| Clone Name | rbags18k24 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RL17_PSEAE (O52761) 50S ribosomal protein L17 | 28 | 5.5 | 2 | RL17_XANCP (Q9Z3E6) 50S ribosomal protein L17 | 28 | 5.5 | 3 | RL17_HAEIN (P44355) 50S ribosomal protein L17 | 28 | 7.2 | 4 | RL17_SHIFL (P0AG47) 50S ribosomal protein L17 | 28 | 7.2 | 5 | RL17_ECOLI (P0AG44) 50S ribosomal protein L17 | 28 | 7.2 | 6 | RL17_ECOL6 (P0AG45) 50S ribosomal protein L17 | 28 | 7.2 | 7 | RL17_ECO57 (P0AG46) 50S ribosomal protein L17 | 28 | 7.2 |
|---|
>RL17_PSEAE (O52761) 50S ribosomal protein L17| Length = 129 Score = 28.5 bits (62), Expect = 5.5 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYVELV 116
>RL17_XANCP (Q9Z3E6) 50S ribosomal protein L17| Length = 127 Score = 28.5 bits (62), Expect = 5.5 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYVELV 116
>RL17_HAEIN (P44355) 50S ribosomal protein L17| Length = 128 Score = 28.1 bits (61), Expect = 7.2 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYIELV 116
>RL17_SHIFL (P0AG47) 50S ribosomal protein L17| Length = 127 Score = 28.1 bits (61), Expect = 7.2 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYIELV 116
>RL17_ECOLI (P0AG44) 50S ribosomal protein L17| Length = 127 Score = 28.1 bits (61), Expect = 7.2 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYIELV 116
>RL17_ECOL6 (P0AG45) 50S ribosomal protein L17| Length = 127 Score = 28.1 bits (61), Expect = 7.2 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYIELV 116
>RL17_ECO57 (P0AG46) 50S ribosomal protein L17| Length = 127 Score = 28.1 bits (61), Expect = 7.2 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -3 Query: 113 RRGDNAPMAYTELV 72 R GDNAPMAY ELV Sbjct: 103 RAGDNAPMAYIELV 116 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,169,067 Number of Sequences: 219361 Number of extensions: 155996 Number of successful extensions: 410 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 408 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 410 length of database: 80,573,946 effective HSP length: 13 effective length of database: 77,722,253 effective search space used: 1865334072 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)