>gb|AC122896.4| Mus musculus BAC clone RP23-69N8 from chromosome 10, complete sequence
          Length = 232473

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 640   ctggcttgagatccttgtgtgttctgt 666
             ||||||||||||||| |||||||||||
Sbjct: 76138 ctggcttgagatcctggtgtgttctgt 76164

>gb|AC079444.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-395k5, complete
             sequence
          Length = 171451

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 640   ctggcttgagatccttgtgtgttctgt 666
             ||||||||||||||| |||||||||||
Sbjct: 35788 ctggcttgagatcctggtgtgttctgt 35762

>gb|AC146698.10| Mus musculus chromosome 13, clone RP24-342B2, complete sequence
          Length = 122164

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 170   ttggaagagcagctgaatatat 191
             ||||||||||||||||||||||
Sbjct: 53832 ttggaagagcagctgaatatat 53811

>emb|AL353811.12| Human DNA sequence from clone RP11-482I10 on chromosome 9, complete
              sequence
          Length = 190651

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 114    attggatggtacttaaaatgca 135
              ||||||||||||||||||||||
Sbjct: 185687 attggatggtacttaaaatgca 185666

>gb|AC025480.7| Homo sapiens chromosome 18, clone RP11-12N19, complete sequence
          Length = 169594

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 318    ctgtttgcacattgacaagata 339
              ||||||||||||||||||||||
Sbjct: 152373 ctgtttgcacattgacaagata 152394

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 449      acgagtaattcctactgctaatctga 474
                |||||||||||||| |||||||||||
Sbjct: 24793546 acgagtaattcctagtgctaatctga 24793571

>gb|AC155263.2| Mus musculus BAC clone RP23-415I11 from chromosome 13, complete
             sequence
          Length = 202801

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 170   ttggaagagcagctgaatatat 191
             ||||||||||||||||||||||
Sbjct: 48641 ttggaagagcagctgaatatat 48620

>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0072A21
          Length = 158287

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 449  acgagtaattcctactgctaatctga 474
            |||||||||||||| |||||||||||
Sbjct: 4629 acgagtaattcctagtgctaatctga 4654

>dbj|AP004680.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0029G06
          Length = 169711

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 449    acgagtaattcctactgctaatctga 474
              |||||||||||||| |||||||||||
Sbjct: 127227 acgagtaattcctagtgctaatctga 127252

>gb|DQ214785.1| Taeniopygia guttata clone 0058P0039G04
           coiled-coil-helix-coiled-coil-helix domain containing 2
           variant 1-like mRNA, complete sequence
          Length = 885

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 346 tcttcagcagactccttgtgc 366
           |||||||||||||||||||||
Sbjct: 584 tcttcagcagactccttgtgc 564

>gb|AY591736.1| Mus musculus clone IgKVk4-91 immunoglobulin kappa-like gene, partial
            sequence
          Length = 2501

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 528  ggaaaagcaagggagagagacagag 552
            |||||||||||||||||||| ||||
Sbjct: 1123 ggaaaagcaagggagagagagagag 1099

>gb|AC136710.8| Mus musculus chromosome 19, clone RP23-35B13, complete sequence
          Length = 206056

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 658   gtgttctgttcaggtaaatct 678
             |||||||||||||||||||||
Sbjct: 22323 gtgttctgttcaggtaaatct 22343

>gb|AC113030.5| Mus musculus chromosome 6, clone RP23-211L5, complete sequence
          Length = 187655

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 528    ggaaaagcaagggagagagacagag 552
              |||||||||||||||||||| ||||
Sbjct: 158765 ggaaaagcaagggagagagagagag 158741

>emb|AL606724.17| Mouse DNA sequence from clone RP23-285D3 on chromosome 11 Contains part
             of a novel gene, a heat shock protein (Hsp) pseudogene and
             a CpG island, complete sequence
          Length = 160470

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 531   aaagcaagggagagagacaga 551
             |||||||||||||||||||||
Sbjct: 59940 aaagcaagggagagagacaga 59960

>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 59     gcactgttgcaagctaaagac 79
              |||||||||||||||||||||
Sbjct: 122421 gcactgttgcaagctaaagac 122441

>emb|AL117188.1|ATF15J1 Arabidopsis thaliana DNA chromosome 4, BAC clone F15J1, partial
             sequence (ESSA project)
          Length = 27408

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 59    gcactgttgcaagctaaagac 79
             |||||||||||||||||||||
Sbjct: 24069 gcactgttgcaagctaaagac 24089

>emb|AL031135.1|ATF8D20 Arabidopsis thaliana DNA chromosome 4, BAC clone F8D20 (ESSAII
            project)
          Length = 94315

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 59   gcactgttgcaagctaaagac 79
            |||||||||||||||||||||
Sbjct: 1661 gcactgttgcaagctaaagac 1681

>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence
          Length = 237498

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 531    aaagcaagggagagagacaga 551
              |||||||||||||||||||||
Sbjct: 168622 aaagcaagggagagagacaga 168642

>gb|AC093255.2| Homo sapiens chromosome 5 clone RP11-181G6, complete sequence
          Length = 95597

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    gagatttatttaacatgcaga 112
             |||||||||||||||||||||
Sbjct: 44574 gagatttatttaacatgcaga 44554

>gb|AC091931.2| Homo sapiens chromosome 5 clone RP11-313L6, complete sequence
          Length = 185844

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 92  gagatttatttaacatgcaga 112
           |||||||||||||||||||||
Sbjct: 410 gagatttatttaacatgcaga 430

>gb|AC155922.1| Mus musculus BAC clone RP24-501E5 from 12, complete sequence
          Length = 169610

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 187   tatatgtgtatgttttctgta 207
             |||||||||||||||||||||
Sbjct: 89707 tatatgtgtatgttttctgta 89687

>emb|AL845539.12| Mouse DNA sequence from clone RP23-263O6 on chromosome 2, complete
             sequence
          Length = 177800

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   ttgtgtcttcagcagactcct 361
             |||||||||||||||||||||
Sbjct: 33070 ttgtgtcttcagcagactcct 33090

>emb|AJ231229.1|MMU231229 Mus musculus IgVk kf4 gene
          Length = 786

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 528 ggaaaagcaagggagagagacagag 552
           |||||||||||||||||||| ||||
Sbjct: 372 ggaaaagcaagggagagagagagag 348

>emb|AL604023.12| Mouse DNA sequence from clone RP23-468D17 on chromosome 11, complete
             sequence
          Length = 225399

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gcagagtctgaagctctgctc 153
             |||||||||||||||||||||
Sbjct: 80622 gcagagtctgaagctctgctc 80642


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,375,798
Number of Sequences: 3902068
Number of extensions: 7375798
Number of successful extensions: 157938
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 157838
Number of HSP's gapped (non-prelim): 100
length of query: 741
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 718
effective length of database: 17,143,297,704
effective search space: 12308887751472
effective search space used: 12308887751472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)