ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19a16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ175839.1| Hordeum vulgare clone DsB44 Ds insertion site fla... 52 0.003
2gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4... 42 2.5
3gb|U97011.3| Caenorhabditis elegans cosmid F31F7, complete sequence 42 2.5
4gb|U97001.2| Caenorhabditis elegans cosmid K08B12, complete sequ... 42 2.5
5gb|AY878348.1| Listeria seeligeri strain ATCC 35967 prfA virulen... 42 2.5
6gb|AC097745.8| Rattus norvegicus 3 BAC CH230-11N5 (Children's Ho... 42 2.5
7emb|X97014.1|LSPLCPRF L.seeligeri DNA for plcA/prfA operon 42 2.5
8gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete se... 42 2.5
9gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Canc... 42 2.5
10gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P... 42 2.5
11gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putat... 42 2.5
12gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, comple... 42 2.5
13gb|AF193439.1|AF193439 Lycopersicon esculentum glutathione S-tra... 42 2.5
14dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10,... 42 2.5
15dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.5
16emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 ... 42 2.5
17emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 42 2.5
18gb|AC144802.3| Mus musculus BAC clone RP24-222O23 from 10, compl... 42 2.5
19gb|AF399499.1| Homo sapiens clone OR2B7P olfactory receptor pseu... 40 9.8
20gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosom... 40 9.8
21gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, comp... 40 9.8
22gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, co... 40 9.8
23emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, compl... 40 9.8
24emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 ... 40 9.8
25gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome... 40 9.8
26gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome ... 40 9.8
27gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome... 40 9.8
28emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in... 40 9.8
29gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, compl... 40 9.8
30emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in... 40 9.8
31gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, comple... 40 9.8
32emb|CR711771.2|CNS0GC5J Tetraodon nigroviridis full-length cDNA 40 9.8
33gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, comp... 40 9.8
34emb|CR712634.2|CNS0GCTI Tetraodon nigroviridis full-length cDNA 40 9.8
35emb|CR705792.2|CNS0G7JG Tetraodon nigroviridis full-length cDNA 40 9.8
36gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, co... 40 9.8
37gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, co... 40 9.8
38emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on... 40 9.8
39emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chr... 40 9.8
40emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on ch... 40 9.8
41gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, com... 40 9.8
42emb|AL157783.15| Human DNA sequence from clone RP11-134A8 on chr... 40 9.8
43emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chrom... 40 9.8
44gb|AC157917.4| Mus musculus chromosome 3, clone RP23-120L6, comp... 40 9.8
45emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in ... 40 9.8
46emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 ... 40 9.8
47dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 9.8
48gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, com... 40 9.8
49gb|AC161601.4| Mus musculus BAC clone RP23-333L19 from chromosom... 40 9.8
50gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, comp... 40 9.8
51gb|AC008880.6| Homo sapiens chromosome 5 clone CTD-2210P10, comp... 40 9.8
52gb|AC016613.7| Homo sapiens chromosome 5 clone CTD-2207L2, compl... 40 9.8
53gb|AF274567.1|AF274567 Paramecium primaurelia G surface antigen ... 40 9.8
54ref|NG_004280.1| Homo sapiens olfactory receptor, family 2, subf... 40 9.8
55tpg|BK004559.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR... 40 9.8
56tpg|BK004742.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR... 40 9.8
57tpg|BK004613.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR... 40 9.8
58gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, r... 40 9.8
59gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosom... 40 9.8
60gb|AC078875.37| Homo sapiens 12 BAC RP11-614L17 (Roswell Park Ca... 40 9.8
61gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, comple... 40 9.8
62gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Can... 40 9.8
63dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu... 40 9.8
64gb|AF130816.1|AF130816 Buchnera aphidicola natural-host Diuraphi... 40 9.8
65gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 40 9.8
66gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64... 40 9.8
67emb|AL121944.14|HSDJ313I6 Human DNA sequence from clone RP1-313I... 40 9.8
68gb|AC123816.4| Mus musculus BAC clone RP24-254P6 from 8, complet... 40 9.8
69gb|BC067641.1| Danio rerio signal recognition particle 72, mRNA ... 40 9.8
70dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome 40 9.8
71emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chr... 40 9.8
72emb|X03882.1|PPSGP Paramecium primaurelia gene for G surface pro... 40 9.8
73emb|X52133.1|PP168G Paramecium 168G gene for 168G surface protein 40 9.8
74dbj|AB065469.1| Homo sapiens gene for seven transmembrane helix ... 40 9.8
75emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on ch... 40 9.8 
>gb|DQ175839.1| Hordeum vulgare clone DsB44 Ds insertion site flanking region
           genomic sequence
          Length = 628

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 515 gtgcaggacagtttcaccatctatgctcacatga 548
           |||||||| |||||||||||||| ||||||||||
Sbjct: 595 gtgcaggaaagtttcaccatctaagctcacatga 628
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>gb|AC160095.1| Lycopersicon esculentum chromosome 0 clone BB-BA4 map MAP_LOC, complete
             sequence
          Length = 121127

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 673   tttgcaatttctgcattgaca 693
             |||||||||||||||||||||
Sbjct: 88039 tttgcaatttctgcattgaca 88059
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>gb|U97011.3| Caenorhabditis elegans cosmid F31F7, complete sequence
          Length = 18210

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 321  aataatattttcctttccatg 341
            |||||||||||||||||||||
Sbjct: 5845 aataatattttcctttccatg 5865
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>gb|U97001.2| Caenorhabditis elegans cosmid K08B12, complete sequence
          Length = 37679

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 321   aataatattttcctttccatg 341
             |||||||||||||||||||||
Sbjct: 36123 aataatattttcctttccatg 36143
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>gb|AY878348.1| Listeria seeligeri strain ATCC 35967 prfA virulence gene cluster,
            partial sequence
          Length = 22122

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 589  tcagatgtgattgctgaacca 609
            |||||||||||||||||||||
Sbjct: 3291 tcagatgtgattgctgaacca 3271
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>gb|AC097745.8| Rattus norvegicus 3 BAC CH230-11N5 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 611   gaaaacagcaccaagaagctc 631
             |||||||||||||||||||||
Sbjct: 79986 gaaaacagcaccaagaagctc 79966
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>emb|X97014.1|LSPLCPRF L.seeligeri DNA for plcA/prfA operon
          Length = 8154

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 589  tcagatgtgattgctgaacca 609
            |||||||||||||||||||||
Sbjct: 2660 tcagatgtgattgctgaacca 2640
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>gb|AC157733.2| Xenopus tropicalis clone ISB1-355J23, complete sequence
          Length = 82312

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   atcttggttatccttctccat 147
             |||||||||||||||||||||
Sbjct: 35053 atcttggttatccttctccat 35073
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>gb|AC158800.6| Mus musculus 10 BAC RP23-435N6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190805

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 533    atctatgctcacatgaccaga 553
              |||||||||||||||||||||
Sbjct: 172642 atctatgctcacatgaccaga 172622
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>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete
             sequence
          Length = 144474

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   aagagagaataatattttcct 334
             |||||||||||||||||||||
Sbjct: 75014 aagagagaataatattttcct 75034
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>gb|AY796114.1| Lycopersicon esculentum clone Le_HBa 153G23 putative transposase,
             putative BAH domain-containing protein, putative permease
             I, putative pollen specific LIM domain-containing protein,
             putative betaine aldehyde dehyrogenase, EDS1, and putative
             ribosomal-protein S6 kinase-like protein genes, complete
             cds
          Length = 121127

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 673   tttgcaatttctgcattgaca 693
             |||||||||||||||||||||
Sbjct: 88039 tttgcaatttctgcattgaca 88059
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>gb|AC018686.7| Homo sapiens BAC clone RP11-458M16 from 2, complete sequence
          Length = 223367

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 556   taacagtgacagccctttctg 576
             |||||||||||||||||||||
Sbjct: 96119 taacagtgacagccctttctg 96099
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>gb|AF193439.1|AF193439 Lycopersicon esculentum glutathione S-transferase/peroxidase
           (BI-GST/GPX) mRNA, complete cds
          Length = 739

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 295 acaacaaagggaggagggcaagaga 319
           |||||||||||||||| ||||||||
Sbjct: 351 acaacaaagggaggagagcaagaga 375
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>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete
              sequences
          Length = 196989

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    aagagagaataatattttcct 334
              |||||||||||||||||||||
Sbjct: 174604 aagagagaataatattttcct 174624
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>dbj|AP001301.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F8N14
          Length = 68639

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 119   tgatcaccatcttggttatcc 139
             |||||||||||||||||||||
Sbjct: 44340 tgatcaccatcttggttatcc 44360
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>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22,
              segment 2/3
          Length = 348050

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 314    aagagagaataatattttcct 334
              |||||||||||||||||||||
Sbjct: 155568 aagagagaataatattttcct 155548
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>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 314   aagagagaataatattttcct 334
             |||||||||||||||||||||
Sbjct: 43509 aagagagaataatattttcct 43529
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>gb|AC144802.3| Mus musculus BAC clone RP24-222O23 from 10, complete sequence
          Length = 154807

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 533   atctatgctcacatgaccaga 553
             |||||||||||||||||||||
Sbjct: 48448 atctatgctcacatgaccaga 48428
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>gb|AF399499.1| Homo sapiens clone OR2B7P olfactory receptor pseudogene, partial
           sequence
          Length = 651

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 372 ttggtgcaggacagtttcagcatc 349
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>gb|AC147983.3| Mus musculus BAC clone RP24-401J11 from chromosome 17, complete sequence
          Length = 157958

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    agggaggagggcaagagaga 321
              ||||||||||||||||||||
Sbjct: 129845 agggaggagggcaagagaga 129864
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>gb|AC145970.2| Pan troglodytes BAC clone RP43-17L12 from 7, complete sequence
          Length = 182677

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     cagaaaaaacacagaaccaa 83
              ||||||||||||||||||||
Sbjct: 112505 cagaaaaaacacagaaccaa 112524
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>gb|AC107837.11| Mus musculus chromosome 1, clone RP23-272H13, complete sequence
          Length = 189415

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 305    gaggagggcaagagagaataatat 328
              |||||||||||||||| |||||||
Sbjct: 161107 gaggagggcaagagaggataatat 161130
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>emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, complete sequence
          Length = 148950

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gcagtcttgcacaactgctttgaa 252
             |||||||||||||| |||||||||
Sbjct: 11943 gcagtcttgcacaagtgctttgaa 11966
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>emb|BX936415.10| Zebrafish DNA sequence from clone CH211-242N18 in linkage group 6,
             complete sequence
          Length = 176089

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 578   gattgagtgattcagatgtgattg 601
             |||||||| |||||||||||||||
Sbjct: 43778 gattgagtaattcagatgtgattg 43755
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>gb|AC139296.4| Mus musculus BAC clone RP24-131C5 from chromosome 18, complete sequence
          Length = 165703

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ttgagcagctttgcaaattc 454
             ||||||||||||||||||||
Sbjct: 74862 ttgagcagctttgcaaattc 74843
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>gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome 7, complete sequence
          Length = 150343

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  ttgagtgattcagatgtgat 599
            ||||||||||||||||||||
Sbjct: 9545 ttgagtgattcagatgtgat 9564
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>gb|AC121822.3| Mus musculus BAC clone RP23-465H5 from chromosome 17, complete sequence
          Length = 197213

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 302    agggaggagggcaagagaga 321
              ||||||||||||||||||||
Sbjct: 175966 agggaggagggcaagagaga 175947
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>emb|CR786570.9| Zebrafish DNA sequence from clone CH211-280H4 in linkage group 1,
             complete sequence
          Length = 74239

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 672   ttttgcaatttctgcattga 691
             ||||||||||||||||||||
Sbjct: 22574 ttttgcaatttctgcattga 22555
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>gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, complete sequence
          Length = 191988

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     taaacagaaaaaacacagaa 79
              ||||||||||||||||||||
Sbjct: 148060 taaacagaaaaaacacagaa 148079
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>emb|BX571713.11| Zebrafish DNA sequence from clone DKEY-19H21 in linkage group 9,
             complete sequence
          Length = 103882

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    acaggcaaaacaaacagaaa 112
             ||||||||||||||||||||
Sbjct: 88235 acaggcaaaacaaacagaaa 88254
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>gb|AC111007.4| Mus musculus BAC clone RP23-226I10 from 3, complete sequence
          Length = 176259

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 663    tggttattcttttgcaattt 682
              ||||||||||||||||||||
Sbjct: 116635 tggttattcttttgcaattt 116654
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>emb|CR711771.2|CNS0GC5J Tetraodon nigroviridis full-length cDNA
          Length = 482

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 622 caagaagctccccaaggaacatgt 645
           |||||||||||||||| |||||||
Sbjct: 341 caagaagctccccaagtaacatgt 364
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>gb|AC138642.10| Mus musculus chromosome 3, clone RP23-21O7, complete sequence
          Length = 252108

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    atttgttccacattcttttc 392
              ||||||||||||||||||||
Sbjct: 183661 atttgttccacattcttttc 183642
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>emb|CR712634.2|CNS0GCTI Tetraodon nigroviridis full-length cDNA
          Length = 482

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 622 caagaagctccccaaggaacatgt 645
           |||||||||||||||| |||||||
Sbjct: 341 caagaagctccccaagtaacatgt 364
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>emb|CR705792.2|CNS0G7JG Tetraodon nigroviridis full-length cDNA
          Length = 565

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 622 caagaagctccccaaggaacatgt 645
           |||||||||||||||| |||||||
Sbjct: 341 caagaagctccccaagtaacatgt 364
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>gb|AC113019.13| Mus musculus chromosome 7, clone RP23-185A21, complete sequence
          Length = 215975

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 580  ttgagtgattcagatgtgat 599
            ||||||||||||||||||||
Sbjct: 4700 ttgagtgattcagatgtgat 4681
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>gb|AC124108.15| Mus musculus chromosome 1, clone RP24-340N18, complete sequence
          Length = 178775

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 305    gaggagggcaagagagaataatat 328
              |||||||||||||||| |||||||
Sbjct: 157678 gaggagggcaagagaggataatat 157655
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>emb|Z97630.11|HS466N1 Human DNA sequence from clone RP3-466N1 on chromosome 22q12-13,
             complete sequence
          Length = 79528

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    aaacagaaaaaacacagaaccaaa 84
             ||||||||||||||||||| ||||
Sbjct: 62337 aaacagaaaaaacacagaaacaaa 62314
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>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the
             5' end of the CDKN2B gene for cyclin-dependent kinase
             inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52
             residue ribosomal protein fusion product 1 (UBA52) (RPL40)
             pseudogene, the 3' end of a variant of the MTAP gene for
             methylthioadenosine phosphorylase (MSAP), a novel gene and
             a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 229   gcagtcttgcacaactgctttgaa 252
             |||||||||||||| |||||||||
Sbjct: 29581 gcagtcttgcacaagtgctttgaa 29604
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>emb|AL354889.14| Human DNA sequence from clone RP11-290F20 on chromosome 20 Contains
             three novel genes, complete sequence
          Length = 160311

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   aagagagaataatattttcc 333
             ||||||||||||||||||||
Sbjct: 87217 aagagagaataatattttcc 87198
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>gb|AC116320.5| Mus musculus chromosome 18 clone RP23-269B16, complete sequence
          Length = 195630

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   ttgagcagctttgcaaattc 454
             ||||||||||||||||||||
Sbjct: 28806 ttgagcagctttgcaaattc 28787
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>emb|AL157783.15| Human DNA sequence from clone RP11-134A8 on chromosome 10 Contains the
             5'end of the CREM gene for cAMP responsive element
             modulator, a novel gene, a vacuolar ATPase subunit
             (ATP6V1G2) pseudogene and a CpG island, complete sequence
          Length = 97643

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 374   tttgttccacattcttttct 393
             ||||||||||||||||||||
Sbjct: 21844 tttgttccacattcttttct 21863
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>emb|AL136324.6| Human DNA sequence from clone RP5-944H6 on chromosome 1p22.3-31.2
             Contains the 3' end of the PTGFR gene for prostaglandin,
             complete sequence
          Length = 135758

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   gataatgaaaaaattgcagt 233
             ||||||||||||||||||||
Sbjct: 94397 gataatgaaaaaattgcagt 94378
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>gb|AC157917.4| Mus musculus chromosome 3, clone RP23-120L6, complete sequence
          Length = 206959

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 663   tggttattcttttgcaattt 682
             ||||||||||||||||||||
Sbjct: 73222 tggttattcttttgcaattt 73241
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>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3,
             complete sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    actacaggcaaaacaaacagaaag 113
             ||||||||||||||||||| ||||
Sbjct: 37252 actacaggcaaaacaaacacaaag 37275
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>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3,
             complete sequence
          Length = 199512

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 90    actacaggcaaaacaaacagaaag 113
             ||||||||||||||||||| ||||
Sbjct: 34338 actacaggcaaaacaaacacaaag 34361
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 653    atgatatgcttggttattct 672
              ||||||||||||||||||||
Sbjct: 603109 atgatatgcttggttattct 603128
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>gb|AC093566.3| Homo sapiens chromosome 8, clone CTD-2017M22, complete sequence
          Length = 177522

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tccttctccataactccctt 156
              ||||||||||||||||||||
Sbjct: 107097 tccttctccataactccctt 107116
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>gb|AC161601.4| Mus musculus BAC clone RP23-333L19 from chromosome 3, complete sequence
          Length = 200393

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 663    tggttattcttttgcaattt 682
              ||||||||||||||||||||
Sbjct: 171164 tggttattcttttgcaattt 171145
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>gb|AC093289.2| Homo sapiens chromosome 5 clone RP11-473L15, complete sequence
          Length = 159956

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 202   attggaaagacagataatgaaaaa 225
             |||||||||||||||| |||||||
Sbjct: 36926 attggaaagacagatattgaaaaa 36949
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>gb|AC008880.6| Homo sapiens chromosome 5 clone CTD-2210P10, complete sequence
          Length = 105975

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 513   tggtgcaggacagtttcaccatct 536
             ||||||||||||||||| ||||||
Sbjct: 68571 tggtgcaggacagtttccccatct 68548
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>gb|AC016613.7| Homo sapiens chromosome 5 clone CTD-2207L2, complete sequence
          Length = 121131

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 513   tggtgcaggacagtttcaccatct 536
             ||||||||||||||||| ||||||
Sbjct: 87147 tggtgcaggacagtttccccatct 87170
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>gb|AF274567.1|AF274567 Paramecium primaurelia G surface antigen pseudogene, complete
            sequence
          Length = 7744

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  cttgcacaactgctttgaat 253
            ||||||||||||||||||||
Sbjct: 6165 cttgcacaactgctttgaat 6184
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>ref|NG_004280.1| Homo sapiens olfactory receptor, family 2, subfamily B, member 7
           pseudogene (OR2B7P) on chromosome 6
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 673 ttggtgcaggacagtttcagcatc 650
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>tpg|BK004559.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR6-9 pseudogene,
           complete sequence
          Length = 935

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 574 ttggtgcaggacagtttcagcatc 551
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>tpg|BK004742.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR6-8 pseudogene,
           complete sequence
          Length = 934

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 573 ttggtgcaggacagtttcagcatc 550
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>tpg|BK004613.1| TPA: TPA_exp: Homo sapiens olfactory receptor OR6-7 pseudogene,
           complete sequence
          Length = 935

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 573 ttggtgcaggacagtttcagcatc 550
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>gb|AC008192.8|AC008192 Drosophila melanogaster, chromosome 3R, region 92A-92A, BAC clone
              BACR12P10, complete sequence
          Length = 186686

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 202    attggaaagacagataatgaaaaa 225
              |||||||| |||||||||||||||
Sbjct: 170313 attggaaaaacagataatgaaaaa 170336
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>gb|AC154621.2| Mus musculus BAC clone RP23-323P15 from chromosome 14, complete sequence
          Length = 211243

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    aaacagaaagttccatgatc 123
              ||||||||||||||||||||
Sbjct: 113295 aaacagaaagttccatgatc 113314
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>gb|AC078875.37| Homo sapiens 12 BAC RP11-614L17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 60209

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   ataatattttcctttccatg 341
             ||||||||||||||||||||
Sbjct: 31041 ataatattttcctttccatg 31022
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>gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, complete sequence
          Length = 184406

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 610   agaaaacagcaccaagaagc 629
             ||||||||||||||||||||
Sbjct: 45978 agaaaacagcaccaagaagc 45997
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>gb|AC108670.10| Homo sapiens 3 BAC RP11-218A22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163157

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   tggaaagacagataatgaaa 223
             ||||||||||||||||||||
Sbjct: 97782 tggaaagacagataatgaaa 97763
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>dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisum) genomic DNA, complete
              sequence
          Length = 640681

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 668    attcttttgcaatttctgca 687
              ||||||||||||||||||||
Sbjct: 233422 attcttttgcaatttctgca 233441
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>gb|AF130816.1|AF130816 Buchnera aphidicola natural-host Diuraphis noxia cell septation
           protein (ftsZ) gene, partial cds
          Length = 1051

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 668 attcttttgcaatttctgca 687
           ||||||||||||||||||||
Sbjct: 299 attcttttgcaatttctgca 280
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>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
              BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 93     acaggcaaaacaaacagaaa 112
              ||||||||||||||||||||
Sbjct: 117834 acaggcaaaacaaacagaaa 117853
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>gb|AE003726.3| Drosophila melanogaster chromosome 3R, section 64 of 118 of the complete
              sequence
          Length = 247876

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 202    attggaaagacagataatgaaaaa 225
              |||||||| |||||||||||||||
Sbjct: 228472 attggaaaaacagataatgaaaaa 228495



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    acaggcaaaacaaacagaaa 112
             ||||||||||||||||||||
Sbjct: 13296 acaggcaaaacaaacagaaa 13315
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>emb|AL121944.14|HSDJ313I6 Human DNA sequence from clone RP1-313I6 on chromosome 6 Contains a
             KIAA0036 pseudogene, olfactory receptor 2W2, 2B7, 2B8 and
             1F12 pseudogenes (OR2W2P, OR2B7P, OR2B8 and OR1F12), the
             ZNF165 gene for zinc finger protein 165, two zinc finger
             protein pseudogenes, ESTs, STSs, GSSs and two CpG islands,
             complete sequence
          Length = 130279

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 512   ttggtgcaggacagtttcaccatc 535
             ||||||||||||||||||| ||||
Sbjct: 65785 ttggtgcaggacagtttcagcatc 65762
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>gb|AC123816.4| Mus musculus BAC clone RP24-254P6 from 8, complete sequence
          Length = 197641

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   acattcttttctgctcatca 401
             ||||||||||||||||||||
Sbjct: 92364 acattcttttctgctcatca 92383
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>gb|BC067641.1| Danio rerio signal recognition particle 72, mRNA (cDNA clone
            IMAGE:6962108), partial cds
          Length = 2416

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 94   caggcaaaacaaacagaaag 113
            ||||||||||||||||||||
Sbjct: 2233 caggcaaaacaaacagaaag 2214
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>dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome
          Length = 4303871

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 154     cttttttctcataggtgact 173
               ||||||||||||||||||||
Sbjct: 1714382 cttttttctcataggtgact 1714363
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>emb|AL671893.7| Mouse DNA sequence from clone RP23-170G19 on chromosome X, complete
             sequence
          Length = 175057

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atcactacaggcaaaacaaa 106
             ||||||||||||||||||||
Sbjct: 73694 atcactacaggcaaaacaaa 73713
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>emb|X03882.1|PPSGP Paramecium primaurelia gene for G surface protein
          Length = 8548

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  cttgcacaactgctttgaat 253
            ||||||||||||||||||||
Sbjct: 6859 cttgcacaactgctttgaat 6878
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>emb|X52133.1|PP168G Paramecium 168G gene for 168G surface protein
          Length = 8511

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 234  cttgcacaactgctttgaat 253
            ||||||||||||||||||||
Sbjct: 6821 cttgcacaactgctttgaat 6840
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>dbj|AB065469.1| Homo sapiens gene for seven transmembrane helix receptor,
           isolate:CBRC7TM_32
          Length = 1382

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 512 ttggtgcaggacagtttcaccatc 535
           ||||||||||||||||||| ||||
Sbjct: 773 ttggtgcaggacagtttcagcatc 750
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>emb|AL611947.11| Mouse DNA sequence from clone RP23-319H15 on chromosome 4, complete
             sequence
          Length = 64760

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    acaggcaaaacaaacagaaa 112
             ||||||||||||||||||||
Sbjct: 40763 acaggcaaaacaaacagaaa 40782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,113,649
Number of Sequences: 3902068
Number of extensions: 8113649
Number of successful extensions: 171646
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171397
Number of HSP's gapped (non-prelim): 249
length of query: 719
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 696
effective length of database: 17,143,297,704
effective search space: 11931735201984
effective search space used: 11931735201984
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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