ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18k04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1403 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 807 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 159 2e-35
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 159 2e-35
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 159 2e-35
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 159 2e-35
7emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 86 2e-13
8ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 64 7e-07
9emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 64 7e-07
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 7e-07
11dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
12ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predic... 50 0.011
13emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 50 0.011
14dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
15dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.011
16gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.011
17gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.011
18gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.17
19emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chr... 46 0.17
20emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 44 0.67
21gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.6
22ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.6
23dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.6
24gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.6
25dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.6
26gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.6

>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1403 bits (708), Expect = 0.0
 Identities = 747/760 (98%), Gaps = 2/760 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatgcggtcctggtcttttatgatagaaataataaaatgaaaatc-taaatgagcacgt 59
           |||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 970 ttatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagcacgt 911

                                                                       
Query: 60  gagctagcagctcttattcgggacattattcgcnnnnnnngaagtgctcctattcgggac 119
           |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 910 gagctagcagctcttattcgggacattattcgcaaaaaaagaagtgctcctattcgggac 851

                                                                       
Query: 120 tataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaat 791

                                                                       
Query: 180 atgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactcc 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 atgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactcc 731

                                                                       
Query: 240 ttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaat 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaat 671

                                                                       
Query: 300 gcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatc 611

                                                                       
Query: 360 accttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 accttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcg 551

                                                                       
Query: 420 tcgttaagcataagcgtgatccactgcaagagaaccgcatctccagtgggtatactctca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tcgttaagcataagcgtgatccactgcaagagaaccgcatctccagtgggtatactctca 491

                                                                       
Query: 480 tacatatctccagccacatgttcgactcctggaagagggaggccttgggcgatgacatga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tacatatctccagccacatgttcgactcctggaagagggaggccttgggcgatgacatga 431

                                                                       
Query: 540 ggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccctagggtg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccctagggtg 371

                                                                       
Query: 600 gagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatcccttgaagcg 659
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagccggtgccacca-ccgacgtccacaagccgctgcacaccatcgaatcccttgaagcg 312

                                                                       
Query: 660 ctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtcgaacagtgt 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgtcgaacagtgt 252

                                                   
Query: 720 tcccaaccgctggttcttncccatgtactcgtagtagggc 759
           |||||||||||||||||| |||||||||||||||||||||
Sbjct: 251 tcccaaccgctggttcttccccatgtactcgtagtagggc 212



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>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  807 bits (407), Expect = 0.0
 Identities = 437/448 (97%), Gaps = 1/448 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttatgcggtcctggtcttttatgatagaaataataaaatgaaaatc-taaatgagcacgt 59
            |||||||||||  | ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4873 ttatgcggtccatggcttttatgatagaaataataaaatgaaaatcataaatgagcacgt 4814

                                                                        
Query: 60   gagctagcagctcttattcgggacattattcgcnnnnnnngaagtgctcctattcgggac 119
            |||||||||||||||||||||||||||||||||       ||||||||||||||||||||
Sbjct: 4813 gagctagcagctcttattcgggacattattcgcaaaaaaagaagtgctcctattcgggac 4754

                                                                        
Query: 120  tataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaat 179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4753 tataccactctggtacgtggatgctacttggtgaactcaagagcgtaaaagttgaagaat 4694

                                                                        
Query: 180  atgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactcc 239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4693 atgtaggttttcttgatgccaccggtaaatccagcttgtttggctagcctggcaaactcc 4634

                                                                        
Query: 240  ttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaat 299
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4633 ttctccgtcctctgctttgctcccttgaagagcacaaacatgatgatatccaaggtgaat 4574

                                                                        
Query: 300  gcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatc 359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4573 gcatcccgcgctgtgagagacgagtctgggttctccgggaggataccatccacgacgatc 4514

                                                                        
Query: 360  accttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcg 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4513 accttcccgtcttttgggagagcgttgtggcagttgcttagtattttgacgaactcgtcg 4454

                                        
Query: 420  tcgttaagcataagcgtgatccactgca 447
            ||||||||||||||||||||||||||||
Sbjct: 4453 tcgttaagcataagcgtgatccactgca 4426



 Score =  480 bits (242), Expect = e-132
 Identities = 251/253 (99%), Gaps = 1/253 (0%)
 Strand = Plus / Minus

                                                                        
Query: 507  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                                                                        
Query: 567  tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccacccgacgtccac 626
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccacc-gacgtccac 3532

                                                                        
Query: 627  aagccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcac 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3531 aagccgctgcacaccatcgaatcccttgaagcgctcgagcatcttggtgaccaggatcac 3472

                                                                        
Query: 687  agagtgctgagccatggcattgtcgaacagtgttcccaaccgctggttcttncccatgta 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3471 agagtgctgagccatggcattgtcgaacagtgttcccaaccgctggttcttccccatgta 3412

                         
Query: 747  ctcgtagtagggc 759
            |||||||||||||
Sbjct: 3411 ctcgtagtagggc 3399



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 443  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 502
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 503  gactcctg 510
            ||||||||
Sbjct: 3850 gactcctg 3843



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  159 bits (80), Expect = 2e-35
 Identities = 191/227 (84%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                           
Query: 530     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273

                                                                           
Query: 590     ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
               ||| |||||||| |||   || ||||| ||| || || ||| |||| || || |||||||
Sbjct: 5364272 ccccagggtggatccgtcacccccacc-gacatcgacgagctgctggacgccgtcgaatc 5364214

                                                                           
Query: 650     ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
               | | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||
Sbjct: 5364213 cttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggt 5364154

                                                              
Query: 710     cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtag 756
               ||||||| |  |||| |||||||||||| |||||||||||| |||||
Sbjct: 5364153 cgaacagcgcgcccagccgctggttcttccccatgtactcgaagtag 5364107



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 151     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 210
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665

                                                                           
Query: 211     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 270
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605

                                                    
Query: 271     gcacaaacatgatgatatccaaggtgaatgcatcccg 307
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 184/230 (80%), Gaps = 1/230 (0%)
 Strand = Plus / Minus

                                                                           
Query: 530     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101

                                                                           
Query: 590     ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
               ||| |||||||| |||  ||| ||||| | | || || |||||||| |  |||||||| |
Sbjct: 5172100 ccccagggtggatccgtcgcctccaccgg-catcgacgagccgctggatgccatcgaaac 5172042

                                                                           
Query: 650     ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
               | | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | ||
Sbjct: 5172041 cttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggt 5171982

                                                                 
Query: 710     cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtagggc 759
               |||||||    |||| || || |||||| || |||||||||| |||||||
Sbjct: 5171981 cgaacagcccgcccagcctcttgttcttccctatgtactcgtggtagggc 5171932



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 142     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 201
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 202     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 261
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 262     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 310
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 443     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 502
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538



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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score =  159 bits (80), Expect = 2e-35
 Identities = 191/227 (84%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                         
Query: 530   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
             ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340

                                                                         
Query: 590   ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
             ||| |||||||| |||   || ||||| ||| || || ||| |||| || || |||||||
Sbjct: 36339 ccccagggtggatccgtcacccccacc-gacatcgacgagctgctggacgccgtcgaatc 36281

                                                                         
Query: 650   ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
             | | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||
Sbjct: 36280 cttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggt 36221

                                                            
Query: 710   cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtag 756
             ||||||| |  |||| |||||||||||| |||||||||||| |||||
Sbjct: 36220 cgaacagcgcgcccagccgctggttcttccccatgtactcgaagtag 36174



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                         
Query: 151   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 210
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732

                                                                         
Query: 211   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 270
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672

                                                  
Query: 271   gcacaaacatgatgatatccaaggtgaatgcatcccg 307
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  159 bits (80), Expect = 2e-35
 Identities = 191/227 (84%), Gaps = 1/227 (0%)
 Strand = Plus / Minus

                                                                           
Query: 530     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262

                                                                           
Query: 590     ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
               ||| |||||||| |||   || ||||| ||| || || ||| |||| || || |||||||
Sbjct: 5364261 ccccagggtggatccgtcacccccacc-gacatcgacgagctgctggacgccgtcgaatc 5364203

                                                                           
Query: 650     ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
               | | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||
Sbjct: 5364202 cttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggt 5364143

                                                              
Query: 710     cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtag 756
               ||||||| |  |||| |||||||||||| |||||||||||| |||||
Sbjct: 5364142 cgaacagcgcgcccagccgctggttcttccccatgtactcgaagtag 5364096



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 151     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 210
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654

                                                                           
Query: 211     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 270
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594

                                                    
Query: 271     gcacaaacatgatgatatccaaggtgaatgcatcccg 307
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 184/230 (80%), Gaps = 1/230 (0%)
 Strand = Plus / Minus

                                                                           
Query: 530     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083

                                                                           
Query: 590     ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
               ||| |||||||| |||  ||| ||| ||| | || || |||||||| |  |||||||| |
Sbjct: 5172082 ccccagggtggatccgtcgcctcca-ccggcatcgacgagccgctggatgccatcgaaac 5172024

                                                                           
Query: 650     ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
               | | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | ||
Sbjct: 5172023 cttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggt 5171964

                                                                 
Query: 710     cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtagggc 759
               |||||||    |||| || || |||||| || |||||||||| |||||||
Sbjct: 5171963 cgaacagcccgcccagcctcttgttcttccctatgtactcgtggtagggc 5171914



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 142     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 201
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 202     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 261
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 262     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 310
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 443     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 502
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520



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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
              Nipponbare of ssp. japonica of Oryza sativa (rice),
              complete sequence
          Length = 141841

 Score =  159 bits (80), Expect = 2e-35
 Identities = 191/227 (84%), Gaps = 1/227 (0%)
 Strand = Plus / Plus

                                                                          
Query: 530    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
              ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535

                                                                          
Query: 590    ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
              ||| |||||||| |||   || ||||| ||| || || ||| |||| || || |||||||
Sbjct: 101536 ccccagggtggatccgtcacccccacc-gacatcgacgagctgctggacgccgtcgaatc 101594

                                                                          
Query: 650    ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
              | | |||||| |||||||||||| ||||||| ||||| || ||||| |||||||| | ||
Sbjct: 101595 cttggaagcgttcgagcatcttgctgaccagaatcactgaatgctgcgccatggcgtggt 101654

                                                             
Query: 710    cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtag 756
              ||||||| |  |||| |||||||||||| |||||||||||| |||||
Sbjct: 101655 cgaacagcgcgcccagccgctggttcttccccatgtactcgaagtag 101701



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 130/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 151   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 210
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143

                                                                         
Query: 211   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 270
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203

                                                  
Query: 271   gcacaaacatgatgatatccaaggtgaatgcatcccg 307
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240



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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 184/230 (80%), Gaps = 1/230 (0%)
 Strand = Plus / Plus

                                                                         
Query: 530   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
             |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498

                                                                         
Query: 590   ccctagggtggagccggtgccaccacccgacgtccacaagccgctgcacaccatcgaatc 649
             ||| |||||||| |||  ||| ||||| | | || || |||||||| |  |||||||| |
Sbjct: 91499 ccccagggtggatccgtcgcctccaccgg-catcgacgagccgctggatgccatcgaaac 91557

                                                                         
Query: 650   ccttgaagcgctcgagcatcttggtgaccaggatcacagagtgctgagccatggcattgt 709
             | | |||||| ||||||||||||  | || ||||| | |||||||| |||||||| | ||
Sbjct: 91558 cttcgaagcgttcgagcatcttgcgggcccggatcgccgagtgctgcgccatggcgtggt 91617

                                                               
Query: 710   cgaacagtgttcccaaccgctggttcttncccatgtactcgtagtagggc 759
             |||||||    |||| || || |||||| || |||||||||| |||||||
Sbjct: 91618 cgaacagcccgcccagcctcttgttcttccctatgtactcgtggtagggc 91667



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 142   gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 201
             |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 202   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 261
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 262   ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 310
             |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 443   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 502
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061



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>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 531 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 590
           |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618

                               
Query: 591 cctagggtggagccggtgcc 610
            | ||||||| |||||||||
Sbjct: 617 tccagggtggcgccggtgcc 598



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>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 531    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 590
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547

                                  
Query: 591    cctagggtggagccggtgcc 610
               | ||||||| |||||||||
Sbjct: 103546 tccagggtggcgccggtgcc 103527



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                          
Query: 531    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 590
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727

                                  
Query: 591    cctagggtggagccggtgcc 610
               | ||||||| |||||||||
Sbjct: 307726 tccagggtggcgccggtgcc 307707



 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 530     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
               ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525

                                    
Query: 590     ccctagggtggagccggtgcc 610
               | | ||||||| |||||||||
Sbjct: 5127524 ctccagggtggcgccggtgcc 5127504



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>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full
           insert sequence
          Length = 1233

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                       
Query: 534 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 593
           ||||||||||||||  |||| | |||||| |||| ||||||| | || ||||||||| | 
Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625

                            
Query: 594 agggtggagccggtgcc 610
           ||||||| |||||||||
Sbjct: 624 agggtggcgccggtgcc 608



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>ref|XM_474640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 530 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688

                                
Query: 590 ccctagggtggagccggtgcc 610
           | | ||||||| |||||||||
Sbjct: 687 ctccagggtggcgccggtgcc 667



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>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                          
Query: 530    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
              ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798

                                   
Query: 590    ccctagggtggagccggtgcc 610
              | | ||||||| |||||||||
Sbjct: 103797 ctccagggtggcgccggtgcc 103777



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>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full
           insert sequence
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 530 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714

                                
Query: 590 ccctagggtggagccggtgcc 610
           | | ||||||| |||||||||
Sbjct: 713 ctccagggtggcgccggtgcc 693



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>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full
           insert sequence
          Length = 1365

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                       
Query: 530 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 589
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701

                                
Query: 590 ccctagggtggagccggtgcc 610
           | | ||||||| |||||||||
Sbjct: 700 ctccagggtggcgccggtgcc 680



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>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 531  atgacatgaggcaggtcatagttgatgcc 559
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780



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>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.011
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 531 atgacatgaggcaggtcatagttgatgcc 559
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728



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>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 529 cgatgacatgaggcaggtcatagttgatgcc 559
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636



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>emb|AL732404.7| Mouse DNA sequence from clone RP23-177D21 on chromosome 2, complete
             sequence
          Length = 220275

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 12    tggtcttttatgatagaaataataaaa 38
             |||| ||||||||||||||||||||||
Sbjct: 96144 tggtattttatgatagaaataataaaa 96170



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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 44.1 bits (22), Expect = 0.67
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 620     cgtccacaagccgctgcacacc 641
               ||||||||||||||||||||||
Sbjct: 1987800 cgtccacaagccgctgcacacc 1987779



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>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 477    tcatacatatctccagccacatgtt 501
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784



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>ref|XM_664595.1| Plasmodium berghei strain ANKA hypothetical protein (PB108243.00.0)
           partial mRNA
          Length = 634

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 17  ttttatgatagaaataataaaatgaaaat 45
           |||||||| ||| ||||||||||||||||
Sbjct: 111 ttttatgaaagatataataaaatgaaaat 83



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>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 477  tcatacatatctccagccacatgtt 501
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048



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>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 477   tcatacatatctccagccacatgtt 501
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975



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>dbj|AB015474.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MLM24
          Length = 87487

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   tttatgatagaaataataaaa 38
            |||||||||||||||||||||
Sbjct: 9619 tttatgatagaaataataaaa 9639



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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 169    agttgaagaatatgtaggttttctt 193
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,797,273
Number of Sequences: 3902068
Number of extensions: 5797273
Number of successful extensions: 125002
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 124759
Number of HSP's gapped (non-prelim): 230
length of query: 759
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 736
effective length of database: 17,143,297,704
effective search space: 12617467110144
effective search space used: 12617467110144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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