ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18k10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550252.1| Oryza sativa (japonica cultivar-group), mRNA 123 9e-25
2dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 9e-25
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
4dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
5dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 74 7e-10
6gb|AY106078.1| Zea mays PCO121381 mRNA sequence 50 0.010
7emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 i... 46 0.16
8gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.64
9emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in ... 44 0.64
10emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, comp... 44 0.64
11gb|AC169984.2| Mus musculus BAC clone RP23-450I9 from chromosome... 42 2.5
12gb|AC125153.3| Mus musculus BAC clone RP24-378F2 from chromosome... 42 2.5
13gb|AC121894.2| Mus musculus BAC clone RP24-157H5 from 6, complet... 42 2.5
14emb|AL732596.2| Human DNA sequence from clone RP11-48D14 on chro... 42 2.5
15emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425... 42 2.5
16gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, com... 42 2.5
17gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653... 42 2.5
18emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-8... 42 2.5
19gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, com... 42 2.5
20gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosom... 42 2.5
21gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete... 40 9.9
22ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf... 40 9.9
23gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene... 40 9.9
24gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 6... 40 9.9
25gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ri... 40 9.9
26gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ri... 40 9.9
27gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal... 40 9.9
28gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA ... 40 9.9
29gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes... 40 9.9
30emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA 40 9.9
31ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 9.9
32emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chr... 40 9.9
33gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small... 40 9.9
34emb|CR450798.13| Zebrafish DNA sequence from clone DKEY-21P1 in ... 40 9.9
35gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53... 40 9.9
36dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 40 9.9
37gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 9.9
38ref|XM_687618.1| PREDICTED: Danio rerio similar to Voltage-depen... 40 9.9
39ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-asso... 40 9.9
40gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 40 9.9
41gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 9.9
42ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 ... 40 9.9
43emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and... 40 9.9
44gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 1... 40 9.9
45gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073... 40 9.9
46gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 1... 40 9.9
47gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcri... 40 9.9
48gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 inte... 40 9.9
49gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 inte... 40 9.9
50gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 9.9
51gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed s... 40 9.9
52emb|AL844218.7| Mouse DNA sequence from clone RP23-409B1 on chro... 40 9.9
53emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 40 9.9
54emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 40 9.9
55gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RN... 40 9.9
56gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RN... 40 9.9
57gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene,... 40 9.9 
>ref|XM_550252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  123 bits (62), Expect = 9e-25
 Identities = 167/202 (82%)
 Strand = Plus / Minus

                                                                       
Query: 376 agcagacgtccgtcgtctcaaggaacgtctgagtcttcaccagaatcagtgggatatagt 435
           |||||||||| ||||||||||| ||| ||||||  |||||||||||||  ||| |||| |
Sbjct: 901 agcagacgtctgtcgtctcaagaaacttctgagatttcaccagaatcaaaggggtatatt 842

                                                                       
Query: 436 caagaacaagcctcttgcactgtggttcatagttcttcgccttgctgcatgttttgaaaa 495
           |||| || | | ||||||||||  || |||| || |  ||||||||||||| ||||| ||
Sbjct: 841 caaggaccatcttcttgcactgctgtacataattatctgccttgctgcatgctttgagaa 782

                                                                       
Query: 496 gaagcccgactatctccagcttggtgttgggatctttaagcatggtaagaacttcaacaa 555
             | | |||||||||||||||   |||  ||||| || |||||| |||||||||||||||
Sbjct: 781 atatctcgactatctccagctgcatgtcaggatcctttagcatgataagaacttcaacaa 722

                                 
Query: 556 gaacatgatggcataggccgca 577
           ||||||||||||||| ||||||
Sbjct: 721 gaacatgatggcatatgccgca 700



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                       
Query: 620 gcagaggtgcgctgattcacataactcctcaggtttaagcacagaaacctccaagaagaa 679
           |||||| ||| |||||||||| ||||  |||||| | | ||  |||||||||||||||||
Sbjct: 657 gcagagatgcactgattcacagaacttttcaggtgttaccatcgaaacctccaagaagaa 598

                                                         
Query: 680 agcgggaatgtagtagtcgaccagcgtcatgcactgctgtcttaga 725
           |  ||||||||||||||| ||||| || |||||||||||| |||||
Sbjct: 597 aaggggaatgtagtagtcaaccagagtgatgcactgctgttttaga 552
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>dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N08, full
           insert sequence
          Length = 1301

 Score =  123 bits (62), Expect = 9e-25
 Identities = 167/202 (82%)
 Strand = Plus / Minus

                                                                       
Query: 376 agcagacgtccgtcgtctcaaggaacgtctgagtcttcaccagaatcagtgggatatagt 435
           |||||||||| ||||||||||| ||| ||||||  |||||||||||||  ||| |||| |
Sbjct: 901 agcagacgtctgtcgtctcaagaaacttctgagatttcaccagaatcaaaggggtatatt 842

                                                                       
Query: 436 caagaacaagcctcttgcactgtggttcatagttcttcgccttgctgcatgttttgaaaa 495
           |||| || | | ||||||||||  || |||| || |  ||||||||||||| ||||| ||
Sbjct: 841 caaggaccatcttcttgcactgctgtacataattatctgccttgctgcatgctttgagaa 782

                                                                       
Query: 496 gaagcccgactatctccagcttggtgttgggatctttaagcatggtaagaacttcaacaa 555
             | | |||||||||||||||   |||  ||||| || |||||| |||||||||||||||
Sbjct: 781 atatctcgactatctccagctgcatgtcaggatcctttagcatgataagaacttcaacaa 722

                                 
Query: 556 gaacatgatggcataggccgca 577
           ||||||||||||||| ||||||
Sbjct: 721 gaacatgatggcatatgccgca 700



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                       
Query: 620 gcagaggtgcgctgattcacataactcctcaggtttaagcacagaaacctccaagaagaa 679
           |||||| ||| |||||||||| ||||  |||||| | | ||  |||||||||||||||||
Sbjct: 657 gcagagatgcactgattcacagaacttttcaggtgttaccatcgaaacctccaagaagaa 598

                                                         
Query: 680 agcgggaatgtagtagtcgaccagcgtcatgcactgctgtcttaga 725
           |  ||||||||||||||| ||||| || |||||||||||| |||||
Sbjct: 597 aaggggaatgtagtagtcaaccagagtgatgcactgctgttttaga 552
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                    
Query: 525     ggatctttaagcatggtaagaacttcaacaagaacatgatggcataggccgca 577
               ||||| || |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 3423520 ggatcctttagcatgataagaacttcaacaagaacatgatggcatatgccgca 3423468



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                           
Query: 620     gcagaggtgcgctgattcacataactcctcaggtttaagcacagaaacctccaagaagaa 679
               |||||| ||| |||||||||| ||||  |||||| | | ||  |||||||||||||||||
Sbjct: 3423425 gcagagatgcactgattcacagaacttttcaggtgttaccatcgaaacctccaagaagaa 3423366

                                                   
Query: 680     agcgggaatgtagtagtcgaccagcgtcatgcactg 715
               |  ||||||||||||||| ||||| || ||||||||
Sbjct: 3423365 aaggggaatgtagtagtcaaccagagtgatgcactg 3423330



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                           
Query: 376     agcagacgtccgtcgtctcaaggaacgtctgagtcttcaccagaatcagtgggatatagt 435
               |||||||||| ||||||||||| ||| ||||||  |||||||||||||  ||| |||| |
Sbjct: 3424100 agcagacgtctgtcgtctcaagaaacttctgagatttcaccagaatcaaaggggtatatt 3424041

                                     
Query: 436     caagaacaagcctcttgcactg 457
               |||| || | | ||||||||||
Sbjct: 3424040 caaggaccatcttcttgcactg 3424019
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0701D05
          Length = 172161

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                   
Query: 525    ggatctttaagcatggtaagaacttcaacaagaacatgatggcataggccgca 577
              ||||| || |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 101890 ggatcctttagcatgataagaacttcaacaagaacatgatggcatatgccgca 101838



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                          
Query: 620    gcagaggtgcgctgattcacataactcctcaggtttaagcacagaaacctccaagaagaa 679
              |||||| ||| |||||||||| ||||  |||||| | | ||  |||||||||||||||||
Sbjct: 101795 gcagagatgcactgattcacagaacttttcaggtgttaccatcgaaacctccaagaagaa 101736

                                                  
Query: 680    agcgggaatgtagtagtcgaccagcgtcatgcactg 715
              |  ||||||||||||||| ||||| || ||||||||
Sbjct: 101735 aaggggaatgtagtagtcaaccagagtgatgcactg 101700



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                          
Query: 376    agcagacgtccgtcgtctcaaggaacgtctgagtcttcaccagaatcagtgggatatagt 435
              |||||||||| ||||||||||| ||| ||||||  |||||||||||||  ||| |||| |
Sbjct: 102470 agcagacgtctgtcgtctcaagaaacttctgagatttcaccagaatcaaaggggtatatt 102411

                                    
Query: 436    caagaacaagcctcttgcactg 457
              |||| || | | ||||||||||
Sbjct: 102410 caaggaccatcttcttgcactg 102389
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0028E10
          Length = 140791

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 525   ggatctttaagcatggtaagaacttcaacaagaacatgatggcataggccgca 577
             ||||| || |||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 10280 ggatcctttagcatgataagaacttcaacaagaacatgatggcatatgccgca 10228



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 81/96 (84%)
 Strand = Plus / Minus

                                                                         
Query: 620   gcagaggtgcgctgattcacataactcctcaggtttaagcacagaaacctccaagaagaa 679
             |||||| ||| |||||||||| ||||  |||||| | | ||  |||||||||||||||||
Sbjct: 10185 gcagagatgcactgattcacagaacttttcaggtgttaccatcgaaacctccaagaagaa 10126

                                                 
Query: 680   agcgggaatgtagtagtcgaccagcgtcatgcactg 715
             |  ||||||||||||||| ||||| || ||||||||
Sbjct: 10125 aaggggaatgtagtagtcaaccagagtgatgcactg 10090



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 69/82 (84%)
 Strand = Plus / Minus

                                                                         
Query: 376   agcagacgtccgtcgtctcaaggaacgtctgagtcttcaccagaatcagtgggatatagt 435
             |||||||||| ||||||||||| ||| ||||||  |||||||||||||  ||| |||| |
Sbjct: 10860 agcagacgtctgtcgtctcaagaaacttctgagatttcaccagaatcaaaggggtatatt 10801

                                   
Query: 436   caagaacaagcctcttgcactg 457
             |||| || | | ||||||||||
Sbjct: 10800 caaggaccatcttcttgcactg 10779
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>gb|AY106078.1| Zea mays PCO121381 mRNA sequence
          Length = 740

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 520 tgttgggatctttaagcatggtaagaacttcaacaagaacatgatggca 568
           ||||||| |||||||||||| ||||||  ||||||| |||||| |||||
Sbjct: 693 tgttggggtctttaagcatgataagaatctcaacaacaacatggtggca 645



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 666 acctccaagaagaaagcgggaatgtagtagtcgaccagcgtcatgcact 714
           |||||||||||||||  ||| | ||||||||| |||||||| |||||||
Sbjct: 547 acctccaagaagaaaaggggtacgtagtagtcaaccagcgtgatgcact 499
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>emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 in linkage group 2,
             complete sequence
          Length = 111186

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 651   ggtttaagcacagaaacctccaa 673
             |||||||||||||||||||||||
Sbjct: 21939 ggtttaagcacagaaacctccaa 21917
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 685    gaatgtagtagtcgaccagcgt 706
              ||||||||||||||||||||||
Sbjct: 330350 gaatgtagtagtcgaccagcgt 330329
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>emb|BX901889.4| Zebrafish DNA sequence from clone CH211-96I7 in linkage group 2, complete
              sequence
          Length = 172284

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 277    ccctgtatgattcctacacatt 298
              ||||||||||||||||||||||
Sbjct: 115852 ccctgtatgattcctacacatt 115831
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>emb|AL591517.8| Zebrafish DNA sequence from clone XX-204C9, complete sequence
          Length = 110834

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 277   ccctgtatgattcctacacatt 298
             ||||||||||||||||||||||
Sbjct: 77899 ccctgtatgattcctacacatt 77878
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>gb|AC169984.2| Mus musculus BAC clone RP23-450I9 from chromosome 6, complete sequence
          Length = 181976

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    agacaaagcctcacacaggcc 213
              |||||||||||||||||||||
Sbjct: 111586 agacaaagcctcacacaggcc 111566
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>gb|AC125153.3| Mus musculus BAC clone RP24-378F2 from chromosome 6, complete sequence
          Length = 195328

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 442   caagcctcttgcactgtggtt 462
             |||||||||||||||||||||
Sbjct: 70101 caagcctcttgcactgtggtt 70121
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>gb|AC121894.2| Mus musculus BAC clone RP24-157H5 from 6, complete sequence
          Length = 148613

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 193  agacaaagcctcacacaggcc 213
            |||||||||||||||||||||
Sbjct: 6929 agacaaagcctcacacaggcc 6909
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>emb|AL732596.2| Human DNA sequence from clone RP11-48D14 on chromosome X, complete
             sequence
          Length = 89677

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   tctgagtcttcaccagaatca 423
             |||||||||||||||||||||
Sbjct: 47297 tctgagtcttcaccagaatca 47277
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>emb|AL121749.14|HSBA425A6 Human DNA sequence from clone RP11-425A6 on chromosome 10 Contains the
             3' end of the gene for cyclin fold protein 1 (CFP1)
             (CBCP1), the gene for connexin40.1 (CX40.1) (FLJ90023),
             the FZD8 gene for frizzled homolog 8 (Drosophila) and two
             CpG islands, complete sequence
          Length = 166007

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   tctgagtcttcaccagaatca 423
             |||||||||||||||||||||
Sbjct: 49257 tctgagtcttcaccagaatca 49237
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>gb|AC069359.5| Homo sapiens chromosome 8, clone CTD-2003P13, complete sequence
          Length = 86991

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   tctgagtcttcaccagaatca 423
             |||||||||||||||||||||
Sbjct: 82476 tctgagtcttcaccagaatca 82456
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>gb|AC060765.5|AC060765 Homo sapiens chromosome 8, clone RP11-653B10, complete sequence
          Length = 170392

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 403   tctgagtcttcaccagaatca 423
             |||||||||||||||||||||
Sbjct: 17995 tctgagtcttcaccagaatca 17975
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>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 662    agaaacctccaagaagaaagc 682
              |||||||||||||||||||||
Sbjct: 171309 agaaacctccaagaagaaagc 171329
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>gb|AC105906.21| Mus musculus chromosome 7, clone RP24-81O24, complete sequence
          Length = 213004

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 31    gataaactagatacatagaagtaga 55
             |||||||||||||||||||| ||||
Sbjct: 54885 gataaactagatacatagaaataga 54861
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>gb|AC148985.4| Mus musculus BAC clone RP23-124O21 from chromosome 7, complete sequence
          Length = 190473

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 31     gataaactagatacatagaagtaga 55
              |||||||||||||||||||| ||||
Sbjct: 110543 gataaactagatacatagaaataga 110567
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>gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete cds
          Length = 1929

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 671 caagaagaaagcgggaatgt 690
           ||||||||||||||||||||
Sbjct: 642 caagaagaaagcgggaatgt 623
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>ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf53a), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 671 caagaagaaagcgggaatgt 690
           ||||||||||||||||||||
Sbjct: 562 caagaagaaagcgggaatgt 543
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>gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 49  ccagcttggtgttgggatct 68
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>gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 62425 16S ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene and internal transcribed
           spacer 2, complete sequence; and 28S ribosomal RNA gene,
           partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA (cDNA clone
           MGC:56056 IMAGE:3820465), complete cds
          Length = 1862

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 671 caagaagaaagcgggaatgt 690
           ||||||||||||||||||||
Sbjct: 572 caagaagaaagcgggaatgt 553
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>gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes and internal
           transcribed spacer 2, complete sequence
          Length = 458

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 320 ccagcttggtgttgggatct 339
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>emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA
          Length = 1402

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 506 tatctccagcttggtgttgg 525
           ||||||||||||||||||||
Sbjct: 378 tatctccagcttggtgttgg 359
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>ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (56.t00004)
           partial mRNA
          Length = 615

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 542 aagaacttcaacaagaacat 561
           ||||||||||||||||||||
Sbjct: 359 aagaacttcaacaagaacat 378
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>emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chromosome X, complete
              sequence
          Length = 117297

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 478    tgctgcatgttttgaaaaga 497
              ||||||||||||||||||||
Sbjct: 100464 tgctgcatgttttgaaaaga 100445
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>gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence; and large subunit ribosomal
           RNA gene, partial sequence
          Length = 524

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 359 ccagcttggtgttgggatct 378
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>emb|CR450798.13| Zebrafish DNA sequence from clone DKEY-21P1 in linkage group 8,
             complete sequence
          Length = 194659

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 398   gaacgtctgagtcttcacca 417
             ||||||||||||||||||||
Sbjct: 74493 gaacgtctgagtcttcacca 74474
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>gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53a) mRNA, complete
           cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 671 caagaagaaagcgggaatgt 690
           ||||||||||||||||||||
Sbjct: 562 caagaagaaagcgggaatgt 543
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>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111
          Length = 2356219

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 323    aggaattgtttccgttgttg 342
              ||||||||||||||||||||
Sbjct: 900808 aggaattgtttccgttgttg 900827
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 698     gaccagcgtcatgcactgct 717
               ||||||||||||||||||||
Sbjct: 3202810 gaccagcgtcatgcactgct 3202829
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>ref|XM_687618.1| PREDICTED: Danio rerio similar to Voltage-dependent N-type calcium
           channel alpha-1B subunit (Voltage-gated calcium channel
           alpha subunit Cav2.2) (Calcium channel, L type, alpha-1
           polypeptide isoform 5) (Brain calcium channel III)
           (BIII) (LOC564274), mRNA
          Length = 6321

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 398 gaacgtctgagtcttcacca 417
           ||||||||||||||||||||
Sbjct: 945 gaacgtctgagtcttcacca 926
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>ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-associated factor 53A
           (LOC572888), partial mRNA
          Length = 1379

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 671 caagaagaaagcgggaatgt 690
           ||||||||||||||||||||
Sbjct: 623 caagaagaaagcgggaatgt 604
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>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tacatagaagtagatacaac 61
             ||||||||||||||||||||
Sbjct: 97696 tacatagaagtagatacaac 97715
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    tacatagaagtagatacaac 61
             ||||||||||||||||||||
Sbjct: 19462 tacatagaagtagatacaac 19481
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>ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 (ENSANGG00000017099),
            partial mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 543  agaacttcaacaagaacatg 562
            ||||||||||||||||||||
Sbjct: 2066 agaacttcaacaagaacatg 2085
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>emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and ITS2, clone (16)5
          Length = 462

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 308 ccagcttggtgttgggatct 327
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>gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 320 ccagcttggtgttgggatct 339
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>gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 493

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 320 ccagcttggtgttgggatct 339
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>gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 320 ccagcttggtgttgggatct 339
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>gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 516

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 344 ccagcttggtgttgggatct 363
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>gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 515

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 346 ccagcttggtgttgggatct 365
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 512     cagcttggtgttgggatctt 531
               ||||||||||||||||||||
Sbjct: 4951094 cagcttggtgttgggatctt 4951075
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>gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369
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>emb|AL844218.7| Mouse DNA sequence from clone RP23-409B1 on chromosome 4, complete
             sequence
          Length = 197419

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 244   aaatataggaagaacaatta 263
             ||||||||||||||||||||
Sbjct: 29042 aaatataggaagaacaatta 29061
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 671    caagaagaaagcgggaatgt 690
              ||||||||||||||||||||
Sbjct: 144353 caagaagaaagcgggaatgt 144334
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 671    caagaagaaagcgggaatgt 690
              ||||||||||||||||||||
Sbjct: 142890 caagaagaaagcgggaatgt 142871
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>gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 319 ccagcttggtgttgggatct 338
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>gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 319 ccagcttggtgttgggatct 338
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>gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 28S ribosomal RNA gene, partial sequence
          Length = 1135

 Score = 40.1 bits (20), Expect = 9.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 511 ccagcttggtgttgggatct 530
           ||||||||||||||||||||
Sbjct: 350 ccagcttggtgttgggatct 369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,795,819
Number of Sequences: 3902068
Number of extensions: 6795819
Number of successful extensions: 139211
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 139003
Number of HSP's gapped (non-prelim): 204
length of query: 725
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 702
effective length of database: 17,143,297,704
effective search space: 12034594988208
effective search space used: 12034594988208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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