ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA 462 e-127
2ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA 129 7e-27
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 129 7e-27
4dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 129 7e-27
5emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent an... 129 7e-27
6dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 7e-27
7dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 7e-27
8dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 7e-27
9gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel ... 111 2e-21
10gb|AY104870.1| Zea mays PCO081914 mRNA sequence 111 2e-21
11gb|BT016491.1| Zea mays clone Contig324 mRNA sequence 103 4e-19
12ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
13gb|BT016888.1| Zea mays clone Contig721 mRNA sequence 96 1e-16
14gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 96 1e-16
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 1e-16
16emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent... 96 1e-16
17dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
18gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel ... 88 3e-14
19gb|AY104198.1| Zea mays PCO099812 mRNA sequence 88 3e-14
20gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel ... 80 6e-12
21ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predic... 44 0.34
22gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, c... 44 0.34
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
24dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
25emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent... 44 0.34
26emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent... 44 0.34
27dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
28dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
29dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
30dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.34
31dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone... 44 0.34
32gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Canc... 42 1.3
33gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence 42 1.3
34gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-depend... 42 1.3
35ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcopla... 40 5.3
36emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chr... 40 5.3
37emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 s... 40 5.3
38gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.3
39gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-depen... 40 5.3
40emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chr... 40 5.3 
>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA
          Length = 1159

 Score =  462 bits (233), Expect = e-127
 Identities = 357/394 (90%), Gaps = 8/394 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    cttgaattattactgcaangtgtggctcaacggacaggcactacaccgaccaaagtacaa 60
            |||||||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1093 cttgaattattactgcga-gtgtggctcaacggacaggcactacaccgagcaaag-acaa 1036

                                                                        
Query: 61   aattcctcaggattgaaacacggcagttcttcaaatctaacagactgcgacaacgcgccc 120
            |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 1035 aattcctcaggaatgaaacacggcagttcttcaaatctaacagactgcaacaacgggccc 976

                                                                        
Query: 121  aaggcgtgtgaagtatttgtcaaatcgccacgattccatccgaaaccgaggaacacccct 180
            ||||  ||||||||||| |||||  |||| ||||| ||||||||||||||||||||||||
Sbjct: 975  aagggctgtgaagtatt-gtcaacccgccccgatttcatccgaaaccgaggaacacccct 917

                                                                        
Query: 181  ga----gagttcagaaaagagagggcttgatttcgccatcaaggcttgagagcaatcgca 236
            ||    ||| | ||| ||| | |||||||||| ||| ||||||||||||||||||| |||
Sbjct: 916  gactgagagcttagagaaggg-gggcttgattccgcaatcaaggcttgagagcaatagca 858

                                                                        
Query: 237  atgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcag 296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 857  atgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcac 798

                                                                        
Query: 297  ancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatg 356
            | |||||| ||| |||||||| |||||||||||||||| ||||||||||| |||||||| 
Sbjct: 797  agcgactttggcatgaactcgtgctggatcagcgcgctggccttgccagagttgttgatc 738

                                              
Query: 357  cgagccttcacnagggtgagcgggtctagggtat 390
            || |||||||| |||||||||||||| |||||||
Sbjct: 737  cgggccttcacaagggtgagcgggtccagggtat 704
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>ref|XM_450604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 274 ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                            
Query: 334 ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
           | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 747
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                            
Query: 214      atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
                ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 11754957 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 11754898

                                                                            
Query: 274      ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
                | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 11754897 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 11754838

                                                                 
Query: 334      ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
                | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 11754837 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 11754789
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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                          
Query: 214    atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
              ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 189591 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 189532

                                                                          
Query: 274    ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
              | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 189531 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 189472

                                                               
Query: 334    ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
              | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 189471 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 189423
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>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel
          Length = 1093

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 852 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 793

                                                                       
Query: 274 ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 792 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 733

                                                            
Query: 334 ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
           | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 732 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 684
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>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full
            insert sequence
          Length = 3071

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                        
Query: 214  atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
            ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 2862 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 2803

                                                                        
Query: 274  ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
            | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 2802 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 2743

                                                             
Query: 334  ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
            | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 2742 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 2694
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>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full
           insert sequence
          Length = 1125

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 915 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 856

                                                                       
Query: 274 ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 855 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 796

                                                            
Query: 334 ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
           | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 795 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 747
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>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full
           insert sequence
          Length = 1242

 Score =  129 bits (65), Expect = 7e-27
 Identities = 142/169 (84%)
 Strand = Plus / Minus

                                                                       
Query: 214 atcaaggcttgagagcaatcgcaatgccgaccttcgagctcttctcgatggccttggtgt 273
           ||||||||||||| || | ||||||||||||||| |||||||| || |||||||||||||
Sbjct: 929 atcaaggcttgagggccaccgcaatgccgacctttgagctcttgtcaatggccttggtgt 870

                                                                       
Query: 274 ccacctccgccgagatggtgcagancgacttcggcctgaactcgngctggatcagcgcgc 333
           | || || || |||||||| || |  ||||| |||||  ||||| |||||| ||||||||
Sbjct: 869 caacttctgctgagatggtccacacagactttggcctccactcgtgctggagcagcgcgc 810

                                                            
Query: 334 ttgccttgccaganttgttgatgcgagccttcacnagggtgagcgggtc 382
           | |||||||| || ||||||| ||| |||||||| | ||| ||||||||
Sbjct: 809 tggccttgccggaattgttgaagcgggccttcacgacggtaagcgggtc 761
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>gb|AF178950.1|AF178950 Zea mays voltage-dependent anion channel protein 1a (vdac1a) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1179

 Score =  111 bits (56), Expect = 2e-21
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 904 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 845

                                                                       
Query: 294 cagancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttg 353
              | |||||| |||||  ||||| |||||||||| || || ||||||||||| ||||| 
Sbjct: 844 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 785

                        
Query: 354 atgcgagccttca 366
           ||||| |||||||
Sbjct: 784 atgcgggccttca 772
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>gb|AY104870.1| Zea mays PCO081914 mRNA sequence
          Length = 1445

 Score =  111 bits (56), Expect = 2e-21
 Identities = 113/133 (84%)
 Strand = Plus / Minus

                                                                        
Query: 234  gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
            ||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||||||||||
Sbjct: 1015 gcaatcccaaccttcgagctcttctcgatggtctttgtgtcgacctcggccgagatggtg 956

                                                                        
Query: 294  cagancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttg 353
               | |||||| |||||  ||||| |||||||||| || || ||||||||||| ||||| 
Sbjct: 955  accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 896

                         
Query: 354  atgcgagccttca 366
            ||||| |||||||
Sbjct: 895  atgcgggccttca 883
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>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence
          Length = 1330

 Score =  103 bits (52), Expect = 4e-19
 Identities = 112/133 (84%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| |||||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 964 gcaattccgaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 905

                                                                       
Query: 294 cagancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttg 353
              | |||||| |||||  ||||  |||||||||| ||||| || |||||||| ||||||
Sbjct: 904 accagcgactttggcctccactcatgctggatcagggcgctggctttgccagagttgttg 845

                        
Query: 354 atgcgagccttca 366
           ||||| |||||||
Sbjct: 844 atgcgtgccttca 832
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>ref|XM_475771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  || ||||
Sbjct: 815 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 756

                                                                       
Query: 303 ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
           || |||||||||||| ||||||| ||||| || ||| ||||| | ||||||| ||| |||
Sbjct: 755 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 696

                
Query: 363 ttcac 367
           |||||
Sbjct: 695 ttcac 691
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>gb|BT016888.1| Zea mays clone Contig721 mRNA sequence
          Length = 1209

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 111/133 (83%)
 Strand = Plus / Plus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || |||||||||||||||||||||| ||| | ||| ||||| |||||||||| |
Sbjct: 289 gcaatcccaaccttcgagctcttctcgatgggctttgggtcgacctcggccgagatgggg 348

                                                                       
Query: 294 cagancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttg 353
              | |||||| |||||  ||||| |||||||||| || || ||||||||||| ||||| 
Sbjct: 349 accagcgactttggcctccactcgtgctggatcagggcactggccttgccagagttgtta 408

                        
Query: 354 atgcgagccttca 366
           ||||| |||||||
Sbjct: 409 atgcgggccttca 421
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 243   accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
             ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  || ||||
Sbjct: 69046 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 68987

                                                                         
Query: 303   ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
             || |||||||||||| ||||||| ||||| || ||| ||||| | ||||||| ||| |||
Sbjct: 68986 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 68927

                  
Query: 363   ttcac 367
             |||||
Sbjct: 68926 ttcac 68922
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 243      accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
                ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  || ||||
Sbjct: 26424355 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 26424296

                                                                            
Query: 303      ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
                || |||||||||||| ||||||| ||||| || ||| ||||| | ||||||| ||| |||
Sbjct: 26424295 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 26424236

                     
Query: 363      ttcac 367
                |||||
Sbjct: 26424235 ttcac 26424231
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>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene)
          Length = 1189

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  || ||||
Sbjct: 854 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 795

                                                                       
Query: 303 ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
           || |||||||||||| ||||||| ||||| || ||| ||||| | ||||||| ||| |||
Sbjct: 794 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 735

                
Query: 363 ttcac 367
           |||||
Sbjct: 734 ttcac 730
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>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full
           insert sequence
          Length = 1231

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 105/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
           ||||| |||||||| |||||||||||||| || ||||| |  |||||||||  || ||||
Sbjct: 898 accttggagctcttgtcgatggccttggtatcaacctcagtggagatggtgacgagcgac 839

                                                                       
Query: 303 ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
           || |||||||||||| ||||||| ||||| || ||| ||||| | ||||||| ||| |||
Sbjct: 838 ttgggcctgaactcgtgctggatgagcgcactggccatgccaaagttgttgaagcgcgcc 779

                
Query: 363 ttcac 367
           |||||
Sbjct: 778 ttcac 774
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>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1129

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   |  |||
Sbjct: 889 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 830

                                                                       
Query: 303 ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
           || |||||  ||||| | |||||||| || |||||| ||||  | ||||||| ||| |||
Sbjct: 829 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 770

                
Query: 363 ttcac 367
           |||||
Sbjct: 769 ttcac 765
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>gb|AY104198.1| Zea mays PCO099812 mRNA sequence
          Length = 1156

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 104/125 (83%)
 Strand = Plus / Minus

                                                                       
Query: 243 accttcgagctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgac 302
           ||||| ||||||||||||||||||||||||||||||||||  |||||||||   |  |||
Sbjct: 923 accttagagctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgac 864

                                                                       
Query: 303 ttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttgatgcgagcc 362
           || |||||  ||||| | |||||||| || |||||| ||||  | ||||||| ||| |||
Sbjct: 863 ttgggcctccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgcc 804

                
Query: 363 ttcac 367
           |||||
Sbjct: 803 ttcac 799
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>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1175

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 109/133 (81%)
 Strand = Plus / Minus

                                                                       
Query: 234 gcaatgccgaccttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           ||||| || ||||||||||||||||| |||| ||| || || ||||| ||||||||||||
Sbjct: 959 gcaattccaaccttcgagctcttctcaatggtctttgtatcgacctcagccgagatggtg 900

                                                                       
Query: 294 cagancgacttcggcctgaactcgngctggatcagcgcgcttgccttgccaganttgttg 353
              | |||||| |||||  ||||  ||||||||||  |||| || ||||| || ||||||
Sbjct: 899 accagcgactttggcctccactcatgctggatcaggacgctggctttgcccgagttgttg 840

                        
Query: 354 atgcgagccttca 366
           ||||| |||||||
Sbjct: 839 atgcgtgccttca 827
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>ref|NM_192554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
           |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 716 agcgcgctggccatgccatagttgttgaagcgagccttcac 676



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 797 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 750
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>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds
          Length = 1203

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                       
Query: 252 ctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgacttcggcctg 311
           ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 873 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 814

                                           
Query: 312 aactcgngctggatcagcgcgcttgccttgcc 343
            ||||| ||||||| || || |||||||||||
Sbjct: 813 cactcgtgctggatgagagcacttgccttgcc 782
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 327      agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
                |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 22904768 agcgcgctggccatgccatagttgttgaagcgagccttcac 22904808



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 246      ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
                |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 22904687 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 22904734
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 327    agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
              |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 108325 agcgcgctggccatgccatagttgttgaagcgagccttcac 108365



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 246    ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
              |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 108244 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 108291
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>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel
          Length = 1174

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 251 gctcttctcgatggccttggtgtccacctc 280
           ||||||||| |||||||||||||| |||||
Sbjct: 786 gctcttctcaatggccttggtgtcaacctc 757
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>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene)
          Length = 1148

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
           |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 789 agcgcgctggccatgccatagttgttgaagcgagccttcac 749



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 870 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 823
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>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full
           insert sequence
          Length = 1151

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
           |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 794 agcgcgctggccatgccatagttgttgaagcgagccttcac 754



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 875 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 828
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>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full
           insert sequence
          Length = 1160

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
           |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 805 agcgcgctggccatgccatagttgttgaagcgagccttcac 765



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 886 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 839
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>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full
           insert sequence
          Length = 1216

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 327 agcgcgcttgccttgccaganttgttgatgcgagccttcac 367
           |||||||| ||| ||||| | ||||||| ||||||||||||
Sbjct: 849 agcgcgctggccatgccatagttgttgaagcgagccttcac 809



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 246 ttcgagctcttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||| ||||||||| || ||||||||||| |||||  | |||||||||
Sbjct: 930 ttcgtgctcttctcaattgccttggtgtcaacctcaccagagatggtg 883
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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 74/92 (80%)
 Strand = Plus / Plus

                                                                          
Query: 252    ctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgacttcggcctg 311
              ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 119488 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 119547

                                              
Query: 312    aactcgngctggatcagcgcgcttgccttgcc 343
               ||||| ||||||| || || |||||||||||
Sbjct: 119548 cactcgtgctggatgagagcacttgccttgcc 119579
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>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
            complete sequence
          Length = 54022

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 74/92 (80%)
 Strand = Plus / Minus

                                                                        
Query: 252  ctcttctcgatggccttggtgtccacctccgccgagatggtgcagancgacttcggcctg 311
            ||||| || |||||||||||||| |||||| | ||||||||  |||  ||||| || |  
Sbjct: 8730 ctcttttcaatggccttggtgtctacctccccagagatggtaaagaatgacttagggcgc 8671

                                            
Query: 312  aactcgngctggatcagcgcgcttgccttgcc 343
             ||||| ||||||| || || |||||||||||
Sbjct: 8670 cactcgtgctggatgagagcacttgccttgcc 8639
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>gb|AC108726.9| Homo sapiens 3 BAC RP11-385G14 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 36019

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   gagttcagaaaagagagggct 203
             |||||||||||||||||||||
Sbjct: 24224 gagttcagaaaagagagggct 24244
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>gb|AF411849.1|AF411849S1 Homo sapiens USH3 region, partial sequence
          Length = 198334

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 183   gagttcagaaaagagagggct 203
             |||||||||||||||||||||
Sbjct: 92910 gagttcagaaaagagagggct 92930
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>gb|DQ072165.1| Phaseolus coccineus mitochrondrial voltage-dependent
           anion-selective channel mRNA, complete cds; nuclear gene
           for mitochondrial product
          Length = 831

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 252 ctcttctcgatggccttggtgtccacctc 280
           |||||||| |||||||||||||| |||||
Sbjct: 794 ctcttctcaatggccttggtgtctacctc 766
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>ref|XM_541501.2| PREDICTED: Canis familiaris similar to Sarcoplasmic reticulum
            histidine-rich calcium-binding protein precursor
            (LOC484386), mRNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 253  tcttctcgatggccttggtgtcca 276
            ||||||| ||||||||||||||||
Sbjct: 1083 tcttctccatggccttggtgtcca 1060
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>emb|AL158209.23| Human DNA sequence from clone RP11-275N1 on chromosome 10 Contains a
             novel gene and a pseudogene similar to part of FLJ10581,
             complete sequence
          Length = 132327

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 180   tgagagttcagaaaagagag 199
             ||||||||||||||||||||
Sbjct: 29185 tgagagttcagaaaagagag 29166
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>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete
             sequence
          Length = 165525

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aaacacggcagttcttcaaatcta 99
             ||||||||||| ||||||||||||
Sbjct: 66822 aaacacggcagctcttcaaatcta 66799
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    gcttgatttcgccatcaagg 220
              ||||||||||||||||||||
Sbjct: 676426 gcttgatttcgccatcaagg 676445
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>gb|U79765.1|MCU79765 Mesembryanthemum crystallinum voltage-dependent anion-selective
           channel protein porin (VDAC) mRNA, complete cds
          Length = 1210

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 254 cttctcgatggccttggtgtccacctccgccgagatggtg 293
           |||||| |||||||||||||| ||||| || |||| ||||
Sbjct: 860 cttctcaatggccttggtgtcaacctcagcagagaaggtg 821
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>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete
              sequence
          Length = 180252

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 76     aaacacggcagttcttcaaatcta 99
              ||||||||||| ||||||||||||
Sbjct: 137881 aaacacggcagctcttcaaatcta 137904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,249,580
Number of Sequences: 3902068
Number of extensions: 2249580
Number of successful extensions: 34928
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34816
Number of HSP's gapped (non-prelim): 105
length of query: 398
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 376
effective length of database: 17,147,199,772
effective search space: 6447347114272
effective search space used: 6447347114272
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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