| Clone Name | rbags18l23 |
|---|---|
| Clone Library Name | barley_pub |
>SPL16_ARATH (Q700C2) Squamosa promoter-binding-like protein 16 (SPL1-related| protein 3) Length = 988 Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/66 (40%), Positives = 32/66 (48%) Frame = -2 Query: 634 RSCSQCAILESGLLRRPMRSRGLLARPYIHSMLAIAAXXXXXXVFMRALLRFNSGRTFKW 455 RSC+ CA + R+ SR L P IHSMLA+A VFM A G F W Sbjct: 921 RSCNTCASVALKYQRKVSGSRRLFPTPIIHSMLAVATVCVCVCVFMHAFPMVRQGSHFSW 980 Query: 454 ERLDFG 437 LD+G Sbjct: 981 GGLDYG 986
>SPL14_ARATH (Q8RY95) Squamosa promoter-binding-like protein 14 (SPL1-related| protein 2) Length = 1035 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/65 (40%), Positives = 31/65 (47%) Frame = -2 Query: 631 SCSQCAILESGLLRRPMRSRGLLARPYIHSMLAIAAXXXXXXVFMRALLRFNSGRTFKWE 452 SC+ CA + RR S+ L P IHSMLA+A VFM A G F W Sbjct: 969 SCASCATVALKYQRRVSGSQRLFPTPIIHSMLAVATVCVCVCVFMHAFPIVRQGSHFSWG 1028 Query: 451 RLDFG 437 LD+G Sbjct: 1029 GLDYG 1033
>ADO1_ARATH (Q94BT6) Adagio protein 1 (Protein ZEITLUPE) (LOV kelch protein 1)| (Flavin-binding kelch repeat F-box protein 1-like protein 2) (FKF1-like protein 2) (F-box only protein 2b) (FBX2b) (Clock-associated PAS protein ZTL) Length = 609 Score = 32.7 bits (73), Expect = 0.99 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 185 AKRKTWAELAHSFVMREEAT-RALSMSGAIRQRQQ*FCG*SVSNPLFLFAGVSVNL 21 AKR W LA E A R LS+ G++ + F +V N + LF G VN+ Sbjct: 260 AKRLGWGRLARELTTLEAAAWRKLSVGGSVEPSRCNFSACAVGNRVVLFGGEGVNM 315
>ADO2_ARATH (Q8W420) Adagio protein 2 (LOV kelch protein 2) (Flavin-binding| kelch repeat F-box protein 1-like protein 1) (FKF1-like protein 1) (F-box only protein 2c) (FBX2c) Length = 611 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = -1 Query: 185 AKRKTWAELAHSFVMREE-ATRALSMSGAIRQRQQ*FCG*SVSNPLFLFAGVSVNL 21 AKR W LA F E A R S+ G + + F +V N + +F G VN+ Sbjct: 261 AKRIGWVRLAREFTTHEATAWRKFSVGGTVEPSRCNFSACAVGNRIVIFGGEGVNM 316
>NMCP_ARATH (Q9FLH0) Putative nuclear matrix constituent protein 1-like protein| (NMCP1-like) Length = 1042 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = -2 Query: 310 PWLWMVKCNSCMDKTLPEESVGMWG*SSASKGRVENQEKGGLPKEKL 170 P+ W+ +C + + KT PE+S M +E+GG+P EKL Sbjct: 842 PFSWIKRCTNLIFKTSPEKSTLMH----------HYEEEGGVPSEKL 878
>ATPE_RICPR (Q9ZCF3) ATP synthase epsilon chain (EC 3.6.3.14) (ATP synthase F1| sector epsilon subunit) Length = 112 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/73 (27%), Positives = 35/73 (47%) Frame = +3 Query: 240 HIPTLSSGKVLSMQLLHFTIHNHGQNSMESGAVKSNLVPHPLVLVR*FLNNITQLSNTAF 419 H+P + + K +Q+ + IHN+ + SG V + + H + +V N+T LS + Sbjct: 39 HVPMIVNLKAGLVQIYIYNIHNYENTYLISGGV-TEITSHYINIVTEVAINVTNLSESEI 97 Query: 420 SNV*VGPKSNLSH 458 S + LSH Sbjct: 98 STQRYELQKLLSH 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,352,963 Number of Sequences: 219361 Number of extensions: 2219450 Number of successful extensions: 4692 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4692 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)