ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_193112.2| Oryza sativa (japonica cultivar-group), mRNA 313 4e-82
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 313 4e-82
3dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic D... 313 4e-82
4dbj|AK067310.1| Oryza sativa (japonica cultivar-group) cDNA clon... 313 4e-82
5dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 313 4e-82
6gb|AY111874.1| Zea mays CL37213_1 mRNA sequence 238 2e-59
7gb|AY108188.1| Zea mays PCO066395 mRNA sequence 238 2e-59
8dbj|AK061698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 3e-58
9gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequ... 48 0.038
10gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, c... 42 2.4
11dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
12dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 2.4
13dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
14gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, c... 42 2.4
15gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, compl... 42 2.4
16emb|AL691454.15| Mouse DNA sequence from clone RP23-423P8 on chr... 42 2.4
17gb|AY570977.1| Xerophyta humilis clone D2 unknown mRNA 40 9.4
18gb|AC021744.14| Homo sapiens chromosome 8, clone RP11-284H18, co... 40 9.4
19gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, comp... 40 9.4
20emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in... 40 9.4
21gb|AC009878.9| Homo sapiens chromosome 15, clone RP11-345N11, co... 40 9.4
22gb|AC022603.5|AC022603 Homo sapiens chromosome 15, clone RP11-20... 40 9.4
23gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, comple... 40 9.4
24gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, co... 40 9.4
25dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 9.4
26emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chro... 40 9.4

>ref|NM_193112.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2184

 Score =  313 bits (158), Expect = 4e-82
 Identities = 424/512 (82%), Gaps = 3/512 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
            |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 1902 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 1843

                                                                        
Query: 237  ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
            ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 1842 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 1783

                                                                        
Query: 297  ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
            || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 1782 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 1723

                                                                        
Query: 357  ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
            |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 1722 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 1663

                                                                        
Query: 417  taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
            |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 1662 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 1603

                                                                        
Query: 477  ggctcgttggttgcgatgtaaaggttccgccacg---gcttgataagcttggtgacctta 533
            ||||| ||||| || ||||| ||||| | |  ||   |||| ||||| || |  ||||||
Sbjct: 1602 ggctcattggtcgcaatgtagaggtttctcatcggctgcttaataagttttggaacctta 1543

                                                                        
Query: 534  tctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatcttcttgttcatc 593
            ||||| |  || ||||||||||| || ||||| | ||| |||||||| | |||||||   
Sbjct: 1542 tctacaagtgcctcgggtgatgtatcggcatctaggtttggatacatttgcttgttctgt 1483

                                                                        
Query: 594  gccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatcctgcccgcaatc 653
            ||||||||||||||||  ||||||| |||||| || ||||| |||||||| || ||||||
Sbjct: 1482 gccttccaccctcggatgacatgcagaccatcataatcccagtccatcctaccagcaatc 1423

                                            
Query: 654  tcagttacaatgttcatcagcctcttggactt 685
            ||||| |||||||||||||||||||| |||||
Sbjct: 1422 tcagtgacaatgttcatcagcctcttcgactt 1391



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 102  aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
            |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 1968 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 1909

             
Query: 162  c 162
            |
Sbjct: 1908 c 1908



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 33   attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
            |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 2046 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 1999



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  313 bits (158), Expect = 4e-82
 Identities = 424/512 (82%), Gaps = 3/512 (0%)
 Strand = Plus / Plus

                                                                            
Query: 177      agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
                |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 26245061 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 26245120

                                                                            
Query: 237      ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
                ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 26245121 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 26245180

                                                                            
Query: 297      ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
                || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 26245181 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 26245240

                                                                            
Query: 357      ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
                |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 26245241 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 26245300

                                                                            
Query: 417      taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
                |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 26245301 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 26245360

                                                                            
Query: 477      ggctcgttggttgcgatgtaaaggttccgccacg---gcttgataagcttggtgacctta 533
                ||||| ||||| || ||||| ||||| | |  ||   |||| ||||| || |  ||||||
Sbjct: 26245361 ggctcattggtcgcaatgtagaggtttctcatcggctgcttaataagttttggaacctta 26245420

                                                                            
Query: 534      tctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatcttcttgttcatc 593
                ||||| |  || ||||||||||| || ||||| | ||| |||||||| | |||||||   
Sbjct: 26245421 tctacaagtgcctcgggtgatgtatcggcatctaggtttggatacatttgcttgttctgt 26245480

                                                                            
Query: 594      gccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatcctgcccgcaatc 653
                ||||||||||||||||  ||||||| |||||| || ||||| |||||||| || ||||||
Sbjct: 26245481 gccttccaccctcggatgacatgcagaccatcataatcccagtccatcctaccagcaatc 26245540

                                                
Query: 654      tcagttacaatgttcatcagcctcttggactt 685
                ||||| |||||||||||||||||||| |||||
Sbjct: 26245541 tcagtgacaatgttcatcagcctcttcgactt 26245572



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 102      aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
                |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 26244995 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 26245054

                 
Query: 162      c 162
                |
Sbjct: 26245055 c 26245055



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 33       attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
                |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 26244917 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 26244964



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>dbj|AP004334.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455H11
          Length = 101607

 Score =  313 bits (158), Expect = 4e-82
 Identities = 424/512 (82%), Gaps = 3/512 (0%)
 Strand = Plus / Plus

                                                                         
Query: 177   agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
             |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 19689 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 19748

                                                                         
Query: 237   ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
             ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 19749 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 19808

                                                                         
Query: 297   ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
             || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 19809 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 19868

                                                                         
Query: 357   ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
             |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 19869 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 19928

                                                                         
Query: 417   taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
             |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 19929 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 19988

                                                                         
Query: 477   ggctcgttggttgcgatgtaaaggttccgccacg---gcttgataagcttggtgacctta 533
             ||||| ||||| || ||||| ||||| | |  ||   |||| ||||| || |  ||||||
Sbjct: 19989 ggctcattggtcgcaatgtagaggtttctcatcggctgcttaataagttttggaacctta 20048

                                                                         
Query: 534   tctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatcttcttgttcatc 593
             ||||| |  || ||||||||||| || ||||| | ||| |||||||| | |||||||   
Sbjct: 20049 tctacaagtgcctcgggtgatgtatcggcatctaggtttggatacatttgcttgttctgt 20108

                                                                         
Query: 594   gccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatcctgcccgcaatc 653
             ||||||||||||||||  ||||||| |||||| || ||||| |||||||| || ||||||
Sbjct: 20109 gccttccaccctcggatgacatgcagaccatcataatcccagtccatcctaccagcaatc 20168

                                             
Query: 654   tcagttacaatgttcatcagcctcttggactt 685
             ||||| |||||||||||||||||||| |||||
Sbjct: 20169 tcagtgacaatgttcatcagcctcttcgactt 20200



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 102   aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
             |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 19623 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 19682

              
Query: 162   c 162
             |
Sbjct: 19683 c 19683



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 33    attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
             |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 19545 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 19592



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>dbj|AK067310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102E11, full
            insert sequence
          Length = 2184

 Score =  313 bits (158), Expect = 4e-82
 Identities = 424/512 (82%), Gaps = 3/512 (0%)
 Strand = Plus / Minus

                                                                        
Query: 177  agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
            |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 1902 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 1843

                                                                        
Query: 237  ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
            ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 1842 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 1783

                                                                        
Query: 297  ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
            || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 1782 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 1723

                                                                        
Query: 357  ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
            |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 1722 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 1663

                                                                        
Query: 417  taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
            |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 1662 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 1603

                                                                        
Query: 477  ggctcgttggttgcgatgtaaaggttccgccacg---gcttgataagcttggtgacctta 533
            ||||| ||||| || ||||| ||||| | |  ||   |||| ||||| || |  ||||||
Sbjct: 1602 ggctcattggtcgcaatgtagaggtttctcatcggctgcttaataagttttggaacctta 1543

                                                                        
Query: 534  tctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatcttcttgttcatc 593
            ||||| |  || ||||||||||| || ||||| | ||| |||||||| | |||||||   
Sbjct: 1542 tctacaagtgcctcgggtgatgtatcggcatctaggtttggatacatttgcttgttctgt 1483

                                                                        
Query: 594  gccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatcctgcccgcaatc 653
            ||||||||||||||||  ||||||| |||||| || ||||| |||||||| || ||||||
Sbjct: 1482 gccttccaccctcggatgacatgcagaccatcataatcccagtccatcctaccagcaatc 1423

                                            
Query: 654  tcagttacaatgttcatcagcctcttggactt 685
            ||||| |||||||||||||||||||| |||||
Sbjct: 1422 tcagtgacaatgttcatcagcctcttcgactt 1391



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                        
Query: 102  aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
            |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 1968 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 1909

             
Query: 162  c 162
            |
Sbjct: 1908 c 1908



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 33   attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
            |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 2046 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 1999



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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E12
          Length = 152448

 Score =  313 bits (158), Expect = 4e-82
 Identities = 424/512 (82%), Gaps = 3/512 (0%)
 Strand = Plus / Plus

                                                                          
Query: 177    agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
              |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 136919 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 136978

                                                                          
Query: 237    ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
              ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 136979 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 137038

                                                                          
Query: 297    ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
              || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 137039 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 137098

                                                                          
Query: 357    ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
              |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 137099 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 137158

                                                                          
Query: 417    taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
              |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 137159 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 137218

                                                                          
Query: 477    ggctcgttggttgcgatgtaaaggttccgccacg---gcttgataagcttggtgacctta 533
              ||||| ||||| || ||||| ||||| | |  ||   |||| ||||| || |  ||||||
Sbjct: 137219 ggctcattggtcgcaatgtagaggtttctcatcggctgcttaataagttttggaacctta 137278

                                                                          
Query: 534    tctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatcttcttgttcatc 593
              ||||| |  || ||||||||||| || ||||| | ||| |||||||| | |||||||   
Sbjct: 137279 tctacaagtgcctcgggtgatgtatcggcatctaggtttggatacatttgcttgttctgt 137338

                                                                          
Query: 594    gccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatcctgcccgcaatc 653
              ||||||||||||||||  ||||||| |||||| || ||||| |||||||| || ||||||
Sbjct: 137339 gccttccaccctcggatgacatgcagaccatcataatcccagtccatcctaccagcaatc 137398

                                              
Query: 654    tcagttacaatgttcatcagcctcttggactt 685
              ||||| |||||||||||||||||||| |||||
Sbjct: 137399 tcagtgacaatgttcatcagcctcttcgactt 137430



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                          
Query: 102    aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
              |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 136853 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 136912

               
Query: 162    c 162
              |
Sbjct: 136913 c 136913



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 33     attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
              |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 136775 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 136822



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>gb|AY111874.1| Zea mays CL37213_1 mRNA sequence
          Length = 878

 Score =  238 bits (120), Expect = 2e-59
 Identities = 243/284 (85%)
 Strand = Plus / Minus

                                                                       
Query: 402 gaccaaagctccttataatcatcaagcaaatgcacatggtagtgtgacctgagcttgtca 461
           |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| 
Sbjct: 395 gaccaaagctccttgtaatcatcaagcaaatggacatggaagtgtgacctgagcttgtcg 336

                                                                       
Query: 462 aagtagtagtaaaatggctcgttggttgcgatgtaaaggttccgccacggcttgataagc 521
           |||||||  || |||||||| || ||||||||||| || |  | |  |||||| | ||||
Sbjct: 335 aagtagttatagaatggctcattagttgcgatgtagagatctctcatcggcttaacaagc 276

                                                                       
Query: 522 ttggtgaccttatctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatc 581
           ||||| |||||||| || | ||| || || || ||||| | ||||| ||| |||||||| 
Sbjct: 275 ttggtcaccttatcaacaagcgcatcaggcgacgtgtcggaatccaggtttggatacatt 216

                                                                       
Query: 582 ttcttgttcatcgccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatc 641
           | |||||||  |||||||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 215 tgcttgttctgcgccttccaccctcggacaacatgtaaaccatcgtaatcccaatccatc 156

                                                       
Query: 642 ctgcccgcaatctcagttacaatgttcatcagcctcttggactt 685
           || || ||||||||||| |||||||||||||| |||||||||||
Sbjct: 155 ctacctgcaatctcagtcacaatgttcatcagtctcttggactt 112



 Score =  165 bits (83), Expect = 2e-37
 Identities = 122/135 (90%)
 Strand = Plus / Minus

                                                                       
Query: 209 tgaactcatgtgtcacaaattgcacgtgttgattccatctttgcaatctctcgtcaggtt 268
           |||||||||||||||||| |||||||| |||||||||||||||||||| || |||| |||
Sbjct: 588 tgaactcatgtgtcacaagttgcacgtattgattccatctttgcaatcccttgtcaagtt 529

                                                                       
Query: 269 gttaaacgtttcaacctttgcctttgatctgtagaatacctcagtgtccacaatcacctt 328
           ||| ||||| ||||||| || ||| |||||||| |||||||||||||||||||||||| |
Sbjct: 528 gttgaacgtctcaacctgtgtcttcgatctgtaaaatacctcagtgtccacaatcaccct 469

                          
Query: 329 catgtaggcatcgaa 343
           ||||||||| |||||
Sbjct: 468 catgtaggcgtcgaa 454



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>gb|AY108188.1| Zea mays PCO066395 mRNA sequence
          Length = 1439

 Score =  238 bits (120), Expect = 2e-59
 Identities = 243/284 (85%)
 Strand = Plus / Minus

                                                                       
Query: 402 gaccaaagctccttataatcatcaagcaaatgcacatggtagtgtgacctgagcttgtca 461
           |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| 
Sbjct: 882 gaccaaagctccttgtaatcatcaagcaaatggacatggaagtgtgacctgagcttgtcg 823

                                                                       
Query: 462 aagtagtagtaaaatggctcgttggttgcgatgtaaaggttccgccacggcttgataagc 521
           |||||||  || |||||||| || ||||||||||| || |  | |  |||||| | ||||
Sbjct: 822 aagtagttatagaatggctcattagttgcgatgtagagatctctcatcggcttaacaagc 763

                                                                       
Query: 522 ttggtgaccttatctacgatcgcgtcgggtgatgtgtccgcatccaagttgggatacatc 581
           ||||| |||||||| |||| ||| || || || ||||| | ||||| ||| |||||||| 
Sbjct: 762 ttggtcaccttatcaacgagcgcatcaggcgacgtgtcggaatccaggtttggatacatt 703

                                                                       
Query: 582 ttcttgttcatcgccttccaccctcggaccacatgcaaaccatcgtagtcccaatccatc 641
           | |||||||  |||||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 702 tgcttgttctgcgccttccaccctcggacaacatgtaaaccgtcgtaatcccaatccatc 643

                                                       
Query: 642 ctgcccgcaatctcagttacaatgttcatcagcctcttggactt 685
           || || ||||||||||| |||||||||||||| |||||||||||
Sbjct: 642 ctacctgcaatctcagtcacaatgttcatcagtctcttggactt 599



 Score =  165 bits (83), Expect = 2e-37
 Identities = 122/135 (90%)
 Strand = Plus / Minus

                                                                        
Query: 209  tgaactcatgtgtcacaaattgcacgtgttgattccatctttgcaatctctcgtcaggtt 268
            |||||||||||||||||| |||||||| |||||||||||||||||||| || |||| |||
Sbjct: 1075 tgaactcatgtgtcacaagttgcacgtattgattccatctttgcaatcccttgtcaagtt 1016

                                                                        
Query: 269  gttaaacgtttcaacctttgcctttgatctgtagaatacctcagtgtccacaatcacctt 328
            ||| ||||| ||||||| || ||| |||||||| |||||||||||||||||||||||| |
Sbjct: 1015 gttgaacgtctcaacctgtgtcttcgatctgtaaaatacctcagtgtccacaatcaccct 956

                           
Query: 329  catgtaggcatcgaa 343
            ||||||||| |||||
Sbjct: 955  catgtaggcgtcgaa 941



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>dbj|AK061698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-D04, full
           insert sequence
          Length = 604

 Score =  234 bits (118), Expect = 3e-58
 Identities = 274/326 (84%)
 Strand = Plus / Minus

                                                                       
Query: 177 agagtatatggacaccaatagttatcacagcatgaactcatgtgtcacaaattgcacgtg 236
           |||||||||||||| |  || |||||||| || ||||||||||||||||| ||||| || 
Sbjct: 409 agagtatatggacatcgctaattatcacaacacgaactcatgtgtcacaagttgcatgta 350

                                                                       
Query: 237 ttgattccatctttgcaatctctcgtcaggttgttaaacgtttcaacctttgcctttgat 296
           ||||||||||| |||||||| ||||||| |||||| || |||||||| |  | ||||| |
Sbjct: 349 ttgattccatccttgcaatccctcgtcaagttgttgaaagtttcaacttgagtctttgct 290

                                                                       
Query: 297 ctgtagaatacctcagtgtccacaatcaccttcatgtaggcatcgaacggcacatacttc 356
           || ||||||||||| ||||||||||||||| |||| || ||||||||||||||   | ||
Sbjct: 289 ctatagaatacctctgtgtccacaatcaccctcatatatgcatcgaacggcactggcctc 230

                                                                       
Query: 357 ccattattgatcgctgtcgtctcattgtgccactcgctcgtattcgaccaaagctcctta 416
           |||  | | | || |||||| ||||||| |||||| || |||||||||||||||||||| 
Sbjct: 229 ccaccacttagcgttgtcgtttcattgtaccactcacttgtattcgaccaaagctccttg 170

                                                                       
Query: 417 taatcatcaagcaaatgcacatggtagtgtgacctgagcttgtcaaagtagtagtaaaat 476
           |||||||||||||| ||||||||  ||| |||||||||||| ||||||||||  || || 
Sbjct: 169 taatcatcaagcaagtgcacatgaaagtatgacctgagcttatcaaagtagttatagaac 110

                                     
Query: 477 ggctcgttggttgcgatgtaaaggtt 502
           ||||| ||||| || ||||| |||||
Sbjct: 109 ggctcattggtcgcaatgtagaggtt 84



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                       
Query: 102 aagatggtatgcctaatgacaaaccctggatgaagttcgcctgagttccattgcgccagc 161
           |||||| |||||||||||||||||||||||||||||||  |||| ||||| |||||||||
Sbjct: 475 aagatgatatgcctaatgacaaaccctggatgaagttcctctgaattccaatgcgccagc 416

            
Query: 162 c 162
           |
Sbjct: 415 c 415



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                           
Query: 33  attatacaaaaagaatggagggcacataatttagatgaacatgtaatg 80
           |||| |||||||||||||| ||||||||||  |||| ||| |||||||
Sbjct: 553 attacacaaaaagaatggatggcacataatccagatcaacgtgtaatg 506



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>gb|AC148239.7| Medicago truncatula clone mth2-5d7, complete sequence
          Length = 103609

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 378   tcattgtgccactcgctcgtattcgaccaaagctccttataatcatcaagcaaatg 433
             ||||||| ||| || |||| ||||  ||| || |||||||||||||||||||||||
Sbjct: 80401 tcattgtaccattcactcgaattcccccacagttccttataatcatcaagcaaatg 80346



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>gb|AC101527.12| Mus musculus chromosome 15, clone RP23-191D20, complete sequence
          Length = 193390

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 634    aatccatcctgcccgcaatctcagt 658
              |||||||||||||| ||||||||||
Sbjct: 178615 aatccatcctgcccccaatctcagt 178639



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 472      aaaatggctcgttggttgcga 492
                |||||||||||||||||||||
Sbjct: 26815595 aaaatggctcgttggttgcga 26815615



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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 67      atgaacatgtaatgcaataaa 87
               |||||||||||||||||||||
Sbjct: 1918009 atgaacatgtaatgcaataaa 1918029



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>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0516F12
          Length = 146364

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 472   aaaatggctcgttggttgcga 492
             |||||||||||||||||||||
Sbjct: 81648 aaaatggctcgttggttgcga 81668



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>gb|AC119177.11| Mus musculus chromosome 15, clone RP24-559L16, complete sequence
          Length = 246547

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 634    aatccatcctgcccgcaatctcagt 658
              |||||||||||||| ||||||||||
Sbjct: 212903 aatccatcctgcccccaatctcagt 212879



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>gb|AC123862.5| Mus musculus BAC clone RP23-356A24 from 16, complete sequence
          Length = 223030

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 434    cacatggtagtgtgacctgag 454
              |||||||||||||||||||||
Sbjct: 140588 cacatggtagtgtgacctgag 140568



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>emb|AL691454.15| Mouse DNA sequence from clone RP23-423P8 on chromosome 4 Contains the 3'
              end of the Astn2 gene for astrotactin 2 and the 3' end of
              the Pappa gene for pregnancy-associated plasma protein A,
              complete sequence
          Length = 204466

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     gagggcacataatttagatga 70
              |||||||||||||||||||||
Sbjct: 132123 gagggcacataatttagatga 132143



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>gb|AY570977.1| Xerophyta humilis clone D2 unknown mRNA
          Length = 515

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 284 ctttgcctttgatctgtaga 303
           ||||||||||||||||||||
Sbjct: 206 ctttgcctttgatctgtaga 187



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>gb|AC021744.14| Homo sapiens chromosome 8, clone RP11-284H18, complete sequence
          Length = 175636

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   aaagctccttataatcatca 425
             ||||||||||||||||||||
Sbjct: 15442 aaagctccttataatcatca 15423



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>gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, complete sequence
          Length = 181444

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 417    taatcatcaagcaaatgcac 436
              ||||||||||||||||||||
Sbjct: 123470 taatcatcaagcaaatgcac 123489



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>emb|BX324136.11| Zebrafish DNA sequence from clone DKEY-31C13 in linkage group 10,
              complete sequence
          Length = 255306

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     agttatacattatacaaaaagaat 48
              ||||| ||||||||||||||||||
Sbjct: 102304 agttacacattatacaaaaagaat 102327



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>gb|AC009878.9| Homo sapiens chromosome 15, clone RP11-345N11, complete sequence
          Length = 198372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    atacattatacaaaaagaat 48
             ||||||||||||||||||||
Sbjct: 76337 atacattatacaaaaagaat 76318



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>gb|AC022603.5|AC022603 Homo sapiens chromosome 15, clone RP11-20B10, complete sequence
          Length = 153223

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    atacattatacaaaaagaat 48
             ||||||||||||||||||||
Sbjct: 52474 atacattatacaaaaagaat 52493



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>gb|AC018880.6| Homo sapiens BAC clone RP11-336P15 from 2, complete sequence
          Length = 127025

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 29    atacattatacaaaaagaatggagggca 56
             |||||| ||||||| |||||||||||||
Sbjct: 42676 atacatcatacaaacagaatggagggca 42649



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>gb|AC021636.16| Homo sapiens chromosome 8, clone RP11-637F16, complete sequence
          Length = 148687

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  aaagctccttataatcatca 425
            ||||||||||||||||||||
Sbjct: 1011 aaagctccttataatcatca 1030



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>dbj|AP004926.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT13P22, TM0079c,
             complete sequence
          Length = 109022

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 56    acataatttagatgaa-catgtaatgcaataaatga 90
             |||||||||| ||||| ||||| |||||||||||||
Sbjct: 86322 acataatttatatgaatcatgtgatgcaataaatga 86357



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>emb|AL591366.15| Mouse DNA sequence from clone RP23-80N1 on chromosome 11, complete
             sequence
          Length = 117612

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atggtatgcctaatgacaaa 124
             ||||||||||||||||||||
Sbjct: 35991 atggtatgcctaatgacaaa 36010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,387,888
Number of Sequences: 3902068
Number of extensions: 5387888
Number of successful extensions: 93191
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 93051
Number of HSP's gapped (non-prelim): 141
length of query: 685
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 662
effective length of database: 17,143,297,704
effective search space: 11348863080048
effective search space used: 11348863080048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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