| Clone Name | rbags19a12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP006861.1| Chlamydophila felis Fe/C-56 DNA, complete genome Length = 1166239 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 404 tatttacagaaactttatggct 425 |||||||||||||||||||||| Sbjct: 907957 tatttacagaaactttatggct 907978
>gb|AC039056.7|AC039056 Homo sapiens chromosome 15 clone CTD-2382E5 map 15q14, complete sequence Length = 176708 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 tgcatgtatcttacaaatatcctctc 26 |||| ||||||||||||||||||||| Sbjct: 67943 tgcaggtatcttacaaatatcctctc 67968
>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence Length = 261450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 catgtatcttacaaatatcct 23 ||||||||||||||||||||| Sbjct: 4134 catgtatcttacaaatatcct 4154
>emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 in linkage group 1, complete sequence Length = 148678 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 395 tgtaatacatatttacagaaa 415 ||||||||||||||||||||| Sbjct: 102762 tgtaatacatatttacagaaa 102742
>emb|AL662874.9| Human DNA sequence from clone RP13-24G8 on chromosome X Contains a novel gene, a delta sleep inducing peptide, immunoreactor (DSIPI) pseudogene, the PABPC5 gene for poly(A) binding protein, cytoplasmic 5 and a CpG island, complete sequence Length = 160906 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 aaaagtttacaacacttgtca 127 ||||||||||||||||||||| Sbjct: 71442 aaaagtttacaacacttgtca 71462
>emb|AL356117.16| Human DNA sequence from clone RP11-258G21 on chromosome 6 Contains part of the BAI3 gene for brain-specific angiogenesis inhibitor 3, complete sequence Length = 127079 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 tcttacattcacataaaagtt 113 ||||||||||||||||||||| Sbjct: 10813 tcttacattcacataaaagtt 10793
>gb|AC140831.3| Homo sapiens chromosome 16 clone RP11-907K12, complete sequence Length = 96984 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 catgtatcttacaaatatcct 23 ||||||||||||||||||||| Sbjct: 92851 catgtatcttacaaatatcct 92831
>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced Length = 90756 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ttaaacatttgaggatattt 260 |||||||||||||||||||| Sbjct: 19179 ttaaacatttgaggatattt 19198
>gb|AY616680.1| Danio rerio elastase A gene, promoter region Length = 2875 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttacagaaactttatggctt 426 |||||||||||||||||||| Sbjct: 1615 ttacagaaactttatggctt 1596
>gb|AC146575.3| Medicago truncatula clone mth2-145m4, complete sequence Length = 117113 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aactttatggctttgattca 433 |||||||||||||||||||| Sbjct: 109575 aactttatggctttgattca 109556
>emb|BX255910.3| Mouse DNA sequence from clone RP23-398G11 on chromosome 11 Contains a novel gene and the 3' end of the gene for a novel protein (E030025D05Rik), complete sequence Length = 179386 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ttcacataaaagtttacaac 119 |||||||||||||||||||| Sbjct: 112556 ttcacataaaagtttacaac 112575
>emb|CR407555.9| Zebrafish DNA sequence from clone DKEY-260H8 in linkage group 5, complete sequence Length = 156095 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tacaatcttacattcacata 107 |||||||||||||||||||| Sbjct: 155196 tacaatcttacattcacata 155215
>emb|BX510923.8| Zebrafish DNA sequence from clone CH211-214J8 in linkage group 5, complete sequence Length = 165838 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 407 ttacagaaactttatggctt 426 |||||||||||||||||||| Sbjct: 144409 ttacagaaactttatggctt 144390
>dbj|AP007174.1| Aspergillus oryzae RIB40 genomic DNA, SC103 Length = 1282697 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tagaaatagtaagtaccctt 185 |||||||||||||||||||| Sbjct: 649174 tagaaatagtaagtaccctt 649193
>gb|AC092596.3| Homo sapiens BAC clone RP11-100J5 from 4, complete sequence Length = 175644 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 catatttacagaaactttat 421 |||||||||||||||||||| Sbjct: 100391 catatttacagaaactttat 100372
>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence Length = 163772 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttaaacatttgaggatattt 260 |||||||||||||||||||| Sbjct: 1542 ttaaacatttgaggatattt 1523
>gb|AC092461.6| Homo sapiens BAC clone RP11-232I22 from 2, complete sequence Length = 39674 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ttaaacatttgaggatattt 260 |||||||||||||||||||| Sbjct: 39216 ttaaacatttgaggatattt 39197
>gb|AE014133.1| Streptococcus mutans UA159, complete genome Length = 2030921 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 acagaaactttatggctttg 428 |||||||||||||||||||| Sbjct: 88666 acagaaactttatggctttg 88647
>emb|AL929202.6| Zebrafish DNA sequence from clone DKEY-147L19, complete sequence Length = 105855 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 tacaatcttacattcacata 107 |||||||||||||||||||| Sbjct: 1101 tacaatcttacattcacata 1120
>gb|AF027335.1|AF027335 Equus caballus prostaglandin G/H synthase-2 gene, promoter and complete cds Length = 8479 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 cattcaataaaacaactgaa 325 |||||||||||||||||||| Sbjct: 3019 cattcaataaaacaactgaa 3000
>emb|CT027663.2| Medicago truncatula chromosome 5 clone mth2-139g23, COMPLETE SEQUENCE Length = 133229 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aactttatggctttgattca 433 |||||||||||||||||||| Sbjct: 4706 aactttatggctttgattca 4687
>dbj|AP006709.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D19, TM0592, complete sequence Length = 96561 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aactttatggctttgattca 433 |||||||||||||||||||| Sbjct: 9195 aactttatggctttgattca 9214
>dbj|AP004528.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT03B03, TM0057b, complete sequence Length = 77452 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aactttatggctttgattca 433 |||||||||||||||||||| Sbjct: 29455 aactttatggctttgattca 29436 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,526,783 Number of Sequences: 3902068 Number of extensions: 4526783 Number of successful extensions: 80683 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80610 Number of HSP's gapped (non-prelim): 73 length of query: 483 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 461 effective length of database: 17,147,199,772 effective search space: 7904859094892 effective search space used: 7904859094892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)