| Clone Name | rbags18m06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0063F24, complete sequence Length = 152738 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 604 tgcatggctcctcgtgcaaactccaactccatggtgtcactc 645 |||||||||||| |||||||||| | |||||||||||||||| Sbjct: 123162 tgcatggctccttgtgcaaactcgatctccatggtgtcactc 123203
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 604 tgcatggctcctcgtgcaaactccaactccatggtgtcactc 645 |||||||||||| |||||||||| | |||||||||||||||| Sbjct: 20337 tgcatggctccttgtgcaaactcgatctccatggtgtcactc 20378
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 604 tgcatggctcctcgtgcaaactccaactccatggtgtcactc 645 |||||||||||| |||||||||| | |||||||||||||||| Sbjct: 19614841 tgcatggctccttgtgcaaactcgatctccatggtgtcactc 19614882
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 1e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 604 tgcatggctcctcgtgcaaactccaactccatggtgtcactc 645 |||||||||||| |||||||||| | |||||||||||||||| Sbjct: 19900700 tgcatggctccttgtgcaaactcgatctccatggtgtcactc 19900741
>emb|CR380957.1| Candida glabrata strain CBS138 chromosome K complete sequence Length = 1302002 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 525 taaaccaaatacaaaatcaccaa 547 ||||||||||||||||||||||| Sbjct: 809016 taaaccaaatacaaaatcaccaa 808994
>emb|AL034376.10|HS529N6 Human DNA sequence from clone RP4-529N6 on chromosome 6p24.1-25.3 Contains a novel gene, complete sequence Length = 131819 Score = 44.1 bits (22), Expect = 0.66 Identities = 25/26 (96%) Strand = Plus / Plus Query: 121 acaaaaaatcaatatgatggaaaata 146 ||||||||||||||||||||| |||| Sbjct: 3210 acaaaaaatcaatatgatggataata 3235
>gb|AF509534.1| Aegilops tauschii NBS-LRR-like gene sequence Length = 5171 Score = 44.1 bits (22), Expect = 0.66 Identities = 34/38 (89%) Strand = Plus / Minus Query: 655 aaccttgttagacaccgaaatggatagccactgtcaat 692 |||||||| ||||||||||| ||| | ||||||||||| Sbjct: 3848 aaccttgtcagacaccgaaagggacaaccactgtcaat 3811
>emb|CR855332.7| Zebrafish DNA sequence from clone DKEY-31M14 in linkage group 15, complete sequence Length = 212455 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aacataaaaaattataataat 90 ||||||||||||||||||||| Sbjct: 111277 aacataaaaaattataataat 111297
>emb|AL355980.6| Human DNA sequence from clone RP11-295L12 on chromosome 13, complete sequence Length = 191856 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 aaaaaatcaatatgatggaaaataa 147 ||||||| ||||||||||||||||| Sbjct: 70333 aaaaaataaatatgatggaaaataa 70357
>emb|AL136322.24| Human DNA sequence from clone RP11-75C23 on chromosome 1q31.2-32.1 Contains part of the CRB1 gene for crumbs homolog 1 (Drosophila), complete sequence Length = 55954 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 ataattctaccctctgcttct 331 ||||||||||||||||||||| Sbjct: 34894 ataattctaccctctgcttct 34874
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aacataaaaaattataataat 90 ||||||||||||||||||||| Sbjct: 811545 aacataaaaaattataataat 811565
>gb|AC066616.7| Homo sapiens chromosome 15 clone RP11-925D8 map 15q21.3, complete sequence Length = 209779 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ataataatctatggtgtattttcag 107 |||| |||||||||||||||||||| Sbjct: 188122 ataaaaatctatggtgtattttcag 188146
>gb|AC174350.4| Medicago truncatula clone mth2-3g18, complete sequence Length = 77292 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 caactacatttctcacatttc 454 ||||||||||||||||||||| Sbjct: 40302 caactacatttctcacatttc 40322
>gb|AC026774.7| Homo sapiens chromosome 5 clone CTC-235G5, complete sequence Length = 108451 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 atatgatggaaaataacagtt 152 ||||||||||||||||||||| Sbjct: 29430 atatgatggaaaataacagtt 29410
>emb|BX537152.15| Zebrafish DNA sequence from clone DKEY-61N7 in linkage group 14, complete sequence Length = 243729 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 aaaaaattataataatctatg 95 ||||||||||||||||||||| Sbjct: 113925 aaaaaattataataatctatg 113905
>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24, complete sequence Length = 155029 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aacataaaaaattataataat 90 ||||||||||||||||||||| Sbjct: 28311 aacataaaaaattataataat 28331
>gb|AC090066.2| Homo sapiens chromosome 5 clone CTC-277N16, complete sequence Length = 89420 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 atatgatggaaaataacagtt 152 ||||||||||||||||||||| Sbjct: 29430 atatgatggaaaataacagtt 29410
>emb|BX465859.13| Zebrafish DNA sequence from clone DKEYP-67G10 in linkage group 4, complete sequence Length = 214205 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 taacataaaaaattataataa 89 ||||||||||||||||||||| Sbjct: 50385 taacataaaaaattataataa 50365
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 taaaaaattataataatctat 94 ||||||||||||||||||||| Sbjct: 19085674 taaaaaattataataatctat 19085654
>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18, complete sequence Length = 153244 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aacataaaaaattataataat 90 ||||||||||||||||||||| Sbjct: 28099 aacataaaaaattataataat 28119
>gb|AC084781.2|AC084781 Homo sapiens chromosome 15 clone RP11-355N15 map 15q21.3, complete sequence Length = 173386 Score = 42.1 bits (21), Expect = 2.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ataataatctatggtgtattttcag 107 |||| |||||||||||||||||||| Sbjct: 38345 ataaaaatctatggtgtattttcag 38369
>dbj|AP003350.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0702H08 Length = 166899 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 74 taaaaaattataataatctat 94 ||||||||||||||||||||| Sbjct: 51091 taaaaaattataataatctat 51071
>emb|BX248111.7| Zebrafish DNA sequence from clone DKEY-22L11 in linkage group 4, complete sequence Length = 185023 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 taacataaaaaattataataa 89 ||||||||||||||||||||| Sbjct: 40379 taacataaaaaattataataa 40399
>emb|CT025579.12| Mouse DNA sequence from clone RP24-189A10 on chromosome 14, complete sequence Length = 173961 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 cctctgcttcttcagctctaa 341 ||||||||||||||||||||| Sbjct: 48300 cctctgcttcttcagctctaa 48320
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 ttaataaatgttgacaaaaaa 29 ||||||||||||||||||||| Sbjct: 153169 ttaataaatgttgacaaaaaa 153149
>gb|AC156797.2| Mus musculus BAC clone RP24-88A16 from chromosome 14, complete sequence Length = 166341 Score = 42.1 bits (21), Expect = 2.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 321 cctctgcttcttcagctctaa 341 ||||||||||||||||||||| Sbjct: 8110 cctctgcttcttcagctctaa 8130 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,200,844 Number of Sequences: 3902068 Number of extensions: 9200844 Number of successful extensions: 203800 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 203481 Number of HSP's gapped (non-prelim): 319 length of query: 749 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 726 effective length of database: 17,143,297,704 effective search space: 12446034133104 effective search space used: 12446034133104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 21 (42.1 bits)