Clone Information

BLAST Search Result

Clone Name	rbags19a22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloropl...	342	8e-94
2	PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloropl...	340	2e-93
3	PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloropl...	336	4e-92
4	PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloropl...	336	4e-92
5	PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplas...	330	2e-90
6	PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloropl...	330	3e-90
7	PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloropl...	329	5e-90
8	PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chlor...	327	3e-89
9	PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chlor...	321	1e-87
10	PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloropl...	241	1e-63
11	PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloropl...	240	3e-63
12	PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloropl...	236	5e-62
13	PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypep...	200	3e-51
14	PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypep...	188	1e-47
15	PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypep...	188	1e-47
16	PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypep...	185	1e-46
17	PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypep...	184	3e-46
18	PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypep...	178	1e-44
19	PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (3...	40	0.005
20	CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES pro...	34	0.36
21	MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog	31	3.1
22	DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta...	31	4.0
23	RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)	30	5.2
24	RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Prote...	30	5.2
25	MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial pre...	30	6.8
26	METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2....	30	6.8
27	H1_EUPES (Q9M5W4) Histone H1	30	8.9
28	LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA	30	8.9

>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  342 bits (876), Expect = 8e-94
 Identities = 167/186 (89%), Positives = 175/186 (94%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AEGI KN PP FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGG
Sbjct: 144 AEGINKNAPPEFQKTKLMTRLTYTLDEIEGPFEVAPDGTVKFEEKDGIDYAAVTVQLPGG 203

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVALPAGGRGD
Sbjct: 204 ERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVALPAGGRGD 263

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPKDVKIQG+
Sbjct: 264 EEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPKDVKIQGI 323

Query: 141 WYAQLE 124
           WYAQLE
Sbjct: 324 WYAQLE 329

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>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  340 bits (873), Expect = 2e-93
 Identities = 166/186 (89%), Positives = 175/186 (94%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AE + KN PP FQKTKLMTRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPGG
Sbjct: 147 AESVNKNAPPDFQKTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGG 206

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 207 ERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+
Sbjct: 267 EEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGI 326

Query: 141 WYAQLE 124
           WYAQLE
Sbjct: 327 WYAQLE 332

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>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  336 bits (861), Expect = 4e-92
 Identities = 164/186 (88%), Positives = 173/186 (93%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AEG+ KN  P FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGG
Sbjct: 144 AEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGG 203

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 204 ERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 263

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PKDVKIQG+
Sbjct: 264 EEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPKDVKIQGI 323

Query: 141 WYAQLE 124
           WYAQLE
Sbjct: 324 WYAQLE 329

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>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 325

 Score =  336 bits (861), Expect = 4e-92
 Identities = 175/188 (93%), Positives = 176/188 (93%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AEGIQKNEPP FQKTKLMTRLTYTLDEMEGPLEV    TLKFEEKDGIDYAAVTVQLPGG
Sbjct: 141 AEGIQKNEPPRFQKTKLMTRLTYTLDEMEGPLEVRRRRTLKFEEKDGIDYAAVTVQLPGG 200

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERV FLFTVKQLVATGKPESF  PFLVPSYRGSSFLDPKGRGGSTGYDNA ALP GGRGD
Sbjct: 201 ERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGALPRGGRGD 259

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL  +APKDVKIQGV
Sbjct: 260 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPKDVKIQGV 317

Query: 141 WYAQLESN 118
           WYAQLESN
Sbjct: 318 WYAQLESN 325

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>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 329

 Score =  330 bits (846), Expect = 2e-90
 Identities = 162/187 (86%), Positives = 175/187 (93%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           +EG+ KN P AFQ TKLMTRLTYTLDE+EGP EV ADG++KFEEKDGIDYAAVTVQLPGG
Sbjct: 143 SEGVTKNTPLAFQNTKLMTRLTYTLDEIEGPFEVSADGSVKFEEKDGIDYAAVTVQLPGG 202

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVALPAGGRGD
Sbjct: 203 ERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVALPAGGRGD 262

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPKDVKIQGV
Sbjct: 263 EEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPKDVKIQGV 322

Query: 141 WYAQLES 121
           WYAQLES
Sbjct: 323 WYAQLES 329

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>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 333

 Score =  330 bits (845), Expect = 3e-90
 Identities = 161/187 (86%), Positives = 171/187 (91%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AEG+ KN  P FQKTKLMTRLTYTLDE+EGP EV  DGT+KFEEKDGIDYAAVTVQLPGG
Sbjct: 147 AEGVSKNSAPDFQKTKLMTRLTYTLDEIEGPFEVSPDGTVKFEEKDGIDYAAVTVQLPGG 206

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFT+KQLVA+GKPESFS  FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 207 ERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PKDVKIQG+
Sbjct: 267 EEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPKDVKIQGI 326

Query: 141 WYAQLES 121
           WYAQLES
Sbjct: 327 WYAQLES 333

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>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1) (33 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid
           membrane protein)
          Length = 332

 Score =  329 bits (843), Expect = 5e-90
 Identities = 162/186 (87%), Positives = 171/186 (91%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           AEGI KN  P FQ TKLMTRLTYTLDE+EGP EV +DGT+KFEEKDGIDYAAVTVQLPGG
Sbjct: 145 AEGISKNSGPDFQNTKLMTRLTYTLDEIEGPFEVSSDGTVKFEEKDGIDYAAVTVQLPGG 204

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 205 ERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 264

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PKDVKI+GV
Sbjct: 265 EEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPKDVKIEGV 324

Query: 141 WYAQLE 124
           WYAQLE
Sbjct: 325 WYAQLE 330

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>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 331

 Score =  327 bits (837), Expect = 3e-89
 Identities = 157/186 (84%), Positives = 172/186 (92%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           A+ + KN PP FQ TKLMTRLTYTLDE+EGP EVG+DG++KF+E+DGIDYAAVTVQLPGG
Sbjct: 146 ADSVSKNAPPDFQNTKLMTRLTYTLDEIEGPFEVGSDGSVKFKEEDGIDYAAVTVQLPGG 205

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 206 ERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 265

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGV
Sbjct: 266 EEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGV 325

Query: 141 WYAQLE 124
           WY Q+E
Sbjct: 326 WYGQIE 331

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>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast|
           precursor (OEE1) (33 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 33 kDa subunit) (33 kDa
           thylakoid membrane protein)
          Length = 332

 Score =  321 bits (822), Expect = 1e-87
 Identities = 155/186 (83%), Positives = 169/186 (90%)
 Frame = -2

Query: 681 AEGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGG 502
           A+ + KN PP FQ TKLMTRLTYTLDE+EGP EV +DG++ F+E+DGIDYAAVTVQLPGG
Sbjct: 147 ADSVSKNAPPEFQNTKLMTRLTYTLDEIEGPFEVASDGSVNFKEEDGIDYAAVTVQLPGG 206

Query: 501 ERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 322
           ERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD
Sbjct: 207 ERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD 266

Query: 321 EEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGV 142
           EEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PKDVKIQGV
Sbjct: 267 EEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPKDVKIQGV 326

Query: 141 WYAQLE 124
           WY QLE
Sbjct: 327 WYGQLE 332

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>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 293

 Score =  241 bits (615), Expect = 1e-63
 Identities = 121/184 (65%), Positives = 139/184 (75%)
 Frame = -2

Query: 678 EGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGE 499
           E + K     F KTKLMTRLTYTLD M G L+VG+DG+ + +E+DGIDYAA TVQLPGGE
Sbjct: 110 ESVFKGGETEFVKTKLMTRLTYTLDAMSGTLKVGSDGSAELKEEDGIDYAATTVQLPGGE 169

Query: 498 RVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDE 319
           RV FLFT+KQ    G  ++  G F+VPSYRGSSFLDPKGRGGSTGYDNAVALPA  R D 
Sbjct: 170 RVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADA 227

Query: 318 EELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVW 139
           EEL KENVK+  +  G+   SV K    TGE+ GVFES+QPSDTDLGAK PKD+KI G+W
Sbjct: 228 EELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPKDIKITGLW 287

Query: 138 YAQL 127
           Y QL
Sbjct: 288 YGQL 291

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>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 291

 Score =  240 bits (612), Expect = 3e-63
 Identities = 120/175 (68%), Positives = 135/175 (77%)
 Frame = -2

Query: 648 FQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPFLFTVKQ 469
           F KTKLMTRLTYTLD M G  +VG+DG+ + +E DGIDYAA TVQLPGGERV FLFT+KQ
Sbjct: 119 FVKTKLMTRLTYTLDAMSGSFKVGSDGSAELKEDDGIDYAATTVQLPGGERVAFLFTIKQ 178

Query: 468 LVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKN 289
               G  +   G FLVPSYRGSSFLDPKGRGGSTGYDNAVALPA  R D EEL KENVK 
Sbjct: 179 FDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVALPA--RADAEELLKENVKI 236

Query: 288 ASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQLE 124
             +  G+   SV K  P TGE+ GVFES+QPSDTDLGAK PKD+K+ G+WYAQL+
Sbjct: 237 TKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPKDIKVTGLWYAQLK 291

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>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor|
           (OEE1)
          Length = 338

 Score =  236 bits (602), Expect = 5e-62
 Identities = 115/181 (63%), Positives = 137/181 (75%)
 Frame = -2

Query: 669 QKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVP 490
           +K +   F++TKLMTRLTYTLD +   L VG DG+   +EKDG+DYAA TVQL GGERVP
Sbjct: 156 EKQQVTEFERTKLMTRLTYTLDAISADLNVGGDGSWTIQEKDGLDYAATTVQLAGGERVP 215

Query: 489 FLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEEL 310
           FLFT+K L+A G    F G F VPSYRG++FLDPKGRGG++GYD AVALPA   GD+EE 
Sbjct: 216 FLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVALPAS--GDDEEY 273

Query: 309 AKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKIQGVWYAQ 130
           AKEN K+ ++S G I   V K   ETGE+ GVFES+QPSDTDLGAK PKD+K  GVWYAQ
Sbjct: 274 AKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPKDIKTSGVWYAQ 333

Query: 129 L 127
           +
Sbjct: 334 I 334

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>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 273

 Score =  200 bits (509), Expect = 3e-51
 Identities = 103/193 (53%), Positives = 132/193 (68%), Gaps = 8/193 (4%)
 Frame = -2

Query: 678 EGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGE 499
           E   K +   F   KL+TR T T+D++ G L+   D +L F EKDG+D+ A+TVQLPGGE
Sbjct: 83  EPANKRQTAEFVAGKLLTRYTSTIDQVSGDLKFNDDSSLTFVEKDGLDFQAITVQLPGGE 142

Query: 498 RVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 343
           RVPFLFT+K LVA  +P          F G F VPSYRG++FLDPKGRG  +GYDNAVAL
Sbjct: 143 RVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVSGYDNAVAL 202

Query: 342 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 163
           PA  + D+E+L + NVK A    G I+L + K    +GE+ G FES QPSDTDLGA  PK
Sbjct: 203 PA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDTDLGADEPK 260

Query: 162 DVKIQGVWYAQLE 124
           +VKI+G++YA++E
Sbjct: 261 EVKIRGIFYARVE 273

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>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  188 bits (477), Expect = 1e-47
 Identities = 100/189 (52%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
 Frame = -2

Query: 666 KNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPF 487
           K +   F  TKL+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ GGER+P 
Sbjct: 85  KRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPL 144

Query: 486 LFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 331
           LFTVK LVA+ +P          F G F VPSYR ++FLDPKGRG ++GYD+A+ALP   
Sbjct: 145 LFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP--- 201

Query: 330 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 151
           +  EEELA+ NVK  S + G I+L+V K    TGE+ G FES Q SD D+GA  P +VKI
Sbjct: 202 QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKI 261

Query: 150 QGVWYAQLE 124
           QGV+YA +E
Sbjct: 262 QGVFYASIE 270

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>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 272

 Score =  188 bits (477), Expect = 1e-47
 Identities = 100/189 (52%), Positives = 131/189 (69%), Gaps = 8/189 (4%)
 Frame = -2

Query: 666 KNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPF 487
           K +   F  TKL+TR T +LD+++G L+V +DG+L F E+DGID+  VTVQ+ GGER+P 
Sbjct: 85  KRQEAEFVPTKLVTRETTSLDQIQGELKVNSDGSLTFVEEDGIDFQPVTVQMAGGERIPL 144

Query: 486 LFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 331
           LFTVK LVA+ +P          F G F VPSYR ++FLDPKGRG ++GYD+A+ALP   
Sbjct: 145 LFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLASGYDSAIALP--- 201

Query: 330 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 151
           +  EEELA+ NVK  S + G I+L+V K    TGE+ G FES Q SD D+GA  P +VKI
Sbjct: 202 QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDDDMGAHEPHEVKI 261

Query: 150 QGVWYAQLE 124
           QGV+YA +E
Sbjct: 262 QGVFYASIE 270

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>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 275

 Score =  185 bits (470), Expect = 1e-46
 Identities = 99/192 (51%), Positives = 129/192 (67%), Gaps = 8/192 (4%)
 Frame = -2

Query: 678 EGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGE 499
           E + K +   +   KL+TR T +L+++ G + V  DG + F E+ GID+  VTVQLPGGE
Sbjct: 84  EPVNKRQEAEYVPGKLLTRYTTSLEQISGKITVDEDGVVTFYEEGGIDFQPVTVQLPGGE 143

Query: 498 RVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 343
           +VPF FT+K LV   +P          F G F VPSYRG++FLDPKGRG +TGYDNAVAL
Sbjct: 144 QVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLATGYDNAVAL 203

Query: 342 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 163
           PA    D+E+ A  NVK      G+I+L VTK    TGE+ GVF+S QPSDTDLGAK P 
Sbjct: 204 PA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDTDLGAKEPV 259

Query: 162 DVKIQGVWYAQL 127
           +VKI+G++YA++
Sbjct: 260 EVKIRGIFYARV 271

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>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 274

 Score =  184 bits (466), Expect = 3e-46
 Identities = 94/195 (48%), Positives = 126/195 (64%), Gaps = 8/195 (4%)
 Frame = -2

Query: 678 EGIQKNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGE 499
           E + K +   + K K++TR T +L+++ G + VGADGTL F+EKDGID+  +TV LPGGE
Sbjct: 84  EPVNKRQKAEYVKGKVLTRQTTSLEQIRGSIAVGADGTLTFKEKDGIDFQPITVLLPGGE 143

Query: 498 RVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 343
            VPF FTVK    T +P          F G F VPSYRG+ FLDPK RG  TGYDNAVAL
Sbjct: 144 EVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYTGYDNAVAL 203

Query: 342 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 163
           P+       +  + N K      G ++L VT+    TGE+ G+FES QPSDTDLGAK P 
Sbjct: 204 PSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDTDLGAKEPL 258

Query: 162 DVKIQGVWYAQLESN 118
           DVK++G++Y +++++
Sbjct: 259 DVKVRGIFYGRVDTD 273

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>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor|
           (MSP)
          Length = 277

 Score =  178 bits (452), Expect = 1e-44
 Identities = 97/189 (51%), Positives = 128/189 (67%), Gaps = 8/189 (4%)
 Frame = -2

Query: 666 KNEPPAFQKTKLMTRLTYTLDEMEGPLEVGADGTLKFEEKDGIDYAAVTVQLPGGERVPF 487
           K +   F   K++TR T +LD++ G L + ADGT+ F EK GID+ A+TV LPGGE VPF
Sbjct: 87  KRQKAEFVPGKVLTRYTSSLDQVYGDLALKADGTVSFTEKGGIDFQAITVLLPGGEEVPF 146

Query: 486 LFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGG 331
           LFTVK LVA T +P +         G + VPSYR S+FLDPK RG +TGY++AVA+P+  
Sbjct: 147 LFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTTGYESAVAIPSA- 205

Query: 330 RGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 151
            GD E+L KENVK   +  G I+L+V+K    TGEV GVF ++QPSDTD+G K   DVK+
Sbjct: 206 -GDAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDTDMGGKEAVDVKL 264

Query: 150 QGVWYAQLE 124
            G +Y ++E
Sbjct: 265 VGQFYGRIE 273

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>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit|
           of oxygen evolving system of photosystem II) (33 kDa
           thylakoid membrane protein) (Fragments)
          Length = 26

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = -2

Query: 387 KGRGGSTGYDNAVALPAGGR 328
           + +GGSTGYDNAVALPAGGR
Sbjct: 7   QSKGGSTGYDNAVALPAGGR 26

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>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 94

 Score = 34.3 bits (77), Expect = 0.36
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = -2

Query: 312 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 151
           +AKE  K      G +  SV K KP+TGEVI V E       + G K P +VKI
Sbjct: 13  VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60

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>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog|
          Length = 241

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = -2

Query: 351 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 175
           V   A G   EEE A+   K      G + L  T SKP+  EVIG FES VQ      GA
Sbjct: 72  VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129

Query: 174 KAP 166
            AP
Sbjct: 130 VAP 132

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>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 2)
          Length = 662

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 333 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 199
           G+  E   + +N+KN+     NI    T S PET E+I     +Q
Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449

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>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)|
          Length = 560

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -2

Query: 429 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 265
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 264 TLSVTKSKP 238
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)|
          Length = 536

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = -2

Query: 429 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 265
           F++   R  S L   G G + G   A  L AGGRGD     +E+   E  KNA  +   I
Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488

Query: 264 TLSVTKSKP 238
           T  + +  P
Sbjct: 489 TGHLEEPMP 497

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>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC|
           1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1)
          Length = 373

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = -2

Query: 201 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 70
           QP    +     KD+K++G W +Q + N S  E K  ILI C  IR
Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336

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>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase) (Fragment)
          Length = 319

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = -2

Query: 483 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 358
           F  + + A   PES +G  +VP Y+ S++   +G G  TGY+
Sbjct: 5   FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45

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>H1_EUPES (Q9M5W4) Histone H1|
          Length = 229

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 516 QLPGGERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 403
           QLP   R   LF +K+LVA+GK       F +PS R +
Sbjct: 86  QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123

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>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA|
          Length = 598

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +2

Query: 77  HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 256
           +A ++ IFT   +  D        W++ ++  +    V D  TL++ P   P+ G   V 
Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292

Query: 257 LRV---MLPVEEDAFFTF 301
            +V   + PV  D +  F
Sbjct: 293 PQVYAGLFPVSSDDYEAF 310


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,479,194
Number of Sequences: 219361
Number of extensions: 1386215
Number of successful extensions: 5676
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5657
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result