>HHIP_HUMAN (Q96QV1) Hedgehog-interacting protein precursor (HHIP) (HIP)|
          Length = 700

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +3

Query: 324 MQPATT*GTVCPRISRNGFVSASG---CSIGSS*TIWFNTSACFPAC 455
           +QPA T  + C R+ RNG+ + +G   CS G     +  T+ C PAC
Sbjct: 598 VQPAQTLTSECSRLCRNGYCTPTGKCCCSPGWE-GDFCRTAKCEPAC 643

>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium channel|
            protein type V alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.5) (Sodium channel protein,
            cardiac muscle alpha-subunit) (HH1)
          Length = 2016

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 505  SVILACVVMHDAF---GVRLHAGKQAEVLNQIVYELPIEHPLAETKPLREILGHT 350
            +V+L C++    F   GV L AGK    +NQ   +LP+ + +   K   E L  T
Sbjct: 1336 NVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNNKSQCESLNLT 1390

>O10K2_HUMAN (Q6IF99) Olfactory receptor 10K2 (Olfactory receptor OR1-4)|
          Length = 312

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
 Frame = -2

Query: 439 AEVLNQIVYELP------IEHPLAETKPLREILGHT--VPQVVAGCILGILTAVIMLLVL 284
           A+++  +V+ LP      + H   +  P+ ++  H     Q+V   +  ++ A+ +LL+L
Sbjct: 156 AQIITSLVFHLPFYSSNQLHHFFCDIAPVLKLASHHNHFSQIVIFMLCTLVLAIPLLLIL 215

Query: 283 GSYI*ISAIFDHLISYRRSCKA 218
            SY+ I +      S    CKA
Sbjct: 216 VSYVHILSAILQFPSTLGRCKA 237

>LSPA_TREPA (O83943) Lipoprotein signal peptidase (EC 3.4.23.36)|
           (Prolipoprotein signal peptidase) (Signal peptidase II)
           (SPase II)
          Length = 197

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -2

Query: 361 LGHTVPQVVAGCILGILTAVIMLLVLGSY 275
           +GH + QV+   +LGI+  +IM L++ SY
Sbjct: 74  IGHQLNQVLRTLVLGIVPLIIMFLIVFSY 102

>RBGPR_RAT (Q5U1Z0) Rab3 GTPase-activating protein non-catalytic subunit (Rab3|
            GTPase-activating protein 150 kDa subunit) (Rab3-GAP
            p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150)
          Length = 1386

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +1

Query: 451  RATEHQKHRASPHMQVSLKLQMWH 522
            R+ EH +H  +PH+Q  + L MW+
Sbjct: 1034 RSIEHLRHILNPHVQNGISLMMWN 1057

>SCN5A_RAT (P15389) Sodium channel protein type 5 alpha subunit (Sodium channel|
            protein type V alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.5) (Sodium channel protein,
            cardiac muscle alpha-subunit)
          Length = 2019

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = -2

Query: 505  SVILACVVMHDAF---GVRLHAGKQAEVLNQIVYELPIEHPLAETK 377
            +V+L C++    F   GV L AGK    +NQ   +LP+ + +   K
Sbjct: 1338 NVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTIVNNK 1383

>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)|
          Length = 969

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/46 (28%), Positives = 26/46 (56%)
 Frame = +2

Query: 71  PTANISDLQHQLKLRPTILQRRSKSVKTL*QQHGQATFTHYIQDEL 208
           P   +++L H+ +     +QR++K  K L ++   A  TH ++DE+
Sbjct: 670 PEDEMANLMHRRRRAIAPIQRKAKERKELLEKERMAGLTHALEDEI 715

>LSHR_CHICK (Q90674) Lutropin-choriogonadotropic hormone receptor (LH/CG-R)|
           (LSH-R) (Luteinizing hormone receptor) (Fragment)
          Length = 366

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 361 LGHTVPQVVAGCILGILTAVIMLLVLGSYI*IS 263
           L H VP ++ G +  IL AV+ LL + SY+ +S
Sbjct: 143 LRHAVPIMLGGWVFSILIAVLPLLGVSSYMKVS 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,681,072
Number of Sequences: 219361
Number of extensions: 1508836
Number of successful extensions: 4122
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4121
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)