>DNAJ_WOLPM (Q73IV4) Chaperone protein dnaJ|
          Length = 372

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           LR+H D++PG+ +A  EEKF     AY  L    K A
Sbjct: 30  LRYHPDRNPGNQEA--EEKFKEVTAAYEVLSDSEKRA 64

>MUS81_RAT (Q4KM32) Crossover junction endonuclease MUS81 (EC 3.1.22.-)|
          Length = 551

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +1

Query: 37  RKRMLKKGTNNRWVQGRALAXVQEPPLPARDGTIXLPKSRAXL*HGGTGLSRXLQD 204
           R     +G + R+V  +AL  +Q  PLP R+G     K    L H G  L R L +
Sbjct: 29  RDEAASRGRHTRFVFQKALRSLQRYPLPLRNG-----KEAKILQHFGDRLCRMLDE 79

>DNAJ_BDEBA (Q6MNG0) Chaperone protein dnaJ|
          Length = 371

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           +++H DK+PG+ +A  EEKF     AY  L    K A
Sbjct: 31  MQFHPDKNPGNKEA--EEKFKEAAGAYEVLSDAQKRA 65

>DNJB8_HUMAN (Q8NHS0) DnaJ homolog subfamily B member 8|
          Length = 232

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSL 211
           LRWH DK+P + +   E+KF L   AY  L
Sbjct: 28  LRWHPDKNPDNKEE-AEKKFKLVSEAYEVL 56

>DNAJ_ZYMMO (Q5NPS5) Chaperone protein dnaJ|
          Length = 375

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           +R+H D++PG S A  EE+F     AY+ L    K A
Sbjct: 30  MRYHPDRNPGDSDA--EERFKAISEAYDCLKDPQKRA 64

>DNAJ_BACFR (Q64VI7) Chaperone protein dnaJ|
          Length = 394

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           +++H DK+PG  +A  EEKF     AY+ L    K A
Sbjct: 31  IQYHPDKNPGDKEA--EEKFKEAAEAYDVLSNPDKRA 65

>DNAJ_BACFN (Q5LED4) Chaperone protein dnaJ|
          Length = 394

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           +++H DK+PG  +A  EEKF     AY+ L    K A
Sbjct: 31  IQYHPDKNPGDKEA--EEKFKEAAEAYDVLSNPDKRA 65

>DNAJ_WOLTR (Q5GRK1) Chaperone protein dnaJ|
          Length = 374

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 300 LRWHXDKHPGSSQAVXEEKFXLXVXAYNSLXTVLKXA 190
           L++H D++PG+ +A  EEKF     AY  L    K A
Sbjct: 30  LKYHPDRNPGNKEA--EEKFKEITAAYEVLSDSEKRA 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,165,300
Number of Sequences: 219361
Number of extensions: 435715
Number of successful extensions: 799
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)