>SECE_BUCAI (P57152) Preprotein translocase secE subunit|
          Length = 127

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 86  YHYRQNKQKVP*SPSWLSFSITPFFLIGDYL 178
           +HY +NK K+P    W+S SI  FF++  ++
Sbjct: 4   HHYNRNKHKIPEKVKWISISI--FFILSFFI 32

>GLGA2_ANASP (Q8Z0Q9) Probable glycogen synthase 2 (EC 2.4.1.21) (Starch|
           [bacterial glycogen] synthase 2)
          Length = 492

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 175 SCSKPVAAWIGKTDNEK-IAVLHNCFELLLRRGSKLCGVDTTTKGG 309
           +  KP+ A+IG+ DN+K + ++H+     L +G++   + + T+ G
Sbjct: 296 AADKPIIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAG 341

>GLGA1_ANAVT (Q3M9U1) Glycogen synthase 1 (EC 2.4.1.21) (Starch [bacterial|
           glycogen] synthase 1)
          Length = 492

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +1

Query: 175 SCSKPVAAWIGKTDNEK-IAVLHNCFELLLRRGSKLCGVDTTTKGG 309
           +  KP+ A+IG+ DN+K + ++H+     L +G++   + + T+ G
Sbjct: 296 AADKPIIAYIGRLDNQKGVHLVHHAIYHSLNKGAQFVLLGSATEAG 341

>YKY4_CAEEL (Q17963) Hypothetical WD-repeat protein C14B1.4|
          Length = 376

 Score = 29.6 bits (65), Expect = 9.7
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 12/85 (14%)
 Frame = -2

Query: 595 HLNHSITERAVT-----VSSGHVSIDGETVLHQANGKVVKVLDHLDANAYYT-----EFA 446
           +++H I ER +T     V+    S D   V+  ++ K +K+ + + +    T      + 
Sbjct: 115 NMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYV 174

Query: 445 KLLNTKKQSAVV--GSFDEQKRMWN 377
              N   QS++V  GSFDE  R+W+
Sbjct: 175 FCCNFNPQSSLVVSGSFDESVRIWD 199


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,926,927
Number of Sequences: 219361
Number of extensions: 2160314
Number of successful extensions: 5461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5460
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7366267610
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)