| Clone Name | rbags18l16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds Length = 983 Score = 1342 bits (677), Expect = 0.0 Identities = 700/709 (98%), Gaps = 1/709 (0%) Strand = Plus / Minus Query: 1 tatgatagaaataataaaatgaaaatn-taaatgagcacgtgagctagcagctcttattc 59 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 951 tatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattc 892 Query: 60 gggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtg 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 891 gggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtg 832 Query: 120 gatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 831 gatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgc 772 Query: 180 caccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 771 caccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttg 712 Query: 240 ctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 711 ctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagag 652 Query: 300 acgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttggga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 651 acgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttggga 592 Query: 360 gagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 591 gagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtga 532 Query: 420 tccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacat 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 531 tccactgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacat 472 Query: 480 gttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 471 gttcgactcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgc 412 Query: 540 cggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccga 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 411 cggtcatgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccga 352 Query: 600 cgtccacaagccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgacca 659 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 351 cgtccacaagccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgacca 292 Query: 660 ggatcacagagtgctgagccatggcattgtcgaacagtgttcccaaccg 708 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 ggatcacagagtgctgagccatggcattgtcgaacagtgttcccaaccg 243
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene, complete cds Length = 5238 Score = 787 bits (397), Expect = 0.0 Identities = 420/429 (97%), Gaps = 1/429 (0%) Strand = Plus / Minus Query: 1 tatgatagaaataataaaatgaaaatn-taaatgagcacgtgagctagcagctcttattc 59 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 4854 tatgatagaaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattc 4795 Query: 60 gggacattattcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtg 119 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4794 gggacattattcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtg 4735 Query: 120 gatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4734 gatgctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgc 4675 Query: 180 caccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4674 caccggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttg 4615 Query: 240 ctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagag 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4614 ctcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagag 4555 Query: 300 acgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttggga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4554 acgagtctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttggga 4495 Query: 360 gagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtga 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4494 gagcgttgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtga 4435 Query: 420 tccactgca 428 ||||||||| Sbjct: 4434 tccactgca 4426 Score = 438 bits (221), Expect = e-119 Identities = 221/221 (100%) Strand = Plus / Minus Query: 488 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591 Query: 548 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 3531 Query: 608 agccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcaca 667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3530 agccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcaca 3471 Query: 668 gagtgctgagccatggcattgtcgaacagtgttcccaaccg 708 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 3470 gagtgctgagccatggcattgtcgaacagtgttcccaaccg 3430 Score = 135 bits (68), Expect = 2e-28 Identities = 68/68 (100%) Strand = Plus / Minus Query: 424 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851 Query: 484 gactcctg 491 |||||||| Sbjct: 3850 gactcctg 3843
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| || |||||||| || || ||| |||| || || |||||||| Sbjct: 5364272 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 5364213 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||| Sbjct: 5364212 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 5364153 Query: 691 gaacag 696 |||||| Sbjct: 5364152 gaacag 5364147 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 132 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 191 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665 Query: 192 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 251 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605 Query: 252 gcacaaacatgatgatatccaaggtgaatgcatcccg 288 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| ||| |||||| | || || |||||||| | |||||||| || Sbjct: 5172100 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 5172041 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| | || ||||| | |||||||| |||||||| | ||| Sbjct: 5172040 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 5171981 Query: 691 gaacag 696 |||||| Sbjct: 5171980 gaacag 5171975 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Minus Query: 123 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 182 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356 Query: 183 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 242 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296 Query: 243 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 291 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 424 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 483 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 105645 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| || |||||||| || || ||| |||| || || |||||||| Sbjct: 36339 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 36280 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||| Sbjct: 36279 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 36220 Query: 691 gaacag 696 |||||| Sbjct: 36219 gaacag 36214 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 132 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 191 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732 Query: 192 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 251 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672 Query: 252 gcacaaacatgatgatatccaaggtgaatgcatcccg 288 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| || |||||||| || || ||| |||| || || |||||||| Sbjct: 5364261 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 5364202 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||| Sbjct: 5364201 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 5364142 Query: 691 gaacag 696 |||||| Sbjct: 5364141 gaacag 5364136 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Minus Query: 132 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 191 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654 Query: 192 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 251 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594 Query: 252 gcacaaacatgatgatatccaaggtgaatgcatcccg 288 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| ||| |||||| | || || |||||||| | |||||||| || Sbjct: 5172082 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 5172023 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| | || ||||| | |||||||| |||||||| | ||| Sbjct: 5172022 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 5171963 Query: 691 gaacag 696 |||||| Sbjct: 5171962 gaacag 5171957 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Minus Query: 123 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 182 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338 Query: 183 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 242 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278 Query: 243 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 291 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 424 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 483 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141841 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| || |||||||| || || ||| |||| || || |||||||| Sbjct: 101536 ccccagggtggatccgtcacccccaccgacatcgacgagctgctggacgccgtcgaatcc 101595 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||| Sbjct: 101596 ttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggtc 101655 Query: 691 gaacag 696 |||||| Sbjct: 101656 gaacag 101661 Score = 97.6 bits (49), Expect = 5e-17 Identities = 130/157 (82%) Strand = Plus / Plus Query: 132 tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 191 ||||||||||||| || ||||| |||||||||||||| | | | ||||||||| | Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143 Query: 192 cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 251 |||||| ||||| ||| | |||||||| | |||||||||||| ||| || ||||||||| Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203 Query: 252 gcacaaacatgatgatatccaaggtgaatgcatcccg 288 | ||||||||||| ||||||| |||||||| |||||| Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124959 Score = 91.7 bits (46), Expect = 3e-15 Identities = 151/186 (81%) Strand = Plus / Plus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 |||||| ||||||||||||||||||||||| | || ||||| ||| |||||||||| Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498 Query: 571 ccctagggtggagccggtgccaccaccgacgtccacaagccgctgcacaccatcgaatcc 630 ||| |||||||| ||| ||| |||||| | || || |||||||| | |||||||| || Sbjct: 91499 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctggatgccatcgaaacc 91558 Query: 631 cttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtc 690 | |||||| |||||||||||| | || ||||| | |||||||| |||||||| | ||| Sbjct: 91559 ttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggtc 91618 Query: 691 gaacag 696 |||||| Sbjct: 91619 gaacag 91624 Score = 65.9 bits (33), Expect = 2e-07 Identities = 135/169 (79%) Strand = Plus / Plus Query: 123 gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 182 ||||||| |||||||||| ||||| ||||| |||||||||||||| | || | || Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243 Query: 183 cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 242 ||||||| |||| | ||||| ||| | |||||||| | ||| ||||| ||||| || Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303 Query: 243 ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 291 |||||||||| ||||||| ||| ||||||| |||||||| |||| |||| Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352 Score = 56.0 bits (28), Expect = 2e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 424 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 483 |||||| |||| ||||||||| |||| | ||||||||||||||||||||| | |||||| Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1065 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 512 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 571 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618 Query: 572 cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 630 | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| || Sbjct: 617 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 559 Query: 631 cttgaagcgctcgagcatcttg 652 || ||| |||||||||| |||| Sbjct: 558 ctggaatcgctcgagcagcttg 537
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15, complete sequence Length = 144778 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 512 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 571 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547 Query: 572 cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 630 | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| || Sbjct: 103546 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 103488 Query: 631 cttgaagcgctcgagcatcttg 652 || ||| |||||||||| |||| Sbjct: 103487 ctggaatcgctcgagcagcttg 103466
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 75.8 bits (38), Expect = 2e-10 Identities = 118/142 (83%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 512 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 571 ||||||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727 Query: 572 cctagggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatcc 630 | ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| || Sbjct: 307726 tccagggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaaccc 307668 Query: 631 cttgaagcgctcgagcatcttg 652 || ||| |||||||||| |||| Sbjct: 307667 ctggaatcgctcgagcagcttg 307646 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525 Query: 571 ccctagggtggagccggtgccaccaccgacgtc 603 | | ||||||| ||||||||| || |||||||| Sbjct: 5127524 ctccagggtggcgccggtgcccccgccgacgtc 5127492
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full insert sequence Length = 1233 Score = 69.9 bits (35), Expect = 1e-08 Identities = 115/139 (82%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 515 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 574 |||||||||||||| |||| | |||||| |||| ||||||| | || ||||||||| | Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625 Query: 575 agggtggagccggtgccaccaccgacgtccacaagc-cgctgcacaccatcgaatccctt 633 ||||||| ||||||||| || |||||||| || ||| ||||| || || ||||| |||| Sbjct: 624 agggtggcgccggtgcccccgccgacgtcgacgagcacgctg-acgccgtcgaacccctg 566 Query: 634 gaagcgctcgagcatcttg 652 ||| |||||||||| |||| Sbjct: 565 gaatcgctcgagcagcttg 547
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688 Query: 571 ccctagggtggagccggtgccaccaccgacgtc 603 | | ||||||| ||||||||| || |||||||| Sbjct: 687 ctccagggtggcgccggtgcccccgccgacgtc 655
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798 Query: 571 ccctagggtggagccggtgccaccaccgacgtc 603 | | ||||||| ||||||||| || |||||||| Sbjct: 103797 ctccagggtggcgccggtgcccccgccgacgtc 103765
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full insert sequence Length = 1308 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714 Query: 571 ccctagggtggagccggtgccaccaccgacgtc 603 | | ||||||| ||||||||| || |||||||| Sbjct: 713 ctccagggtggcgccggtgcccccgccgacgtc 681
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 511 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 570 ||||||||| || ||||| |||| | |||||| || ||||||||| ||||||||||| Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701 Query: 571 ccctagggtggagccggtgccaccaccgacgtc 603 | | ||||||| ||||||||| || |||||||| Sbjct: 700 ctccagggtggcgccggtgcccccgccgacgtc 668
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene, complete cds Length = 3929 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 512 atgacatgaggcaggtcatagttgatgcc 540 ||||||||||||| ||||||||||||||| Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA, complete cds Length = 1494 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 512 atgacatgaggcaggtcatagttgatgcc 540 ||||||||||||| ||||||||||||||| Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase mRNA, partial cds Length = 1205 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 510 cgatgacatgaggcaggtcatagttgatgcc 540 |||||||||||||||| ||| |||||||||| Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 600 cgtccacaagccgctgcacacc 621 |||||||||||||||||||||| Sbjct: 1987800 cgtccacaagccgctgcacacc 1987779
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence Length = 238262 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 tcatacatatctccagccacatgtt 482 |||||||||| |||||||||||||| Sbjct: 237760 tcatacatatatccagccacatgtt 237784
>gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gagccggtgccaccaccgacg 601 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, partial cds Length = 1095 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gagccggtgccaccaccgacg 601 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, partial cds Length = 1094 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gagccggtgccaccaccgacg 601 ||||||||||||||||||||| Sbjct: 326 gagccggtgccaccaccgacg 306
>gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, partial cds Length = 1082 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 581 gagccggtgccaccaccgacg 601 ||||||||||||||||||||| Sbjct: 313 gagccggtgccaccaccgacg 293
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430501C11 product:unclassifiable, full insert sequence Length = 1789 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 tcatacatatctccagccacatgtt 482 |||||||||| |||||||||||||| Sbjct: 1024 tcatacatatatccagccacatgtt 1048
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 589 gccaccaccgacgtccacaag 609 ||||||||||||||||||||| Sbjct: 4165857 gccaccaccgacgtccacaag 4165837
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence Length = 150872 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 458 tcatacatatctccagccacatgtt 482 |||||||||| |||||||||||||| Sbjct: 45951 tcatacatatatccagccacatgtt 45975
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 agttgaagaatatgtaggttttctt 174 |||||||||| |||||||||||||| Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cccttgaagcgctcgagcat 648 |||||||||||||||||||| Sbjct: 406715 cccttgaagcgctcgagcat 406734
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence Length = 195926 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 ggagccggtgccaccaccga 599 |||||||||||||||||||| Sbjct: 156214 ggagccggtgccaccaccga 156233
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ctggaagagggaggccttgg 508 |||||||||||||||||||| Sbjct: 111 ctggaagagggaggccttgg 92
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 gagggaggccttgggcgatg 514 |||||||||||||||||||| Sbjct: 265 gagggaggccttgggcgatg 246
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial mRNA Length = 3549 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 ctggaagagggaggccttgg 508 |||||||||||||||||||| Sbjct: 111 ctggaagagggaggccttgg 92
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial mRNA Length = 843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 gagggaggccttgggcgatg 514 |||||||||||||||||||| Sbjct: 265 gagggaggccttgggcgatg 246
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cccttgaagcgctcgagcat 648 |||||||||||||||||||| Sbjct: 3254199 cccttgaagcgctcgagcat 3254218
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 agaaataataaaatgaaaat 26 |||||||||||||||||||| Sbjct: 130171 agaaataataaaatgaaaat 130152
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence Length = 225321 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttgaagagcacaaacatgat 264 |||||||||||||||||||| Sbjct: 180691 ttgaagagcacaaacatgat 180672
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tagaaataataaaatgaaaa 25 |||||||||||||||||||| Sbjct: 54063 tagaaataataaaatgaaaa 54044
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence Length = 25359 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 gaactcgtcgtcgttaagca 410 |||||||||||||||||||| Sbjct: 23437 gaactcgtcgtcgttaagca 23418
>emb|BX927322.12| Zebrafish DNA sequence from clone CH211-101J8 in linkage group 21, complete sequence Length = 110730 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 atagaaataataaaatgaaa 24 |||||||||||||||||||| Sbjct: 6531 atagaaataataaaatgaaa 6550
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 tggcaaactccttctccgtc 229 |||||||||||||||||||| Sbjct: 340353 tggcaaactccttctccgtc 340372
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 629 cccttgaagcgctcgagcat 648 |||||||||||||||||||| Sbjct: 2984071 cccttgaagcgctcgagcat 2984090
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence Length = 226483 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tagaaataataaaatgaaaa 25 |||||||||||||||||||| Sbjct: 23725 tagaaataataaaatgaaaa 23706
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125400 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 aaacatgatgatatccaagg 275 |||||||||||||||||||| Sbjct: 120643 aaacatgatgatatccaagg 120624
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence Length = 129658 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 acaaacatgatgatatccaa 273 |||||||||||||||||||| Sbjct: 111959 acaaacatgatgatatccaa 111978
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK101 Length = 734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ttttgggagagcgttgtggc 371 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK89 Length = 734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ttttgggagagcgttgtggc 371 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK41 Length = 728 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ttttgggagagcgttgtggc 371 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein CagA, partial cds, 3' region, strain:JapanK35 Length = 734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 ttttgggagagcgttgtggc 371 |||||||||||||||||||| Sbjct: 137 ttttgggagagcgttgtggc 118
>gb|AC104246.3| Homo sapiens chromosome 8, clone RP11-1073L1, complete sequence Length = 170284 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gatagaaataataaaatgaa 23 |||||||||||||||||||| Sbjct: 152801 gatagaaataataaaatgaa 152820
>gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, complete sequence Length = 146286 Score = 40.1 bits (20), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 10 aataataaaatgaaaatntaaat 32 ||||||||||||||||| ||||| Sbjct: 16579 aataataaaatgaaaatttaaat 16601
>gb|AC090365.7| Homo sapiens chromosome 18, clone RP11-885L22, complete sequence Length = 125792 Score = 40.1 bits (20), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 10 aataataaaatgaaaatntaaat 32 ||||||||||||||||| ||||| Sbjct: 35428 aataataaaatgaaaatttaaat 35406
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic sequence Length = 3734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 aaaagttgaagaatatgtag 166 |||||||||||||||||||| Sbjct: 177 aaaagttgaagaatatgtag 158
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic sequence Length = 3383 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 aaaagttgaagaatatgtag 166 |||||||||||||||||||| Sbjct: 2238 aaaagttgaagaatatgtag 2257
>gb|AC046174.6| Homo sapiens chromosome 8, clone RP11-621B3, complete sequence Length = 161619 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gatagaaataataaaatgaa 23 |||||||||||||||||||| Sbjct: 41177 gatagaaataataaaatgaa 41196
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence Length = 204567 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 agaaataataaaatgaaaat 26 |||||||||||||||||||| Sbjct: 124180 agaaataataaaatgaaaat 124199
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 621 catcgaatcccttgaagcgc 640 |||||||||||||||||||| Sbjct: 833397 catcgaatcccttgaagcgc 833378
>gb|AC012307.8| Homo sapiens BAC clone RP11-574O17 from 2, complete sequence Length = 145918 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 agaaataataaaatgaaaat 26 |||||||||||||||||||| Sbjct: 79570 agaaataataaaatgaaaat 79589
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226538 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 agaaataataaaatgaaaat 26 |||||||||||||||||||| Sbjct: 208362 agaaataataaaatgaaaat 208381
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase, complete cds Length = 1303 Score = 40.1 bits (20), Expect = 9.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 437 gcatctccagtgggtatactctcatacatatctcca 472 ||||||||| |||| | ||||||| ||||||||||| Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
>gb|AC078842.2|AC078842 Homo sapiens chromosome 7 clone RP11-102G17, complete sequence Length = 173844 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 tgatagaaataataaaatgaaaat 26 ||||| |||||||||||||||||| Sbjct: 3084 tgataaaaataataaaatgaaaat 3061
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic sequence Length = 2995 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 aaaagttgaagaatatgtag 166 |||||||||||||||||||| Sbjct: 1549 aaaagttgaagaatatgtag 1530
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence Length = 42412 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gagggaggccttgggcgatg 514 |||||||||||||||||||| Sbjct: 5744 gagggaggccttgggcgatg 5763
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11 Length = 46353 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 gagggaggccttgggcgatg 514 |||||||||||||||||||| Sbjct: 39948 gagggaggccttgggcgatg 39967
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome Length = 2616530 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 aaaagttgaagaatatgtag 166 |||||||||||||||||||| Sbjct: 226670 aaaagttgaagaatatgtag 226689
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18, complete sequence Length = 248419 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggtaaatccagcttgtttg 202 |||||||||||||||||||| Sbjct: 147510 cggtaaatccagcttgtttg 147491
>emb|AL096821.3|CNS00YVG Human chromosome 14 DNA sequence BAC R-677J5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 209111 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tagaaataataaaatgaaaa 25 |||||||||||||||||||| Sbjct: 1709 tagaaataataaaatgaaaa 1728
>emb|AL132719.4|CNS01DTH Human chromosome 14 DNA sequence BAC R-1082A3 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171505 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 tagaaataataaaatgaaaa 25 |||||||||||||||||||| Sbjct: 153269 tagaaataataaaatgaaaa 153288
>gb|AE015927.1| Clostridium tetani E88, complete genome Length = 2799251 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 atgatagaaataataaaatg 21 |||||||||||||||||||| Sbjct: 940104 atgatagaaataataaaatg 940123
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 629 cccttgaagcgctcgagcat 648 |||||||||||||||||||| Sbjct: 1888851 cccttgaagcgctcgagcat 1888832
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence Length = 162405 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 ggctagcctggcaaactcct 221 |||||||||||||||||||| Sbjct: 87830 ggctagcctggcaaactcct 87811
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome Length = 2499279 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 aaaagttgaagaatatgtag 166 |||||||||||||||||||| Sbjct: 342005 aaaagttgaagaatatgtag 342024
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete sequence Length = 86000 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tcccttgaagagcacaaaca 260 |||||||||||||||||||| Sbjct: 62557 tcccttgaagagcacaaaca 62538
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence Length = 197346 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 245 ttgaagagcacaaacatgat 264 |||||||||||||||||||| Sbjct: 79901 ttgaagagcacaaacatgat 79882
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18, complete sequence Length = 193827 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cggtaaatccagcttgtttg 202 |||||||||||||||||||| Sbjct: 173244 cggtaaatccagcttgtttg 173225
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 tagaaataataaaatgaaaa 25 |||||||||||||||||||| Sbjct: 143301 tagaaataataaaatgaaaa 143282
>emb|AL805968.6| Mouse DNA sequence from clone RP23-424G19 on chromosome 4, complete sequence Length = 171320 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 atagaaataataaaatgaaa 24 |||||||||||||||||||| Sbjct: 159096 atagaaataataaaatgaaa 159077 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,394,789 Number of Sequences: 3902068 Number of extensions: 5394789 Number of successful extensions: 112771 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112274 Number of HSP's gapped (non-prelim): 493 length of query: 708 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 685 effective length of database: 17,143,297,704 effective search space: 11743158927240 effective search space used: 11743158927240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)