ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X16648.1|HVPR1 Barley fungal pathogen induced mRNA for patho... 1227 0.0
2gb|AY111294.1| Zea mays CL31612_1 mRNA sequence 258 2e-65
3ref|NM_188784.1| Oryza sativa (japonica cultivar-group), predic... 216 7e-53
4ref|NM_188786.1| Oryza sativa (japonica cultivar-group), predic... 202 1e-48
5dbj|AK059893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 202 1e-48
6gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 141 3e-30
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
8dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
9ref|NM_191890.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
10ref|NM_191889.1| Oryza sativa (japonica cultivar-group), predic... 56 2e-04
11dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic D... 56 2e-04
12dbj|AK109409.2| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
13dbj|AK106037.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
14dbj|AK061471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 2e-04
15ref|XM_848999.1| PREDICTED: Canis familiaris similar to RIC3 pro... 44 0.58
16emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in... 44 0.58
17gb|AC008513.7|AC008513 Homo sapiens chromosome 5 clone CTC-455C2... 44 0.58
18gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 42 2.3
19ref|XM_369537.1| Magnaporthe grisea 70-15 chromosome III hypothe... 42 2.3
20emb|BX648301.1|HSM808449 Homo sapiens mRNA; cDNA DKFZp686K04125 ... 42 2.3
21gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, comp... 42 2.3
22dbj|AK131908.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 2.3
23dbj|AK131907.1| Mus musculus adult male tongue cDNA, RIKEN full-... 42 2.3
24gb|AC010259.7| Homo sapiens chromosome 5 clone CTC-454M9, comple... 42 2.3
25gb|AC007560.4| Homo sapiens BAC clone RP11-386G20 from 2, comple... 42 2.3
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.3
27ref|NM_001033280.1| Mus musculus gene model 94, (NCBI) (Gm94), mRNA 42 2.3
28emb|AJ970646.1| Candidatus Phytoplasma solani hcaD pseudogene, c... 42 2.3
29gb|AF486557.1| Campylobacter jejuni strain 81116 HsdR (hsdR) gen... 42 2.3
30gb|AF486553.1| Campylobacter jejuni strain RM1861 HsdR (hsdR) ge... 42 2.3
31gb|AF486546.1| Campylobacter jejuni strain RM1049 HsdR (hsdR) ge... 42 2.3
32gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, c... 42 2.3
33gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.3
34gb|CP000014.1| Borrelia garinii PBi plasmid cp26, complete sequence 40 9.0
35gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 9.0
36ref|XM_415333.1| PREDICTED: Gallus gallus similar to butyrophili... 40 9.0
37gb|AE007307.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 40 9.0
38gb|AC146699.5| Mus musculus chromosome 6, clone RP24-211G11, com... 40 9.0
39gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete... 40 9.0
40emb|CR671033.2|CNS0FGQN Tetraodon nigroviridis full-length cDNA 40 9.0
41emb|AJ748131.1| Streptomyces ribosidificus ribostamycin biosynth... 40 9.0
42emb|AL591215.12| Human DNA sequence from clone RP11-20D12 on chr... 40 9.0
43emb|AL445929.5| Human DNA sequence from clone RP11-408M7 on chro... 40 9.0
44emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chro... 40 9.0
45emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chr... 40 9.0
46emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.0
47emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 9.0
48emb|BX294371.15| Zebrafish DNA sequence from clone CH211-263B6 i... 40 9.0
49gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome... 40 9.0
50gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.0
51gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, r... 40 9.0
52gb|AE004922.1| Pseudomonas aeruginosa PAO1, section 483 of 529 o... 40 9.0
53emb|AL732577.5| Zebrafish DNA sequence from clone RP71-1M10, com... 40 9.0
54gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15... 40 9.0
55gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 9.0
56emb|AJ744850.1| Streptomyces ribosidificus ribostamycin biosynth... 40 9.0
57gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, comple... 40 9.0
58emb|CR933002.7| Zebrafish DNA sequence from clone DKEY-246A18 in... 40 9.0
59emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chr... 40 9.0
60emb|AL670360.8| Mouse DNA sequence from clone RP23-3A4 on chromo... 40 9.0
61dbj|D17389.1|DRORYRH Drosophila melanogaster DNA for ryanodine r... 40 9.0
62dbj|AB017464.1| Carabus hortensis mitochondrial ND5 gene, isolat... 40 9.0 
>emb|X16648.1|HVPR1 Barley fungal pathogen induced mRNA for pathogen-related protein
          Length = 864

 Score = 1227 bits (619), Expect = 0.0
 Identities = 650/659 (98%), Gaps = 1/659 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaaatctttttattgatttaaatatttcttgcc-ttacaaggaattttgccaaatccga 59
           |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 859 aaaaatctttttattgatataaatatttcttgccattacaaggaattttgccaaatccga 800

                                                                       
Query: 60  aatcctggagacgatgatacaagtcacatgtttcgccaattctgttgcgcttcagtctgc 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 aatcctggagacgatgatacaagtcacatgtttcgccaattctgttgcgcttcagtctgc 740

                                                                       
Query: 120 tcctctcatcacagggcaacctgaagccgatgcagaagcagccggcgcagtcaagaagct 179
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 739 tcctctcatcacagggcaacctgaagctgatgcagaagcagccggcgcagtcaagaagct 680

                                                                       
Query: 180 cgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttgatgtcctcatc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 679 cgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttggtgtcctcatc 620

                                                                       
Query: 240 aacatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggagggtggccctt 299
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 619 aacatggaagacgcaaacgccgaagaactcgacgcggccaccgtgcggagggtggccctt 560

                                                                       
Query: 300 gaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctggcgg 359
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 559 gaaggggccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctgacgg 500

                                                                       
Query: 360 gccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgaggaacgt 419
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgaggaacgt 440

                                                                       
Query: 420 ggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcggcag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcggcag 380

                                                                       
Query: 480 cgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcctcccgcgtcagtgg 539
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 379 cgtggtcgccaggaacgcgttgtagccgcccatggccatcacctcctcccgcgtcagtgg 320

                                                                       
Query: 540 cttcagcccgttggtggaggcggagtagttcttgaggttgacgctcttctggtcctcggg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttcagcccgttggtggaggcggagtagttcttgaggttgacgctcttctggtcctcggg 260

                                                                      
Query: 600 acgcaccttgtggaccatctccatctcccaggtcttgagcaaccgctgcaccttctctt 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 acgcaccttgtggaccatctccatctcccaggtcttgagcaaccgctgcaccttctctt 201
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>gb|AY111294.1| Zea mays CL31612_1 mRNA sequence
          Length = 589

 Score =  258 bits (130), Expect = 2e-65
 Identities = 297/355 (83%), Gaps = 6/355 (1%)
 Strand = Plus / Plus

                                                                       
Query: 170 tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
           |||||||||  |||||||||||||| |||||||||||| |||||| ||| |||||||| |
Sbjct: 226 tcaagaagccggcgaggaagttgccgcgctcgtagaagtactctgacttgtccaccttca 285

                                                                       
Query: 230 tgtcctcatcaacatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggag 289
           |||| || ||||||||||||| ||| |||||||||| |||||| |||   ||| |||| |
Sbjct: 286 tgtcttcgtcaacatggaagatgcagacgccgaagagctcgacccgctggccgngcggcg 345

                                                                       
Query: 290 ggtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgg 349
           |||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| 
Sbjct: 346 ggtggcccttgaagggcccctccatgtagccccagtggcggaacttgaaggcgatcctg- 404

                                                                       
Query: 350 gagctggcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccg 409
                |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||
Sbjct: 405 -----ggcgggccgctgtagacgtcgagcacctcgatggcgaagccccgcgggaaggccg 459

                                                                       
Query: 410 tgaggaacgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgct 469
           ||  ||| |||| | | || ||||| || | |||    ||||||||||||||||||||||
Sbjct: 460 tggtgaaggtggccatggcggactccacggtctcgctgtccgggtcgtagatgcggtgct 519

                                                                  
Query: 470 ccggcggcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctc 524
           ||     |||| ||||   ||||||   |||||||||||| |||||||| |||||
Sbjct: 520 ccnnnnncagcttggtgcgcaggaagttgttgtagccgccgatggccatcacctc 574
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>ref|NM_188784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 723

 Score =  216 bits (109), Expect = 7e-53
 Identities = 303/368 (82%), Gaps = 6/368 (1%)
 Strand = Plus / Minus

                                                                       
Query: 151 gcagaagcagccggcgcagtcaagaagctcgcgaggaagttgccacgctcgtagaagaac 210
           |||| |||||| |||||  ||||||||||||||||||| ||||| || ||||||||||| 
Sbjct: 674 gcagcagcagcaggcgcgctcaagaagctcgcgaggaaattgccgcgttcgtagaagaat 615

                                                                       
Query: 211 tctgccttctccaccttgatgtcctcatcaacatggaagacgcaaacgccgaagaactcg 270
           || |||||||| ||||| || ||||| ||||||||||| | ||||| |||||| ||||| 
Sbjct: 614 tccgccttctcaaccttcatctcctcgtcaacatggaaaatgcaaatgccgaaaaactca 555

                                                                       
Query: 271 acgcgcccaccgtgcggagggtggcccttgaagggaccctccatgtaaccccagtgccgg 330
           || ||| | || || || |||||  || ||||||| ||||||||||  ||||||||||| 
Sbjct: 554 acccgctcgccatggggcgggtgctccatgaaggggccctccatgtgcccccagtgccga 495

                                                                       
Query: 331 aacttgaaggcgatcctgggagctggcgggccgctgtagacgtccagcacctcgatggcg 390
           ||||||||| ||||||       ||| ||||| ||||||||||| |||||||||||||||
Sbjct: 494 aacttgaagacgatcc------gtggtgggccactgtagacgtcgagcacctcgatggcg 441

                                                                       
Query: 391 aagccccgggggaacgccgtgaggaacgtggacgtcgccgactcgaccgactccgcctcc 450
           ||||| || ||||||||||| ||||| |||| | |  | ||||| | || ||||   |||
Sbjct: 440 aagccacgcgggaacgccgtcaggaaggtggccatgccggactccagcgtctccttgtcc 381

                                                                       
Query: 451 gggtcgtagatgcggtgctccggcggcagcgtggtcgccaggaacgcgttgtagccgccc 510
           ||||||||||||||||||||||| |||||| | |||  || |||||||||||||| ||| 
Sbjct: 380 gggtcgtagatgcggtgctccggtggcagcttcgtctgcaagaacgcgttgtagctgccg 321

                   
Query: 511 atggccat 518
           ||||||||
Sbjct: 320 atggccat 313



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                       
Query: 583 ctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgagcaac 642
           |||||||||||||| || |||||||||||||| | |||||||||||||||||| ||||| 
Sbjct: 248 ctcttctggtcctctggtcgcaccttgtggacgagctccatctcccaggtcttcagcaat 189

                         
Query: 643 cgctgcaccttctc 656
           | ||| ||||||||
Sbjct: 188 ctctggaccttctc 175
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>ref|NM_188786.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 723

 Score =  202 bits (102), Expect = 1e-48
 Identities = 293/357 (82%), Gaps = 6/357 (1%)
 Strand = Plus / Minus

                                                                       
Query: 170 tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
           ||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||| |
Sbjct: 652 tcaagaagctcgcgaggaaattgccgcgctcgtagaagtactccgtcttctccaccttca 593

                                                                       
Query: 230 tgtcctcatcaacatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggag 289
           | ||||| || |||||||||| ||| | ||| ||||||||||| |||   || || || |
Sbjct: 592 tctcctcgtcgacatggaagatgcagatgccaaagaactcgacccgcttgccatgggggg 533

                                                                       
Query: 290 ggtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgg 349
           | ||  |||||||||| ||||||||||| |||||||| |||||||||||| ||||||   
Sbjct: 532 gatgctccttgaagggcccctccatgtacccccagtgtcggaacttgaagacgatcc--- 476

                                                                       
Query: 350 gagctggcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccg 409
               ||| || || ||||||||||| |||||||||||||| ||||| || ||||||||||
Sbjct: 475 ---gtggtggaccactgtagacgtcgagcacctcgatggcaaagccacgcgggaacgccg 419

                                                                       
Query: 410 tgaggaacgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgct 469
           | | |||||||| | |  | ||||| | || |||    |||||||| |||||||||||||
Sbjct: 418 tcaagaacgtggccatgccggactccagcgtctcattgtccgggtcatagatgcggtgct 359

                                                                    
Query: 470 ccggcggcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcct 526
           ||||||||||  | |||  ||||||||||||||||||||| || ||||| |||||||
Sbjct: 358 ccggcggcagtttcgtctgcaggaacgcgttgtagccgccgatagccatcacctcct 302



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                       
Query: 579 gacgctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgag 638
           ||||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||
Sbjct: 249 gacgctcttctggtcctcgggtcgcaccttgtggatgagctccatctcccaggtcttcag 190

                             
Query: 639 caaccgctgcaccttctc 656
           ||||| ||| ||||||||
Sbjct: 189 caacctctggaccttctc 172
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>dbj|AK059893.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-D11, full
           insert sequence
          Length = 1312

 Score =  202 bits (102), Expect = 1e-48
 Identities = 293/357 (82%), Gaps = 6/357 (1%)
 Strand = Plus / Minus

                                                                       
Query: 170 tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
           ||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||| |
Sbjct: 870 tcaagaagctcgcgaggaaattgccgcgctcgtagaagtactccgtcttctccaccttca 811

                                                                       
Query: 230 tgtcctcatcaacatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggag 289
           | ||||| || |||||||||| ||| | ||| ||||||||||| |||   || || || |
Sbjct: 810 tctcctcgtcgacatggaagatgcagatgccaaagaactcgacccgcttgccatgggggg 751

                                                                       
Query: 290 ggtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgg 349
           | ||  |||||||||| ||||||||||| |||||||| |||||||||||| ||||||   
Sbjct: 750 gatgctccttgaagggcccctccatgtacccccagtgtcggaacttgaagacgatcc--- 694

                                                                       
Query: 350 gagctggcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccg 409
               ||| || || ||||||||||| |||||||||||||| ||||| || ||||||||||
Sbjct: 693 ---gtggtggaccactgtagacgtcgagcacctcgatggcaaagccacgcgggaacgccg 637

                                                                       
Query: 410 tgaggaacgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgct 469
           | | |||||||| | |  | ||||| | || |||    |||||||| |||||||||||||
Sbjct: 636 tcaagaacgtggccatgccggactccagcgtctcattgtccgggtcatagatgcggtgct 577

                                                                    
Query: 470 ccggcggcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcct 526
           ||||||||||  | |||  ||||||||||||||||||||| || ||||| |||||||
Sbjct: 576 ccggcggcagtttcgtctgcaggaacgcgttgtagccgccgatagccatcacctcct 520



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                       
Query: 579 gacgctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgag 638
           ||||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||
Sbjct: 467 gacgctcttctggtcctcgggtcgcaccttgtggatgagctccatctcccaggtcttcag 408

                             
Query: 639 caaccgctgcaccttctc 656
           ||||| ||| ||||||||
Sbjct: 407 caacctctggaccttctc 390
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score =  141 bits (71), Expect = 3e-30
 Identities = 226/278 (81%), Gaps = 6/278 (2%)
 Strand = Plus / Minus

                                                                          
Query: 241    acatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggagggtggcccttg 300
              |||||||| | ||||| |||||| ||||| || ||| | || || || |||||  || ||
Sbjct: 123831 acatggaaaatgcaaatgccgaaaaactcaacccgctcgccatggggcgggtgctccatg 123772

                                                                          
Query: 301    aagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctggcggg 360
              ||||| ||||||||||  ||||||||||| ||||||||| ||||||       ||| |||
Sbjct: 123771 aaggggccctccatgtgcccccagtgccgaaacttgaagacgatccg------tggtggg 123718

                                                                          
Query: 361    ccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgaggaacgtg 420
              || ||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 123717 ccactgtagacgtcgagcacctcgatggcgaagccacgcgggaacgccgtcaggaaggtg 123658

                                                                          
Query: 421    gacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcggcagc 480
              | | |  | ||||| | || ||||   |||||||||||||||||||||||||| ||||||
Sbjct: 123657 gccatgccggactccagcgtctccttgtccgggtcgtagatgcggtgctccggtggcagc 123598

                                                    
Query: 481    gtggtcgccaggaacgcgttgtagccgcccatggccat 518
               | |||  || |||||||||||||| ||| ||||||||
Sbjct: 123597 ttcgtctgcaagaacgcgttgtagctgccgatggccat 123560



 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/231 (82%), Gaps = 6/231 (2%)
 Strand = Plus / Plus

                                                                          
Query: 296    ccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctg 355
              |||||||||| ||||||||||| |||||||| |||||||||||| ||||||       ||
Sbjct: 139799 ccttgaagggcccctccatgtacccccagtgtcggaacttgaagacgatccg------tg 139852

                                                                          
Query: 356    gcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgagga 415
              | || || ||||||||||| |||||||||||||| ||||| || ||||||||||| | ||
Sbjct: 139853 gtggaccactgtagacgtcgagcacctcgatggcaaagccacgcgggaacgccgtcaaga 139912

                                                                          
Query: 416    acgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcg 475
              |||||| | |  | ||||| | || |||    |||||||| |||||||||||||||||||
Sbjct: 139913 acgtggccatgccggactccagcgtctcattgtccgggtcatagatgcggtgctccggcg 139972

                                                                 
Query: 476    gcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcct 526
              ||||  | |||  ||||||||||||||||||||| || ||||| |||||||
Sbjct: 139973 gcagtttcgtctgcaggaacgcgttgtagccgccgatagccatcacctcct 140023



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                          
Query: 579    gacgctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgag 638
              ||||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||
Sbjct: 140429 gacgctcttctggtcctcgggtcgcaccttgtggatgagctccatctcccaggtcttcag 140488

                                
Query: 639    caaccgctgcaccttctc 656
              ||||| ||| ||||||||
Sbjct: 140489 caacctctggaccttctc 140506



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                          
Query: 583    ctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgagcaac 642
              |||||||||||||| || |||||||||||||| | |||||||||||||||||| ||||| 
Sbjct: 123396 ctcttctggtcctctggtcgcaccttgtggacgagctccatctcccaggtcttcagcaat 123337

                            
Query: 643    cgctgcaccttctc 656
              | ||| ||||||||
Sbjct: 123336 ctctggaccttctc 123323



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                          
Query: 151    gcagaagcagccggcgcagtcaagaagctcgcgaggaagttgccacgctcgtagaagaac 210
              |||| |||||| |||||  ||||||||||||||||||| ||||| || ||||||||||| 
Sbjct: 124359 gcagcagcagcaggcgcgctcaagaagctcgcgaggaaattgccgcgttcgtagaagaat 124300

                                              
Query: 211    tctgccttctccaccttgatgtcctcatcaac 242
              || |||||||| ||||| || ||||| |||||
Sbjct: 124299 tccgccttctcaaccttcatctcctcgtcaac 124268



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                          
Query: 170    tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
              ||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||| |
Sbjct: 139150 tcaagaagctcgcgaggaaattgccgcgctcgtagaagtactccgtcttctccaccttca 139209

                     
Query: 230    tgtcctc 236
              | |||||
Sbjct: 139210 tctcctc 139216
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  141 bits (71), Expect = 3e-30
 Identities = 226/278 (81%), Gaps = 6/278 (2%)
 Strand = Plus / Minus

                                                                           
Query: 241     acatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggagggtggcccttg 300
               |||||||| | ||||| |||||| ||||| || ||| | || || || |||||  || ||
Sbjct: 8159710 acatggaaaatgcaaatgccgaaaaactcaacccgctcgccatggggcgggtgctccatg 8159651

                                                                           
Query: 301     aagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctggcggg 360
               ||||| ||||||||||  ||||||||||| ||||||||| ||||||       ||| |||
Sbjct: 8159650 aaggggccctccatgtgcccccagtgccgaaacttgaagacgatccg------tggtggg 8159597

                                                                           
Query: 361     ccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgaggaacgtg 420
               || ||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 8159596 ccactgtagacgtcgagcacctcgatggcgaagccacgcgggaacgccgtcaggaaggtg 8159537

                                                                           
Query: 421     gacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcggcagc 480
               | | |  | ||||| | || ||||   |||||||||||||||||||||||||| ||||||
Sbjct: 8159536 gccatgccggactccagcgtctccttgtccgggtcgtagatgcggtgctccggtggcagc 8159477

                                                     
Query: 481     gtggtcgccaggaacgcgttgtagccgcccatggccat 518
                | |||  || |||||||||||||| ||| ||||||||
Sbjct: 8159476 ttcgtctgcaagaacgcgttgtagctgccgatggccat 8159439



 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/231 (82%), Gaps = 6/231 (2%)
 Strand = Plus / Plus

                                                                           
Query: 296     ccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctg 355
               |||||||||| ||||||||||| |||||||| |||||||||||| ||||||       ||
Sbjct: 8175678 ccttgaagggcccctccatgtacccccagtgtcggaacttgaagacgatccg------tg 8175731

                                                                           
Query: 356     gcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgagga 415
               | || || ||||||||||| |||||||||||||| ||||| || ||||||||||| | ||
Sbjct: 8175732 gtggaccactgtagacgtcgagcacctcgatggcaaagccacgcgggaacgccgtcaaga 8175791

                                                                           
Query: 416     acgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcg 475
               |||||| | |  | ||||| | || |||    |||||||| |||||||||||||||||||
Sbjct: 8175792 acgtggccatgccggactccagcgtctcattgtccgggtcatagatgcggtgctccggcg 8175851

                                                                  
Query: 476     gcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcct 526
               ||||  | |||  ||||||||||||||||||||| || ||||| |||||||
Sbjct: 8175852 gcagtttcgtctgcaggaacgcgttgtagccgccgatagccatcacctcct 8175902



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                           
Query: 579     gacgctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgag 638
               ||||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||
Sbjct: 8176308 gacgctcttctggtcctcgggtcgcaccttgtggatgagctccatctcccaggtcttcag 8176367

                                 
Query: 639     caaccgctgcaccttctc 656
               ||||| ||| ||||||||
Sbjct: 8176368 caacctctggaccttctc 8176385



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                           
Query: 583     ctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgagcaac 642
               |||||||||||||| || |||||||||||||| | |||||||||||||||||| ||||| 
Sbjct: 8159275 ctcttctggtcctctggtcgcaccttgtggacgagctccatctcccaggtcttcagcaat 8159216

                             
Query: 643     cgctgcaccttctc 656
               | ||| ||||||||
Sbjct: 8159215 ctctggaccttctc 8159202



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                           
Query: 151     gcagaagcagccggcgcagtcaagaagctcgcgaggaagttgccacgctcgtagaagaac 210
               |||| |||||| |||||  ||||||||||||||||||| ||||| || ||||||||||| 
Sbjct: 8160238 gcagcagcagcaggcgcgctcaagaagctcgcgaggaaattgccgcgttcgtagaagaat 8160179

                                               
Query: 211     tctgccttctccaccttgatgtcctcatcaac 242
               || |||||||| ||||| || ||||| |||||
Sbjct: 8160178 tccgccttctcaaccttcatctcctcgtcaac 8160147



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                           
Query: 170     tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
               ||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||| |
Sbjct: 8175029 tcaagaagctcgcgaggaaattgccgcgctcgtagaagtactccgtcttctccaccttca 8175088

                      
Query: 230     tgtcctc 236
               | |||||
Sbjct: 8175089 tctcctc 8175095



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 291      gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
                |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 30514205 gtggcccttgtaggggccgtccatgtgtccccagtgccggaacttgaa 30514252



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                                
Query: 291      gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
                |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 30506183 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 30506230
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C11
          Length = 139399

 Score =  141 bits (71), Expect = 3e-30
 Identities = 226/278 (81%), Gaps = 6/278 (2%)
 Strand = Plus / Minus

                                                                         
Query: 241   acatggaagacgcaaacgccgaagaactcgacgcgcccaccgtgcggagggtggcccttg 300
             |||||||| | ||||| |||||| ||||| || ||| | || || || |||||  || ||
Sbjct: 77428 acatggaaaatgcaaatgccgaaaaactcaacccgctcgccatggggcgggtgctccatg 77369

                                                                         
Query: 301   aagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctggcggg 360
             ||||| ||||||||||  ||||||||||| ||||||||| ||||||       ||| |||
Sbjct: 77368 aaggggccctccatgtgcccccagtgccgaaacttgaagacgatccg------tggtggg 77315

                                                                         
Query: 361   ccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgaggaacgtg 420
             || ||||||||||| |||||||||||||||||||| || ||||||||||| ||||| |||
Sbjct: 77314 ccactgtagacgtcgagcacctcgatggcgaagccacgcgggaacgccgtcaggaaggtg 77255

                                                                         
Query: 421   gacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcggcagc 480
             | | |  | ||||| | || ||||   |||||||||||||||||||||||||| ||||||
Sbjct: 77254 gccatgccggactccagcgtctccttgtccgggtcgtagatgcggtgctccggtggcagc 77195

                                                   
Query: 481   gtggtcgccaggaacgcgttgtagccgcccatggccat 518
              | |||  || |||||||||||||| ||| ||||||||
Sbjct: 77194 ttcgtctgcaagaacgcgttgtagctgccgatggccat 77157



 Score =  135 bits (68), Expect = 2e-28
 Identities = 190/231 (82%), Gaps = 6/231 (2%)
 Strand = Plus / Plus

                                                                         
Query: 296   ccttgaagggaccctccatgtaaccccagtgccggaacttgaaggcgatcctgggagctg 355
             |||||||||| ||||||||||| |||||||| |||||||||||| ||||||       ||
Sbjct: 93396 ccttgaagggcccctccatgtacccccagtgtcggaacttgaagacgatccg------tg 93449

                                                                         
Query: 356   gcgggccgctgtagacgtccagcacctcgatggcgaagccccgggggaacgccgtgagga 415
             | || || ||||||||||| |||||||||||||| ||||| || ||||||||||| | ||
Sbjct: 93450 gtggaccactgtagacgtcgagcacctcgatggcaaagccacgcgggaacgccgtcaaga 93509

                                                                         
Query: 416   acgtggacgtcgccgactcgaccgactccgcctccgggtcgtagatgcggtgctccggcg 475
             |||||| | |  | ||||| | || |||    |||||||| |||||||||||||||||||
Sbjct: 93510 acgtggccatgccggactccagcgtctcattgtccgggtcatagatgcggtgctccggcg 93569

                                                                
Query: 476   gcagcgtggtcgccaggaacgcgttgtagccgcccatggccatgacctcct 526
             ||||  | |||  ||||||||||||||||||||| || ||||| |||||||
Sbjct: 93570 gcagtttcgtctgcaggaacgcgttgtagccgccgatagccatcacctcct 93620



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Plus

                                                                         
Query: 579   gacgctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgag 638
             ||||||||||||||||||||| |||||||||||||  | |||||||||||||||||| ||
Sbjct: 94026 gacgctcttctggtcctcgggtcgcaccttgtggatgagctccatctcccaggtcttcag 94085

                               
Query: 639   caaccgctgcaccttctc 656
             ||||| ||| ||||||||
Sbjct: 94086 caacctctggaccttctc 94103



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                         
Query: 583   ctcttctggtcctcgggacgcaccttgtggaccatctccatctcccaggtcttgagcaac 642
             |||||||||||||| || |||||||||||||| | |||||||||||||||||| ||||| 
Sbjct: 76993 ctcttctggtcctctggtcgcaccttgtggacgagctccatctcccaggtcttcagcaat 76934

                           
Query: 643   cgctgcaccttctc 656
             | ||| ||||||||
Sbjct: 76933 ctctggaccttctc 76920



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 151   gcagaagcagccggcgcagtcaagaagctcgcgaggaagttgccacgctcgtagaagaac 210
             |||| |||||| |||||  ||||||||||||||||||| ||||| || ||||||||||| 
Sbjct: 77956 gcagcagcagcaggcgcgctcaagaagctcgcgaggaaattgccgcgttcgtagaagaat 77897

                                             
Query: 211   tctgccttctccaccttgatgtcctcatcaac 242
             || |||||||| ||||| || ||||| |||||
Sbjct: 77896 tccgccttctcaaccttcatctcctcgtcaac 77865



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                         
Query: 170   tcaagaagctcgcgaggaagttgccacgctcgtagaagaactctgccttctccaccttga 229
             ||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||||| |
Sbjct: 92747 tcaagaagctcgcgaggaaattgccgcgctcgtagaagtactccgtcttctccaccttca 92806

                    
Query: 230   tgtcctc 236
             | |||||
Sbjct: 92807 tctcctc 92813
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>ref|NM_191890.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 291 gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
           |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 525 gtggcccttgtaggggccgtccatgtgtccccagtgccggaacttgaa 478
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>ref|NM_191889.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 801

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 291 gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
           |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 531 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 484
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>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0435H01
          Length = 160141

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 291    gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
              |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 142468 gtggcccttgtaggggccgtccatgtgtccccagtgccggaacttgaa 142515



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                              
Query: 291    gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
              |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 134446 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 134493
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>dbj|AK109409.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D12, full
           insert sequence
          Length = 1128

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 291 gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
           |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 597 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 550
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>dbj|AK106037.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D09, full
           insert sequence
          Length = 1086

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 291 gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
           |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 592 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 545
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>dbj|AK061471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E01, full
           insert sequence
          Length = 1086

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 291 gtggcccttgaagggaccctccatgtaaccccagtgccggaacttgaa 338
           |||||||||| |||| || |||||||  ||||||||||||||||||||
Sbjct: 592 gtggcccttgtaggggccgtccatgtggccccagtgccggaacttgaa 545
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>ref|XM_848999.1| PREDICTED: Canis familiaris similar to RIC3 protein (LOC611343),
           mRNA
          Length = 1163

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 277 ccaccgtgcggagggtggccct 298
           ||||||||||||||||||||||
Sbjct: 34  ccaccgtgcggagggtggccct 55
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>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 6     tctttttattgatttaaatatt 27
             ||||||||||||||||||||||
Sbjct: 85527 tctttttattgatttaaatatt 85506
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>gb|AC008513.7|AC008513 Homo sapiens chromosome 5 clone CTC-455C23, complete sequence
          Length = 224058

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 1      aaaaatctttttattgatttaaatat 26
              |||||||||||||||||| |||||||
Sbjct: 202158 aaaaatctttttattgatgtaaatat 202183
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 216     cttctccaccttgatgtcctc 236
               |||||||||||||||||||||
Sbjct: 1330606 cttctccaccttgatgtcctc 1330586
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>ref|XM_369537.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05927.4) partial mRNA
          Length = 729

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 355 ggcgggccgctgtagacgtccagcacctc 383
           ||||||||||||||||| || ||||||||
Sbjct: 455 ggcgggccgctgtagacctcgagcacctc 427
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>emb|BX648301.1|HSM808449 Homo sapiens mRNA; cDNA DKFZp686K04125 (from clone DKFZp686K04125)
          Length = 5843

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 5   atctttttattgatttaaata 25
           |||||||||||||||||||||
Sbjct: 558 atctttttattgatttaaata 578
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>gb|AC116339.2| Homo sapiens chromosome 5 clone RP11-1006G2, complete sequence
          Length = 74705

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 5     atctttttattgatttaaata 25
             |||||||||||||||||||||
Sbjct: 45748 atctttttattgatttaaata 45768
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>dbj|AK131908.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310014H11 product:hypothetical protein,
           full insert sequence
          Length = 750

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 329 ggaacttgaaggcgatcctgg 349
           |||||||||||||||||||||
Sbjct: 271 ggaacttgaaggcgatcctgg 291
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>dbj|AK131907.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
           library, clone:2310012G20 product:hypothetical protein,
           full insert sequence
          Length = 750

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 329 ggaacttgaaggcgatcctgg 349
           |||||||||||||||||||||
Sbjct: 271 ggaacttgaaggcgatcctgg 291
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>gb|AC010259.7| Homo sapiens chromosome 5 clone CTC-454M9, complete sequence
          Length = 195476

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      atctttttattgatttaaata 25
              |||||||||||||||||||||
Sbjct: 182633 atctttttattgatttaaata 182613
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>gb|AC007560.4| Homo sapiens BAC clone RP11-386G20 from 2, complete sequence
          Length = 124185

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 10    tttattgatttaaatatttct 30
             |||||||||||||||||||||
Sbjct: 91753 tttattgatttaaatatttct 91733
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 449   ccgggtcgtagatgcggtgct 469
             |||||||||||||||||||||
Sbjct: 64012 ccgggtcgtagatgcggtgct 63992
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>ref|NM_001033280.1| Mus musculus gene model 94, (NCBI) (Gm94), mRNA
          Length = 750

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 329 ggaacttgaaggcgatcctgg 349
           |||||||||||||||||||||
Sbjct: 271 ggaacttgaaggcgatcctgg 291
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>emb|AJ970646.1| Candidatus Phytoplasma solani hcaD pseudogene, clone SR0021 and
           SDH0013
          Length = 1326

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 11  ttattgatttaaatatttctt 31
           |||||||||||||||||||||
Sbjct: 363 ttattgatttaaatatttctt 343
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>gb|AF486557.1| Campylobacter jejuni strain 81116 HsdR (hsdR) gene, hsdR-1 allele,
            complete cds; RloA (rloA) and RloB (rloB) genes, complete
            cds; HsdS (hsdS) gene, hsdS-1 allele, complete cds; and
            HsdM (hsdM) gene, hsdM-1 allele, complete cds
          Length = 7343

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    aaaaatctttttattgatttaaata 25
            ||||||||||| |||||||||||||
Sbjct: 3943 aaaaatcttttaattgatttaaata 3919
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>gb|AF486553.1| Campylobacter jejuni strain RM1861 HsdR (hsdR) gene, hsdR-1 allele,
            complete cds; RloA (rloA) and RloB (rloB) genes, complete
            cds; HsdS (hsdS) gene, hsdS-1 allele, complete cds; and
            HsdM (hsdM) gene, hsdM-1 allele, complete cds
          Length = 7299

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    aaaaatctttttattgatttaaata 25
            ||||||||||| |||||||||||||
Sbjct: 3928 aaaaatcttttaattgatttaaata 3904
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>gb|AF486546.1| Campylobacter jejuni strain RM1049 HsdR (hsdR) gene, hsdR-1 allele,
            complete cds; RloA (rloA) and RloB (rloB) genes, complete
            cds; HsdS (hsdS) gene, hsdS-1 allele, complete cds; and
            HsdM (hsdM) gene, hsdM-1 allele, complete cds
          Length = 7299

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 1    aaaaatctttttattgatttaaata 25
            ||||||||||| |||||||||||||
Sbjct: 3929 aaaaatcttttaattgatttaaata 3905
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>gb|AC104867.18| Mus musculus chromosome 18, clone RP24-320L19, complete sequence
          Length = 148876

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 329   ggaacttgaaggcgatcctgg 349
             |||||||||||||||||||||
Sbjct: 67981 ggaacttgaaggcgatcctgg 67961
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 471     cggcggcagcgtggtcgccag 491
               |||||||||||||||||||||
Sbjct: 1225151 cggcggcagcgtggtcgccag 1225171



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     acgccgaagaactcgacgcg 275
               ||||||||||||||||||||
Sbjct: 1787257 acgccgaagaactcgacgcg 1787238
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>gb|CP000014.1| Borrelia garinii PBi plasmid cp26, complete sequence
          Length = 27108

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 4    aatctttttattgatttaaa 23
            ||||||||||||||||||||
Sbjct: 2342 aatctttttattgatttaaa 2361
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 468     ctccggcggcagcgtggtcgccag 491
               ||||||| ||||||||||||||||
Sbjct: 1772225 ctccggccgcagcgtggtcgccag 1772248
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>ref|XM_415333.1| PREDICTED: Gallus gallus similar to butyrophilin 1, B locus - chicken
            (fragment) (LOC417045), mRNA
          Length = 2679

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 579  gacgctcttctggtcctcgg 598
            ||||||||||||||||||||
Sbjct: 1143 gacgctcttctggtcctcgg 1124
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>gb|AE007307.1| Sinorhizobium meliloti 1021 plasmid pSymA section 113 of 121 of the
            complete plasmid sequence
          Length = 10192

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 257  cgccgaagaactcgacgcgc 276
            ||||||||||||||||||||
Sbjct: 1260 cgccgaagaactcgacgcgc 1279
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>gb|AC146699.5| Mus musculus chromosome 6, clone RP24-211G11, complete sequence
          Length = 86901

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctgccttctccaccttgatg 231
             ||||||||||||||||||||
Sbjct: 28515 ctgccttctccaccttgatg 28534
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>gb|AC092590.2| Homo sapiens BAC clone RP11-45K3 from 7, complete sequence
          Length = 127836

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ttttattgatttaaatattt 28
             ||||||||||||||||||||
Sbjct: 10870 ttttattgatttaaatattt 10851
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>emb|CR671033.2|CNS0FGQN Tetraodon nigroviridis full-length cDNA
          Length = 1346

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   aaaaatctttttattgattt 20
           ||||||||||||||||||||
Sbjct: 876 aaaaatctttttattgattt 857
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>emb|AJ748131.1| Streptomyces ribosidificus ribostamycin biosynthetic gene cluster
          Length = 31892

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tagacgtccagcacctcgat 386
             ||||||||||||||||||||
Sbjct: 11822 tagacgtccagcacctcgat 11841
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>emb|AL591215.12| Human DNA sequence from clone RP11-20D12 on chromosome 9 Contains the
             3' end of a novel gene, possible ortholog of mouse RIKEN
             cDNA 1700028P14 gene, complete sequence
          Length = 154592

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     tttttattgatttaaatatt 27
             ||||||||||||||||||||
Sbjct: 33922 tttttattgatttaaatatt 33941
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>emb|AL445929.5| Human DNA sequence from clone RP11-408M7 on chromosome 13 Contains a CpG
              island, complete sequence
          Length = 169403

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    tccaccttgatgtcctcatc 239
              ||||||||||||||||||||
Sbjct: 114071 tccaccttgatgtcctcatc 114090
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>emb|AL359543.13| Human DNA sequence from clone RP11-98O1 on chromosome 1 Contains part
             of the DISC1 gene for disrupted in schizophrenia 1 and a
             novel gene, complete sequence
          Length = 98151

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 530   gcgtcagtggcttcagcccg 549
             ||||||||||||||||||||
Sbjct: 74851 gcgtcagtggcttcagcccg 74870
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>emb|AL359081.10| Human DNA sequence from clone RP11-541F9 on chromosome 1, complete
             sequence
          Length = 109288

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     ctttttattgatttaaatat 26
             ||||||||||||||||||||
Sbjct: 67745 ctttttattgatttaaatat 67726
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 482   tggtcgccaggaacgcgttg 501
             ||||||||||||||||||||
Sbjct: 10982 tggtcgccaggaacgcgttg 10963
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 174   gaagctcgcgaggaagttgccacgctcg 201
             |||| |||||||||||||| ||||||||
Sbjct: 31459 gaagatcgcgaggaagttggcacgctcg 31486
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>emb|BX294371.15| Zebrafish DNA sequence from clone CH211-263B6 in linkage group 5,
             complete sequence
          Length = 152696

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 8     tttttattgatttaaatatttctt 31
             |||||||| |||||||||||||||
Sbjct: 86648 tttttatttatttaaatatttctt 86625
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>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaaaatctttttattgattt 20
              ||||||||||||||||||||
Sbjct: 118518 aaaaatctttttattgattt 118537
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 482     tggtcgccaggaacgcgttg 501
               ||||||||||||||||||||
Sbjct: 1785538 tggtcgccaggaacgcgttg 1785557
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>gb|AC007471.4|AC007471 Drosophila melanogaster, chromosome 2R, region 44F-45A, BAC clone
             BACR02C23, complete sequence
          Length = 168601

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     tttttattgatttaaatatttctt 31
             ||||||||||||||| ||||||||
Sbjct: 71909 tttttattgatttaattatttctt 71932
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>gb|AE004922.1| Pseudomonas aeruginosa PAO1, section 483 of 529 of the complete
            genome
          Length = 11099

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 477  cagcgtggtcgccaggaacg 496
            ||||||||||||||||||||
Sbjct: 9754 cagcgtggtcgccaggaacg 9773
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>emb|AL732577.5| Zebrafish DNA sequence from clone RP71-1M10, complete sequence
          Length = 107508

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     tttttattgatttaaatatttctt 31
             |||||| |||||||||||||||||
Sbjct: 64162 tttttaatgatttaaatatttctt 64185
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>gb|AE003835.4| Drosophila melanogaster chromosome 2R, section 15 of 73 of the complete
             sequence
          Length = 271696

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     tttttattgatttaaatatttctt 31
             ||||||||||||||| ||||||||
Sbjct: 85029 tttttattgatttaattatttctt 85052
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 442    tccgcctccgggtcgtagatgcgg 465
              |||||||||||||||| |||||||
Sbjct: 902699 tccgcctccgggtcgtcgatgcgg 902722
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>emb|AJ744850.1| Streptomyces ribosidificus ribostamycin biosynthesis gene cluster,
             strain NRRL B-11466
          Length = 43190

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   tagacgtccagcacctcgat 386
             ||||||||||||||||||||
Sbjct: 17553 tagacgtccagcacctcgat 17572
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>gb|AC132400.3| Mus musculus BAC clone RP23-400A19 from 1, complete sequence
          Length = 218935

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 613    accatctccatctcccaggtcttg 636
              |||||||||||||||||| |||||
Sbjct: 102094 accatctccatctcccagctcttg 102071
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>emb|CR933002.7| Zebrafish DNA sequence from clone DKEY-246A18 in linkage group 1,
             complete sequence
          Length = 31933

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ttttattgatttaaatattt 28
             ||||||||||||||||||||
Sbjct: 24702 ttttattgatttaaatattt 24721
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>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   ctctgccttctccaccttga 229
             ||||||||||||||||||||
Sbjct: 88728 ctctgccttctccaccttga 88709
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>emb|AL670360.8| Mouse DNA sequence from clone RP23-3A4 on chromosome X, complete
             sequence
          Length = 183543

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaaatctttttattgattt 20
             ||||||||||||||||||||
Sbjct: 88937 aaaaatctttttattgattt 88956
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>dbj|D17389.1|DRORYRH Drosophila melanogaster DNA for ryanodine receptor homologue, complete
             cds
          Length = 25680

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 8     tttttattgatttaaatatttctt 31
             ||||||||||||||| ||||||||
Sbjct: 16232 tttttattgatttaattatttctt 16255
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>dbj|AB017464.1| Carabus hortensis mitochondrial ND5 gene, isolate: Trencin Slovakia,
            partial cds
          Length = 1083

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    ttttattgatttaaatattt 28
            ||||||||||||||||||||
Sbjct: 1056 ttttattgatttaaatattt 1075


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,240,642
Number of Sequences: 3902068
Number of extensions: 5240642
Number of successful extensions: 119740
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119072
Number of HSP's gapped (non-prelim): 667
length of query: 658
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 635
effective length of database: 17,143,297,704
effective search space: 10885994042040
effective search space used: 10885994042040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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