identities = 22/64 (34%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R L + E+ Q+ TIV ATH D WA I + G++ S + Sbjct: 167 DEPTTYLDYQQRQQLRELL-EKIHQQGTTIVIATHDLDFAYGWADWIMILVNGQVSVSDR 225 Query: 343 YSDI 332 S + Sbjct: 226 ASHV 229
>CBIO1_STRA5 (Q8DWR4) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 32.3 bits (72), Expect = 0.81 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK ++ TIV TH+ D + +A + ++ G++ S + Sbjct: 170 DEPTAGLDPKGRKELMTLFKN-LHKKGMTIVLVTHLMDDVADYADYVYVLEAGKVTLSGQ 228 Query: 343 YSDI 332 I Sbjct: 229 PKQI 232
>CBIO1_STRA3 (Q8E2L3) Cobalt import ATP-binding protein cbiO 1| Length = 280 Score = 32.3 bits (72), Expect = 0.81 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD R +L+ FK ++ TIV TH+ D + +A + ++ G++ S + Sbjct: 170 DEPTAGLDPKGRKELMTLFKN-LHKKGMTIVLVTHLMDDVADYADYVYVLEAGKVTLSGQ 228 Query: 343 YSDI 332 I Sbjct: 229 PKQI 232
>CBIO5_METMA (Q8PVG9) Putative cobalt import ATP-binding protein cbiO 5| Length = 581 Score = 32.3 bits (72), Expect = 0.81 Identities = 19/64 (29%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T D V ++D+FK R +T+V+ TH + +AT I + EG++ + Sbjct: 469 DEPTTGQDRVNIEQMMDYFKT----RGSTLVFCTHDIEIAMLYATRILVMNEGQIIADGR 524 Query: 343 YSDI 332 D+ Sbjct: 525 GRDV 528
>YHCG_BACSU (P54591) Hypothetical ABC transporter ATP-binding protein yhcG| Length = 232 Score = 32.0 bits (71), Expect = 1.1 Identities = 22/87 (25%), Positives = 41/87 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD + R +++ + + +V ATH D +ET ++ + GE + Sbjct: 150 DEPFSGLDPMVRDSIVNSLVSYIDFEQQIVVIATHEIDEIETLLDEVIILANGEKVAQRE 209 Query: 343 YSDIEELKTAKNLLSVVESWLKSETKL 263 DI E + +SV++ W KS+ ++ Sbjct: 210 VEDIRE----QEGMSVLQ-WFKSKMEV 231
>OPPD_LACLC (P50980) Oligopeptide transport ATP-binding protein oppD| Length = 338 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + +LD E +++ A ++ TH + A +A + G+L A Sbjct: 181 DEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVEKAS 240 Query: 343 YSDIEELKTAKNLLSVVESWLKSET------KLPKKEPALVETQ 230 ++ + S++ S +ET +P P+L E + Sbjct: 241 VEELFQNPKHPYTRSLLRSNPSAETVSDDLYVIPGSVPSLSEIE 284
>OPPD_LACLA (Q07733) Oligopeptide transport ATP-binding protein oppD| Length = 338 Score = 32.0 bits (71), Expect = 1.1 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + +LD E +++ A ++ TH + A +A + G+L A Sbjct: 181 DEPTTALDVTIQAQILDLILEIQKKKNAGVILITHDLGVVAEVADTVAVMYAGQLVEKAS 240 Query: 343 YSDIEELKTAKNLLSVVESWLKSET------KLPKKEPALVETQ 230 ++ + S++ S +ET +P P+L E + Sbjct: 241 VEELFQNPKHPYTRSLLRSNPSAETVSDDLYVIPGSVPSLSEIE 284
>NOSF_PSEST (P19844) Copper transport ATP-binding protein nosF| Length = 308 Score = 32.0 bits (71), Expect = 1.1 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE TV LD + DL + QR +I+ +H+ G+E A + +G L+ Sbjct: 153 DEPTVGLDPIATQDLY-LLIDRLRQRGTSIILCSHVLPGVEAHINRAAILAKGCLQAVGS 211 Query: 343 YSDIE-----ELKTAKNLLSVVESWLKSET 269 S + ++ + +S +SWL+ T Sbjct: 212 LSQLRAEAGLPVRIRASGISERDSWLQRWT 241
>CBIO1_MYCPU (Q98QH5) Cobalt import ATP-binding protein cbiO 1| Length = 265 Score = 32.0 bits (71), Expect = 1.1 Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 2/98 (2%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYI-QEGELKRSA 347 DE+T LD + + +L+ K+ E+ T++ TH D E D + G+L S Sbjct: 161 DEVTSMLDPLGKHSILELIKDIQEKNSKTLISITHDMD--EAIQADYCLVFSAGKLVASG 218 Query: 346 KYSDIEELKTAKNLLSVVESWL-KSETKLPKKEPALVE 236 K +DI K L + ++ K KL EP E Sbjct: 219 KPADILNNKEIVELAKIDSPFIYKISQKLEGIEPTYDE 256
>AMIE_STRR6 (P0A2U9) Oligopeptide transport ATP-binding protein amiE| Length = 355 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + ++D K + T ++ TH + + A +A + GE+ + Sbjct: 184 DEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEI---VE 240 Query: 343 YSDIEEL 323 Y +EE+ Sbjct: 241 YGTVEEV 247
>AMIE_STRPN (P0A2U8) Oligopeptide transport ATP-binding protein amiE| Length = 355 Score = 32.0 bits (71), Expect = 1.1 Identities = 18/67 (26%), Positives = 32/67 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + ++D K + T ++ TH + + A +A + GE+ + Sbjct: 184 DEPTTALDVTIQAQIIDLLKSLQNEYHFTTIFITHDLGVVASIADKVAVMYAGEI---VE 240 Query: 343 YSDIEEL 323 Y +EE+ Sbjct: 241 YGTVEEV 247
>ABCA3_MOUSE (Q8R420) ATP-binding cassette sub-family A member 3| Length = 1704 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELK 356 DE T +D V+R + D +++ R T++ TH D + IA + +GEL+ Sbjct: 689 DEPTPGMDAVSRRAIWDLLQQQKSDR--TVLLTTHFMDEADLLGDRIAILAKGELQ 742
>ABCA3_HUMAN (Q99758) ATP-binding cassette sub-family A member 3 (ATP-binding| cassette transporter 3) (ATP-binding cassette 3) (ABC-C transporter) Length = 1704 Score = 31.6 bits (70), Expect = 1.4 Identities = 18/56 (32%), Positives = 28/56 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELK 356 DE T +D ++R + D + + R TIV TH D + IA + +GEL+ Sbjct: 689 DEPTSGMDAISRRAIWDLLQRQKSDR--TIVLTTHFMDEADLLGDRIAIMAKGELQ 742
>DPPD_BACSU (P26905) Dipeptide transport ATP-binding protein dppD| Length = 335 Score = 31.6 bits (70), Expect = 1.4 Identities = 17/64 (26%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + +L+ FKE + + +++ TH + A +A + G++ Sbjct: 180 DEPTTALDVTIQAQILELFKEIQRKTDVSVILITHDLGVVAQVADRVAVMYAGKMAEIGT 239 Query: 343 YSDI 332 DI Sbjct: 240 RKDI 243
>NATA_BACSU (P46903) ATP-binding transport protein natA (Na(+) ABC transporter)| Length = 246 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/73 (21%), Positives = 38/73 (52%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD+ T ++ F ++ ++ + TI++++HI + ++ + I GE+ Sbjct: 162 DEPTTGLDI-TSSNIFREFIQQLKREQKTILFSSHIMEEVQALCDSVIMIHSGEVIYRGA 220 Query: 343 YSDIEELKTAKNL 305 + E + +++L Sbjct: 221 LESLYESERSEDL 233
>TPM4_MOUSE (Q6IRU2) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 31.2 bits (69), Expect = 1.8 Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 9/100 (9%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIA---YIQEGELKR 353 DE + V+ + D +E+ E E + A HI D + ++A I EGELKR Sbjct: 84 DESERGMKVIENRAMKD--EEKMEILEMQLKEAKHITDEADRKYEEVARKLVILEGELKR 141 Query: 352 SAKYSDIEELKTA------KNLLSVVESWLKSETKLPKKE 251 + + +++ ELK KN+ + ++S + K +KE Sbjct: 142 AEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKE 181
>METN_SALTY (Q8ZRM9) D-methionine transport ATP-binding protein metN| Length = 343 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I GEL Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>METN_SALTI (Q8Z990) D-methionine transport ATP-binding protein metN| Length = 343 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I GEL Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>METN_ECOLI (P30750) D-methionine transport ATP-binding protein metN| Length = 343 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I GEL Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>METN_ECOL6 (P63355) D-methionine transport ATP-binding protein metN| Length = 343 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I GEL Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>METN_ECO57 (P63356) D-methionine transport ATP-binding protein metN| Length = 343 Score = 31.2 bits (69), Expect = 1.8 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T +L+ K+ + TI+ TH D ++ +A I GEL Sbjct: 165 DEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDT 224 Query: 343 YSDI 332 S++ Sbjct: 225 VSEV 228
>OPUBA_BACSU (Q45460) Choline transport ATP-binding protein opuBA| Length = 381 Score = 30.8 bits (68), Expect = 2.4 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD +TR L + FK+ + TIV+ TH D A I ++ GE+ + Sbjct: 160 DEPFGALDPITRDSLQEEFKKLQKTLHKTIVFVTHDMDEAIKLADRIVILKAGEIVQVGT 219 Query: 343 YSDI 332 DI Sbjct: 220 PDDI 223
>APPD_BACSU (P42064) Oligopeptide transport ATP-binding protein appD| Length = 328 Score = 30.4 bits (67), Expect = 3.1 Identities = 16/64 (25%), Positives = 31/64 (48%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + +L+ K+ C++ +I+ TH + A + + G++ +A Sbjct: 180 DEPTTALDVTIQAQVLELMKDLCQKFNTSILLITHDLGVVSEAADRVIVMYCGQVVENAT 239 Query: 343 YSDI 332 D+ Sbjct: 240 VDDL 243
>TPM4_RAT (P09495) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM-4)| Length = 247 Score = 30.4 bits (67), Expect = 3.1 Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 9/100 (9%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIA---YIQEGELKR 353 DE + V+ + D +E+ E +E + A HI + + ++A I EGEL+R Sbjct: 84 DESERGMKVIENRAMKD--EEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELER 141 Query: 352 SAKYSDIEELKTA------KNLLSVVESWLKSETKLPKKE 251 + + +++ ELK++ KN+ + ++S + K +KE Sbjct: 142 AEERAEVSELKSSDLEEELKNVTNNLKSLEAASEKYSEKE 181
>SRTF_STRPY (P0C0E2) Lantibiotic transport ATP-binding protein srtF| Length = 229 Score = 30.4 bits (67), Expect = 3.1 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD + +L + E + TI+ ++HI +E A I +I EG++ + Sbjct: 150 DEPTNGLDPIGIQELREII-ESFKSEGMTIMISSHILSEVEHLADFIGFIYEGKIILEKE 208 Query: 343 YSDIEELKTAKN 308 Y E L+ N Sbjct: 209 YDGSENLEELFN 220
>SRTF_STRP1 (P0C0E3) Lantibiotic transport ATP-binding protein srtF| Length = 229 Score = 30.4 bits (67), Expect = 3.1 Identities = 21/72 (29%), Positives = 34/72 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD + +L + E + TI+ ++HI +E A I +I EG++ + Sbjct: 150 DEPTNGLDPIGIQELREII-ESFKSEGMTIMISSHILSEVEHLADFIGFIYEGKIILEKE 208 Query: 343 YSDIEELKTAKN 308 Y E L+ N Sbjct: 209 YDGSENLEELFN 220
>Y2353_MYCBO (P63400) Hypothetical ABC transporter ATP-binding protein Mb2353c| Length = 697 Score = 30.0 bits (66), Expect = 4.0 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSA 347 DE LD ++ LL ++ R T+V +H F G+E ++++G L+ +A Sbjct: 631 DEPLAGLDAASQRGLLRLLEDLRRARGLTVVVVSHDFAGMEELCPRTLHLRDGVLESAA 689
>Y2326_MYCTU (P63399) Hypothetical ABC transporter ATP-binding protein| Rv2326c/MT2388 Length = 697 Score = 30.0 bits (66), Expect = 4.0 Identities = 16/59 (27%), Positives = 29/59 (49%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSA 347 DE LD ++ LL ++ R T+V +H F G+E ++++G L+ +A Sbjct: 631 DEPLAGLDAASQRGLLRLLEDLRRARGLTVVVVSHDFAGMEELCPRTLHLRDGVLESAA 689
>OPPD_BACSU (P24136) Oligopeptide transport ATP-binding protein oppD| Length = 358 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/64 (23%), Positives = 32/64 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LDV + +L+ K+ ++ + +I++ TH + A +A + G++ + Sbjct: 183 DEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGT 242 Query: 343 YSDI 332 +I Sbjct: 243 VDEI 246
>MODC_PHOPR (Q6LHL2) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 358 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/64 (23%), Positives = 30/64 (46%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD+ + +L+ + + ++ IVY TH D + A + I +G++ S Sbjct: 152 DEPLASLDLPRKQELMPYLEMLAKEVNTPIVYVTHSLDEILRLADHMVMINQGKVVVSGN 211 Query: 343 YSDI 332 + + Sbjct: 212 VNSV 215
>MCBF_ECOLI (P05529) Protein mcbF| Length = 247 Score = 30.0 bits (66), Expect = 4.0 Identities = 20/72 (27%), Positives = 34/72 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE TV +D+ RM L + + + T+ ++THIFD L + + + R Sbjct: 159 DEPTVGIDIQYRMMLWELINKITADGK-TVFFSTHIFDELTRDKIPFYMLSKNSINR--- 214 Query: 343 YSDIEELKTAKN 308 YSD+ + + N Sbjct: 215 YSDMSDFIQSNN 226
>EFTU_BACFR (P33165) Elongation factor Tu (EF-Tu)| Length = 394 Score = 29.6 bits (65), Expect = 5.3 Identities = 20/46 (43%), Positives = 24/46 (52%) Frame = +2 Query: 371 LDVRDVGRPCLQPVEYVGGVDDRGFSLLALFLEEVEEIHPGHDIEI 508 L RDV +P L PVE V + RG +A E IH G +IEI Sbjct: 202 LPPRDVDKPFLMPVEDVFSITGRG--TVATGRIETGVIHVGDEIEI 245
>MODC_HAEDU (Q7VKP7) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 351 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/55 (23%), Positives = 28/55 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL 359 DE LD+ + +L+ + + Q + I+Y TH D + A + +++G++ Sbjct: 153 DEPLSALDLPRKQELITYLSQLANQVDIPILYVTHSLDEIIRLADQLILLEQGKI 207
>Y796_METJA (Q58206) ABC transporter ATP-binding protein MJ0796| Length = 235 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE T LD T ++ K+ E+ T+V TH + + + I Y+++GE++R K Sbjct: 170 DEPTGALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGEVEREEK 228 Query: 343 YSDIEE 326 ++ Sbjct: 229 LRGFDD 234
>FAS2_CANAL (P43098) Fatty acid synthase alpha subunit (EC 2.3.1.86) [Includes:| Acyl carrier; 3-oxoacyl-[acyl-carrier-protein] reductase (EC 1.1.1.100) (Beta-ketoacyl reductase); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41) (Beta-ketoacyl synth Length = 1885 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = -3 Query: 388 DIAYIQEGELKRSAKYSDIEELKTAKNLLSVVESWLKSETKLPKKEPALVETQPRRPS 215 D+A + + K+++K S +E + ++LL VVES + ET+ K+ T P P+ Sbjct: 545 DLARVYKAISKQASKDSKLELQRVYEDLLKVVESSKEIETEQLTKDILQAATVPTTPT 602
>MODC_MANSM (Q65SW3) Molybdenum import ATP-binding protein modC (EC 3.6.3.29)| Length = 352 Score = 29.6 bits (65), Expect = 5.3 Identities = 18/67 (26%), Positives = 33/67 (49%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD+ + +LL + ++ ++ I+Y TH D L A + + EG++ A Sbjct: 154 DEPLSALDLPRKRELLAYLEKLSQEINIPILYVTHSLDELFRLADFVVLLDEGKV---AA 210 Query: 343 YSDIEEL 323 + +E L Sbjct: 211 FDSLENL 217
>YDIA_SALTY (P67197) UPF0085 protein ydiA| Length = 277 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYQQTGVRPLVFYSIVL 75
>YDIA_SALTI (P67198) UPF0085 protein ydiA| Length = 277 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYQQTGVRPLVFYSIVL 75
>YDIA_SALPA (Q5PH77) UPF0085 protein ydiA| Length = 277 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYQQTGVRPLVFYSIVL 75
>YDIA_SALCH (Q57PT8) UPF0085 protein ydiA| Length = 277 Score = 29.6 bits (65), Expect = 5.3 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYQQTGVRPLVFYSIVL 75
>GLOX_BACSU (O31616) Glycine oxidase (EC 1.4.3.19)| Length = 369 Score = 29.3 bits (64), Expect = 6.9 Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%) Frame = -3 Query: 460 ECEQREATIVYATH---IFDGL--ETWA---TDIAYIQEGELKRSAKYSDIEELKTAKNL 305 ECE+R+A +A H ++ GL E +A DI G K + D+ +L+ +L Sbjct: 55 ECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDL 114 Query: 304 LSVVESWLKSETKLPKKEP 248 SV SW E L +KEP Sbjct: 115 DSV--SWYSKEEVL-EKEP 130
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 29.3 bits (64), Expect = 6.9 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%) Frame = +3 Query: 294 TTDSRFLAVLSSSMSEYFADLFSSPS----WMYAMSVAHVSSPSNMWVA*TIVASLCSHS 461 T S + S SMS YF + + W S + S+ ++M T A++C+H Sbjct: 382 TKSSISTTIPSFSMSTYFTTVSGVTTMYTTWCPYSSESETSTLTSMHETVTTDATVCTHE 441 Query: 462 SLKKSRRSILVTTS 503 S S+ + L+T+S Sbjct: 442 SCMPSQTTSLITSS 455
>OPUCA_BACSU (O34992) Glycine betaine/carnitine/choline transport ATP-binding| protein opuCA Length = 380 Score = 29.3 bits (64), Expect = 6.9 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL 359 DE LD +TR L + FK+ TIV+ TH D A I ++ GE+ Sbjct: 160 DEPFGALDPITRDSLQEEFKKLQRTLNKTIVFVTHDMDEAIKLADRIVILKAGEI 214
>SPTCA_DROME (P13395) Spectrin alpha chain| Length = 2415 Score = 29.3 bits (64), Expect = 6.9 Identities = 18/85 (21%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Frame = -3 Query: 430 YATHIFDG-----LETWATDIAYIQEGELKRSAKYSDIEELKTAKNLLSVVESWLKSETK 266 YA+++ D LE W +++EG +++ ++ D + L+ +E+W+ + + Sbjct: 1465 YASNLVDEKRKQVLERWR----HLKEGLIEKRSRLGDEQTLQQFSRDADEIENWIAEKLQ 1520 Query: 265 LPK----KEPALVETQPRRPSPFDA 203 L K+PA ++++ ++ F+A Sbjct: 1521 LATEESYKDPANIQSKHQKHQAFEA 1545
>TPM4_PIG (P67937) Tropomyosin alpha-4 chain (Tropomyosin-4)| Length = 247 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIA---YIQEGELKR 353 DE + V+ + D +E+ E +E + A HI + + ++A I EGEL+R Sbjct: 84 DESERGMKVIENRAMKD--EEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELER 141 Query: 352 SAKYSDIEELKTA------KNLLSVVESWLKSETKLPKKE 251 + + +++ ELK KN+ + ++S + K +KE Sbjct: 142 AEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKE 181
>TPM4_HUMAN (P67936) Tropomyosin alpha-4 chain (Tropomyosin-4) (TM30p1)| Length = 247 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIA---YIQEGELKR 353 DE + V+ + D +E+ E +E + A HI + + ++A I EGEL+R Sbjct: 84 DESERGMKVIENRAMKD--EEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELER 141 Query: 352 SAKYSDIEELKTA------KNLLSVVESWLKSETKLPKKE 251 + + +++ ELK KN+ + ++S + K +KE Sbjct: 142 AEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKE 181
>TPM4_HORSE (P02561) Tropomyosin alpha-4 chain (Tropomyosin-4) (Platelet beta| tropomyosin) Length = 247 Score = 29.3 bits (64), Expect = 6.9 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 9/100 (9%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIA---YIQEGELKR 353 DE + V+ + D +E+ E +E + A HI + + ++A I EGEL+R Sbjct: 84 DESERGMKVIENRAMKD--EEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELER 141 Query: 352 SAKYSDIEELKTA------KNLLSVVESWLKSETKLPKKE 251 + + +++ ELK KN+ + ++S + K +KE Sbjct: 142 AEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKE 181
>YDIA_SHISS (Q3Z250) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_SHIFL (P0A8A7) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_SHIDS (Q32FJ7) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_SHIBS (Q321G0) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_ECOLI (P0A8A4) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_ECOL6 (P0A8A5) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>YDIA_ECO57 (P0A8A6) UPF0085 protein ydiA| Length = 277 Score = 29.3 bits (64), Expect = 6.9 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Frame = +1 Query: 61 TLPYTETRNRKKKKKIQIPELYDKTGI*R--FYTIII 165 TLP+ E +R + K QI +Y +TG+ FY+I++ Sbjct: 39 TLPFVENESRARAVKDQIDAIYHQTGVRPLVFYSIVL 75
>ARAB2_STAS1 (Q49V87) Ribulokinase 2 (EC 2.7.1.16)| Length = 542 Score = 28.9 bits (63), Expect = 9.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 407 PVEYVGGVDDRGFSLLALFLEEVEEIHPG 493 P EYV +DRG S+ L E+ + +PG Sbjct: 341 PYEYVKTAEDRGISIFELLNEKASQRYPG 369
>SSUB_ECOLI (P0AAI1) Putative aliphatic sulfonates transport ATP-binding| protein ssuB Length = 255 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 8/98 (8%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEG------- 365 DE LD +TR+++ D ++ T++ TH A + I+EG Sbjct: 157 DEPLGALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLT 216 Query: 364 -ELKRSAKYSDIEELKTAKNLLSVVESWLKSETKLPKK 254 ++ R + + + +L V +SET+L K+ Sbjct: 217 VDIPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQ 254
>SSUB_ECO57 (P0AAI2) Putative aliphatic sulfonates transport ATP-binding| protein ssuB Length = 255 Score = 28.9 bits (63), Expect = 9.0 Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 8/98 (8%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEG------- 365 DE LD +TR+++ D ++ T++ TH A + I+EG Sbjct: 157 DEPLGALDALTRLEMQDLIVSLWQEHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLT 216 Query: 364 -ELKRSAKYSDIEELKTAKNLLSVVESWLKSETKLPKK 254 ++ R + + + +L V +SET+L K+ Sbjct: 217 VDIPRPRRLGSVRLAELEAEVLQRVMQRGESETRLRKQ 254
>RDRP_ROTS1 (P22678) RNA-directed RNA polymerase subunit VP1 (EC 2.7.7.48)| (Inner layer protein VP1) (Core protein VP1) Length = 1088 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = +3 Query: 231 WVSTSAGSFFGSLVSDFSHDSTTDSRFLAVLSSSMSEYFADLFSSP 368 ++ T A S L+S FSHD ++ L VLS S A L SSP Sbjct: 202 YLVTWANSSIEMLMSVFSHDDYLIAKELIVLSYSNRSTLAKLVSSP 247
>BCRA_BACLI (P42332) Bacitracin transport ATP-binding protein bcrA| Length = 306 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGEL----- 359 DE T LD + ++ ++R TI ++HI +E + I EG+L Sbjct: 157 DEPTNGLDPIGIKEMRRLIHSLAKERNITIFISSHILSEIEQLVDHVGIIHEGKLLEEIP 216 Query: 358 -----KRSAKYSDIE 329 KR+ KY + + Sbjct: 217 FDHLKKRNRKYLEFQ 231
>ABCAC_HUMAN (Q86UK0) ATP-binding cassette sub-family A member 12 (ATP-binding| cassette transporter 12) (ATP-binding cassette 12) Length = 2595 Score = 28.9 bits (63), Expect = 9.0 Identities = 16/56 (28%), Positives = 29/56 (51%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELK 356 DE + +D +R + D + R TI+ +TH D E + IA++++G L+ Sbjct: 1503 DEPSTGVDPCSRRSIWDVISKNKTAR--TIILSTHHLDEAEVLSDRIAFLEQGGLR 1556
>CBIO3_METAC (Q8TTN2) Putative cobalt import ATP-binding protein cbiO 3| Length = 444 Score = 28.9 bits (63), Expect = 9.0 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 12/109 (11%) Frame = -3 Query: 523 DEITVDLDVVTRMDLLDFFKEECEQREATIVYATHIFDGLETWATDIAYIQEGELKRSAK 344 DE LD V ++LD E Q E IV +TH D +WA I + ++ S Sbjct: 167 DEPLTSLDPVGADEILDLLNE-LNQFEKAIVISTHDIDFAYSWADYIYLLVNRKIIGSGT 225 Query: 343 ----YSDIEELKTAKNLLSVV--------ESWLKSETKLPKKEPALVET 233 + D LK A + +V + + S ++PK P +V+T Sbjct: 226 PEEIFRDPGMLKDAGLRIPMVLEIYYEIQKRNMASVNRVPKTVPEIVDT 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,209,582 Number of Sequences: 219361 Number of extensions: 1229875 Number of successful extensions: 4364 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 4254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4363 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
