ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags19a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017993.1| Zea mays clone EL01N0526C07.c mRNA sequence 222 9e-55
2ref|XM_550654.1| Oryza sativa (japonica cultivar-group), mRNA 192 8e-46
3dbj|AK064315.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
4dbj|AK102929.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 7e-37
5gb|AY106044.1| Zea mays PCO067562 mRNA sequence 137 4e-29
6dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
7dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
8dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
9dbj|AK064640.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
10gb|AY109023.1| Zea mays PCO067561 mRNA sequence 90 9e-15
11ref|NM_128644.2| Arabidopsis thaliana ATCOQ3 AT2G30920 (ATCOQ3) ... 42 1.8
12gb|BC077985.1| Xenopus laevis MGC81661 protein, mRNA (cDNA clone... 42 1.8
13gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 42 1.8
14gb|AC117409.4| Homo sapiens 3 BAC RP11-64K7 (Roswell Park Cancer... 42 1.8
15emb|AL731542.6| Human DNA sequence from clone RP11-255D5 on chro... 42 1.8
16gb|AY091366.1| Arabidopsis thaliana putative dihydroxypolyprenyl... 42 1.8
17gb|AY045828.1| Arabidopsis thaliana putative dihydroxypolyprenyl... 42 1.8
18gb|AY084450.1| Arabidopsis thaliana clone 108529 mRNA, complete ... 42 1.8
19emb|Y15055.1|ATCOQ3 Arabidopsis thaliana mRNA for dihydroxypolyp... 42 1.8
20emb|AL592209.3|HS1164K7 Homo sapiens chromosome 3 from BAC RPCI-... 42 1.8
21emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chrom... 42 1.8
22gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, com... 40 7.2
23emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chr... 40 7.2
24emb|CR858931.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1423 (from cl... 40 7.2
25gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 7.2
26dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 40 7.2
27gb|AC113365.2| Homo sapiens chromosome 5 clone RP11-102H8, compl... 40 7.2
28gb|AC092373.2| Homo sapiens chromosome 5 clone RP11-5P22, comple... 40 7.2
29emb|AL115885.1|CNS01CR9 Botrytis cinerea strain T4 cDNA library 40 7.2
30emb|AL111741.1|CNS019K5 Botrytis cinerea strain T4 cDNA library 40 7.2
31dbj|AB073164.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 7.2
32gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, comp... 40 7.2
33emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on ch... 40 7.2 
>gb|BT017993.1| Zea mays clone EL01N0526C07.c mRNA sequence
          Length = 1109

 Score =  222 bits (112), Expect = 9e-55
 Identities = 244/288 (84%)
 Strand = Plus / Minus

                                                                       
Query: 233 ttcactcttcttgatgccgtacgcgatgtagtttatactagtatcatcagacagggacca 292
           ||||| |||||||| |||  | || |||||||| | |||  ||||||| |||||||||||
Sbjct: 749 ttcacccttcttgacgccaaaagcaatgtagttcacactgatatcatctgacagggacca 690

                                                                       
Query: 293 ctctctagtcaatggattgtagacgaacccggccatttcctccacggagattgaggctct 352
            |||| | |||| |||||||| |||||||| ||||| || || |||||||  || ||  |
Sbjct: 689 ttctccactcaacggattgtaaacgaaccctgccatctcttcgacggagacggaagcctt 630

                                                                       
Query: 353 ttgcagtgctaggactagctcctccggggtgactagtttggaccactcatgtgtccctat 412
           ||||||   |||||| |||||||||||||| || |||||||||||||||||||| ||| |
Sbjct: 629 ttgcagcattaggacaagctcctccggggtaaccagtttggaccactcatgtgtgcctct 570

                                                                       
Query: 413 aggaagccatctgagaatatactcagcaccaacaatggcagccgcatatgctctcattga 472
           ||||||||||||||| |||||||||||| |||| || ||||  |||||||||| ||||||
Sbjct: 569 aggaagccatctgaggatatactcagcagcaactattgcagtggcatatgctcgcattga 510

                                                           
Query: 473 ccggttgattgtagaaatcacagtggcgccattaggaactgtcaaagc 520
            ||||||||||| |||||||||||||| |||||||||| |||||||||
Sbjct: 509 tcggttgattgtggaaatcacagtggcaccattaggaattgtcaaagc 462
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>ref|XM_550654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1425

 Score =  192 bits (97), Expect = 8e-46
 Identities = 211/249 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  atcatcagacagggaccactctctagtcaatggattgtagacgaacccggccatttcctc 334
            |||||| ||||| |||||||||| |  ||  ||||| || || |||||||||||||| | 
Sbjct: 1059 atcatctgacagagaccactctccacgcagcggattatacacaaacccggccatttcttg 1000

                                                                        
Query: 335  cacggagattgaggctctttgcagtgctaggactagctcctccggggtgactagtttgga 394
             || |||||||| ||||||| ||||   ||||| |||||||| ||||| |||||||||||
Sbjct: 999  tacagagattgaagctctttccagtataaggaccagctcctcaggggtaactagtttgga 940

                                                                        
Query: 395  ccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggcagc 454
            ||||| |||||| ||| ||||||||||  | ||||||||||| ||| | || || |||| 
Sbjct: 939  ccactgatgtgtgcctttaggaagccaattaagaatatactccgcagcgactattgcagt 880

                                                                        
Query: 455  cgcatatgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgt 514
             |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 879  tgcatatgccctcattgagcggttgattgtagaaatcacagtggccccattaggaactgt 820

                     
Query: 515  caaagctga 523
            |||||||||
Sbjct: 819  caaagctga 811
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>dbj|AK064315.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C09, full
            insert sequence
          Length = 1425

 Score =  184 bits (93), Expect = 2e-43
 Identities = 210/249 (84%)
 Strand = Plus / Minus

                                                                        
Query: 275  atcatcagacagggaccactctctagtcaatggattgtagacgaacccggccatttcctc 334
            |||||| ||||| |||||||||| |  ||  ||||| || || |||||||||||||| | 
Sbjct: 1059 atcatctgacagagaccactctccacgcagcggattatacacaaacccggccatttcttg 1000

                                                                        
Query: 335  cacggagattgaggctctttgcagtgctaggactagctcctccggggtgactagtttgga 394
             || |||||||| ||||||| ||||   ||||| |||||||| ||||| |||||||||||
Sbjct: 999  tacagagattgaagctctttccagtataaggaccagctcctcaggggtaactagtttgga 940

                                                                        
Query: 395  ccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggcagc 454
            ||||| |||||| ||| ||||||||||  | ||||||||||| ||| | || || |||| 
Sbjct: 939  ccactgatgtgtgcctttaggaagccaattaagaatatactccgcagcgactattgcagt 880

                                                                        
Query: 455  cgcatatgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgt 514
             |||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 879  tgcatatgccctcattgagcggttgattgcagaaatcacagtggccccattaggaactgt 820

                     
Query: 515  caaagctga 523
            |||||||||
Sbjct: 819  caaagctga 811
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>dbj|AK102929.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114F14, full
            insert sequence
          Length = 1443

 Score =  163 bits (82), Expect = 7e-37
 Identities = 211/254 (83%), Gaps = 5/254 (1%)
 Strand = Plus / Minus

                                                                        
Query: 275  atcatcagacagggaccactctctagtcaatggattgtagacgaacccggccatttcctc 334
            |||||| ||||| |||||||||| |  ||  ||||| || || |||||||||||||| | 
Sbjct: 1085 atcatctgacagagaccactctccacgcagcggattatacacaaacccggccatttcttg 1026

                                                                        
Query: 335  cacggagattgaggctctttgcagtgctaggactagctcctcc-----ggggtgactagt 389
             || |||||||| ||||||| ||||   ||||| ||||||||      ||||| ||||||
Sbjct: 1025 tacagagattgaagctctttccagtataaggaccagctcctctcctcaggggtaactagt 966

                                                                        
Query: 390  ttggaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatg 449
            |||||||||| |||||| ||| ||||||||||  | ||||||||||| ||| | || || 
Sbjct: 965  ttggaccactgatgtgtgcctttaggaagccaattaagaatatactccgcagcgactatt 906

                                                                        
Query: 450  gcagccgcatatgctctcattgaccggttgattgtagaaatcacagtggcgccattagga 509
            ||||  |||||||| |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 905  gcagttgcatatgccctcattgagcggttgattgtagaaatcacagtggccccattagga 846

                          
Query: 510  actgtcaaagctga 523
            ||||||||||||||
Sbjct: 845  actgtcaaagctga 832
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>gb|AY106044.1| Zea mays PCO067562 mRNA sequence
          Length = 704

 Score =  137 bits (69), Expect = 4e-29
 Identities = 192/233 (82%)
 Strand = Plus / Minus

                                                                       
Query: 233 ttcactcttcttgatgccgtacgcgatgtagtttatactagtatcatcagacagggacca 292
           ||||| |||||||| |||  | || |||||||| | |||  ||||||| |||||||||||
Sbjct: 261 ttcacccttcttgacgccaaaagcaatgtagttcacactgatatcatctgacagggacca 202

                                                                       
Query: 293 ctctctagtcaatggattgtagacgaacccggccatttcctccacggagattgaggctct 352
            ||||   |||| |||||||| |||||||| ||||| || || |||||||  || ||  |
Sbjct: 201 ttctccgctcaacggattgtaaacgaaccctgccatctcttcgacggagacggaagcctt 142

                                                                       
Query: 353 ttgcagtgctaggactagctcctccggggtgactagtttggaccactcatgtgtccctat 412
           ||||||   |||||| |||||||||||||| || |||||||||||||||||||| ||| |
Sbjct: 141 ttgcagcattaggacaagctcctccggggtaaccagtttggaccactcatgtgtgcctct 82

                                                                
Query: 413 aggaagccatctgagaatatactcagcaccaacaatggcagccgcatatgctc 465
           ||||||||||||||| ||||| |||||| |||| || ||||  ||||||||||
Sbjct: 81  aggaagccatctgaggatatattcagcagcaactattgcagtggcatatgctc 29
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                           
Query: 426     agaatatactcagcaccaacaatggcagccgcatatgctctcattgaccggttgattgta 485
               ||||||||||| ||| | || || ||||  |||||||| |||||||| ||||||||||||
Sbjct: 2702846 agaatatactccgcagcgactattgcagttgcatatgccctcattgagcggttgattgta 2702787

                                                     
Query: 486     gaaatcacagtggcgccattaggaactgtcaaagctga 523
               |||||||||||||| |||||||||||||||||||||||
Sbjct: 2702786 gaaatcacagtggccccattaggaactgtcaaagctga 2702749



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                           
Query: 460     atgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgtcaaag 519
               ||||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||||||
Sbjct: 2707662 atgctcttattgagcggttgattgtagaaatcacaaaggccccattaggaactgtcaaag 2707603

                         
Query: 520     ctgatagaga 529
               |||| |||||
Sbjct: 2707602 ctgacagaga 2707593



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                           
Query: 339     gagattgaggctctttgcagtgctaggactagctcctccggggtgactagtttggaccac 398
               |||||||| ||||||| ||||   ||||| |||||||| ||||| |||||||||||||||
Sbjct: 2703516 gagattgaagctctttccagtataaggaccagctcctcaggggtaactagtttggaccac 2703457

                                    
Query: 399     tcatgtgtccctataggaagc 419
               | |||||| ||| ||||||||
Sbjct: 2703456 tgatgtgtgcctttaggaagc 2703436
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>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710H01
          Length = 187107

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 426    agaatatactcagcaccaacaatggcagccgcatatgctctcattgaccggttgattgta 485
              ||||||||||| ||| | || || ||||  |||||||| |||||||| ||||||||||||
Sbjct: 158187 agaatatactccgcagcgactattgcagttgcatatgccctcattgagcggttgattgta 158128

                                                    
Query: 486    gaaatcacagtggcgccattaggaactgtcaaagctga 523
              |||||||||||||| |||||||||||||||||||||||
Sbjct: 158127 gaaatcacagtggccccattaggaactgtcaaagctga 158090



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                          
Query: 460    atgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgtcaaag 519
              ||||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||||||
Sbjct: 163003 atgctcttattgagcggttgattgtagaaatcacaaaggccccattaggaactgtcaaag 162944

                        
Query: 520    ctgatagaga 529
              |||| |||||
Sbjct: 162943 ctgacagaga 162934



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 339    gagattgaggctctttgcagtgctaggactagctcctccggggtgactagtttggaccac 398
              |||||||| ||||||| ||||   ||||| |||||||| ||||| |||||||||||||||
Sbjct: 158857 gagattgaagctctttccagtataaggaccagctcctcaggggtaactagtttggaccac 158798

                                   
Query: 399    tcatgtgtccctataggaagc 419
              | |||||| ||| ||||||||
Sbjct: 158797 tgatgtgtgcctttaggaagc 158777
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>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0529C07
          Length = 174011

 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Minus

                                                                          
Query: 426    agaatatactcagcaccaacaatggcagccgcatatgctctcattgaccggttgattgta 485
              ||||||||||| ||| | || || ||||  |||||||| |||||||| ||||||||||||
Sbjct: 114593 agaatatactccgcagcgactattgcagttgcatatgccctcattgagcggttgattgta 114534

                                                    
Query: 486    gaaatcacagtggcgccattaggaactgtcaaagctga 523
              |||||||||||||| |||||||||||||||||||||||
Sbjct: 114533 gaaatcacagtggccccattaggaactgtcaaagctga 114496



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                          
Query: 460    atgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgtcaaag 519
              ||||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||||||
Sbjct: 119409 atgctcttattgagcggttgattgtagaaatcacaaaggccccattaggaactgtcaaag 119350

                        
Query: 520    ctgatagaga 529
              |||| |||||
Sbjct: 119349 ctgacagaga 119340



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                          
Query: 339    gagattgaggctctttgcagtgctaggactagctcctccggggtgactagtttggaccac 398
              |||||||| ||||||| ||||   ||||| |||||||| ||||| |||||||||||||||
Sbjct: 115263 gagattgaagctctttccagtataaggaccagctcctcaggggtaactagtttggaccac 115204

                                   
Query: 399    tcatgtgtccctataggaagc 419
              | |||||| ||| ||||||||
Sbjct: 115203 tgatgtgtgcctttaggaagc 115183
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>dbj|AK064640.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B04, full
            insert sequence
          Length = 1698

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 460  atgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgtcaaag 519
            ||||||| ||||| |||||||||||||||||||||  ||| |||||||||||||||||||
Sbjct: 1153 atgctcttattgagcggttgattgtagaaatcacaaaggccccattaggaactgtcaaag 1094

                      
Query: 520  ctgatagaga 529
            |||| |||||
Sbjct: 1093 ctgacagaga 1084
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>gb|AY109023.1| Zea mays PCO067561 mRNA sequence
          Length = 789

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 60/65 (92%)
 Strand = Plus / Minus

                                                                       
Query: 456 gcatatgctctcattgaccggttgattgtagaaatcacagtggcgccattaggaactgtc 515
           |||||||||| |||||| ||||||||||| |||||||||||||| |||||||||| ||||
Sbjct: 786 gcatatgctcgcattgatcggttgattgtggaaatcacagtggcaccattaggaattgtc 727

                
Query: 516 aaagc 520
           |||||
Sbjct: 726 aaagc 722
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>ref|NM_128644.2| Arabidopsis thaliana ATCOQ3 AT2G30920 (ATCOQ3) mRNA, complete cds
          Length = 1314

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 393 gaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggca 452
           |||||||  ||||| ||| |||||||||| |  ||||| ||||| || ||||||||||  
Sbjct: 902 gaccactggtgtgtgcctttaggaagccaacgtagaatgtactctgctccaacaatggtt 843

                                                
Query: 453 gccgcatatgctctcattgaccggttgattgtagaaa 489
           |  |||||||||| ||| |  || |||||||||||||
Sbjct: 842 gatgcatatgctcgcatagtgcgattgattgtagaaa 806
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>gb|BC077985.1| Xenopus laevis MGC81661 protein, mRNA (cDNA clone MGC:81661
            IMAGE:6864518), complete cds
          Length = 2821

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 436  cagcaccaacaatggcagccg 456
            |||||||||||||||||||||
Sbjct: 1447 cagcaccaacaatggcagccg 1427
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>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete genomic
              sequence, complete sequence
          Length = 174826

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 142    ttttgcttccaaaatttgtta 162
              |||||||||||||||||||||
Sbjct: 128552 ttttgcttccaaaatttgtta 128532
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>gb|AC117409.4| Homo sapiens 3 BAC RP11-64K7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154336

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    aacttctcaaagaaaacataa 68
             |||||||||||||||||||||
Sbjct: 57875 aacttctcaaagaaaacataa 57895
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>emb|AL731542.6| Human DNA sequence from clone RP11-255D5 on chromosome 10 Contains part
             of the ATE1 gene for arginyltransferase 1, complete
             sequence
          Length = 76982

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 142   ttttgcttccaaaatttgtta 162
             |||||||||||||||||||||
Sbjct: 15228 ttttgcttccaaaatttgtta 15248
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>gb|AY091366.1| Arabidopsis thaliana putative dihydroxypolyprenylbenzoate
           methyltransferase (At2g30920) mRNA, complete cds
          Length = 1000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 393 gaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggca 452
           |||||||  ||||| ||| |||||||||| |  ||||| ||||| || ||||||||||  
Sbjct: 794 gaccactggtgtgtgcctttaggaagccaacgtagaatgtactctgctccaacaatggtt 735

                                                
Query: 453 gccgcatatgctctcattgaccggttgattgtagaaa 489
           |  |||||||||| ||| |  || |||||||||||||
Sbjct: 734 gatgcatatgctcgcatagtgcgattgattgtagaaa 698
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>gb|AY045828.1| Arabidopsis thaliana putative dihydroxypolyprenylbenzoate
           methyltransferase (At2g30920) mRNA, complete cds
          Length = 1306

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 393 gaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggca 452
           |||||||  ||||| ||| |||||||||| |  ||||| ||||| || ||||||||||  
Sbjct: 902 gaccactggtgtgtgcctttaggaagccaacgtagaatgtactctgctccaacaatggtt 843

                                                
Query: 453 gccgcatatgctctcattgaccggttgattgtagaaa 489
           |  |||||||||| ||| |  || |||||||||||||
Sbjct: 842 gatgcatatgctcgcatagtgcgattgattgtagaaa 806
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>gb|AY084450.1| Arabidopsis thaliana clone 108529 mRNA, complete sequence
          Length = 1211

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 393 gaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggca 452
           |||||||  ||||| ||| |||||||||| |  ||||| ||||| || ||||||||||  
Sbjct: 901 gaccactggtgtgtgcctttaggaagccaacgtagaatgtactctgctccaacaatggtt 842

                                                
Query: 453 gccgcatatgctctcattgaccggttgattgtagaaa 489
           |  |||||||||| ||| |  || |||||||||||||
Sbjct: 841 gatgcatatgctcgcatagtgcgattgattgtagaaa 805
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>emb|Y15055.1|ATCOQ3 Arabidopsis thaliana mRNA for dihydroxypolyprenylbenzoate
           methyltransferase
          Length = 1372

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 78/97 (80%)
 Strand = Plus / Minus

                                                                       
Query: 393 gaccactcatgtgtccctataggaagccatctgagaatatactcagcaccaacaatggca 452
           |||||||  ||||| ||| |||||||||| |  ||||| ||||| || ||||||||||  
Sbjct: 874 gaccactggtgtgtgcctttaggaagccaacgtagaatgtactctgctccaacaatggtt 815

                                                
Query: 453 gccgcatatgctctcattgaccggttgattgtagaaa 489
           |  |||||||||| ||| |  || |||||||||||||
Sbjct: 814 gatgcatatgctcgcatagtgcgattgattgtagaaa 778
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>emb|AL592209.3|HS1164K7 Homo sapiens chromosome 3 from BAC RPCI-11 1164K7 map 3q21 region
             D3S3607-D3S1290, complete sequence
          Length = 154341

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 48    aacttctcaaagaaaacataa 68
             |||||||||||||||||||||
Sbjct: 96457 aacttctcaaagaaaacataa 96437
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>emb|AL844167.7| Mouse DNA sequence from clone RP23-66F6 on chromosome 2, complete
              sequence
          Length = 232834

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 48     aacttctcaaagaaaacataa 68
              |||||||||||||||||||||
Sbjct: 217058 aacttctcaaagaaaacataa 217078
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>gb|AC147140.4| Pan troglodytes BAC clone CH251-329N7 from Y, complete sequence
          Length = 149061

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    ccctacttgttagctggtct 39
             ||||||||||||||||||||
Sbjct: 39606 ccctacttgttagctggtct 39625
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>emb|AL356213.10| Human DNA sequence from clone RP5-1171F9 on chromosome Xq23-25 Contains
             part of the GRIA3 gene for glutamate receptor,
             ionotrophic, AMPA 3, complete sequence
          Length = 87793

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aacttctcaaagaaaacata 67
             ||||||||||||||||||||
Sbjct: 35181 aacttctcaaagaaaacata 35200
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>emb|CR858931.1| Pongo pygmaeus mRNA; cDNA DKFZp469J1423 (from clone DKFZp469J1423)
          Length = 2755

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   aacttctcaaagaaaacata 67
            ||||||||||||||||||||
Sbjct: 2593 aacttctcaaagaaaacata 2612
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 20      ccctacttgttagctggtct 39
               ||||||||||||||||||||
Sbjct: 3997455 ccctacttgttagctggtct 3997436
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>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 48      aacttctcaaagaaaacata 67
               ||||||||||||||||||||
Sbjct: 3910159 aacttctcaaagaaaacata 3910140
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>gb|AC113365.2| Homo sapiens chromosome 5 clone RP11-102H8, complete sequence
          Length = 81382

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aacttctcaaagaaaacata 67
             ||||||||||||||||||||
Sbjct: 78580 aacttctcaaagaaaacata 78599
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>gb|AC092373.2| Homo sapiens chromosome 5 clone RP11-5P22, complete sequence
          Length = 180941

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aacttctcaaagaaaacata 67
             ||||||||||||||||||||
Sbjct: 60408 aacttctcaaagaaaacata 60427
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>emb|AL115885.1|CNS01CR9 Botrytis cinerea strain T4 cDNA library
          Length = 720

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  gtctctcccatcaacttctc 55
           ||||||||||||||||||||
Sbjct: 397 gtctctcccatcaacttctc 378
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>emb|AL111741.1|CNS019K5 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  gtctctcccatcaacttctc 55
           ||||||||||||||||||||
Sbjct: 395 gtctctcccatcaacttctc 376
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>dbj|AB073164.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:T2N12
          Length = 87081

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    tctctcccatcaacttctca 56
             ||||||||||||||||||||
Sbjct: 14991 tctctcccatcaacttctca 14972
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>gb|AC111080.9| Mus musculus chromosome 3, clone RP23-132D7, complete sequence
          Length = 202074

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   tttatactagtatcatcaga 283
             ||||||||||||||||||||
Sbjct: 58748 tttatactagtatcatcaga 58729
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>emb|AL672004.12| Mouse DNA sequence from clone RP23-200C21 on chromosome 11, complete
             sequence
          Length = 101730

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    cccatcaacttctcaaagaa 61
             ||||||||||||||||||||
Sbjct: 41529 cccatcaacttctcaaagaa 41548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,294,364
Number of Sequences: 3902068
Number of extensions: 4294364
Number of successful extensions: 73278
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73078
Number of HSP's gapped (non-prelim): 198
length of query: 529
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 506
effective length of database: 17,143,297,704
effective search space: 8674508638224
effective search space used: 8674508638224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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