ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags18k01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009452.1| Triticum aestivum clone wlmk8.pk0022.f7:fis, full insert mRNA sequence Length = 1996 Score = 434 bits (219), Expect = e-118 Identities = 267/283 (94%) Strand = Plus / Minus Query: 297 atgaaatgttgcaatgctcactcgctaatgttgcagaccgacatgaatttctgaactgcg 356 |||||||||| |||||||||||| |||||||||||||| ||||||||||| ||||||||| Sbjct: 1779 atgaaatgttacaatgctcactcactaatgttgcagactgacatgaatttttgaactgcg 1720 Query: 357 ttgtggtactgagttccctcccagtagagctggttgcagtcagtgcacttccagaactcc 416 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1719 ttgtggtactgagttccctcccagtagagttggttgcagtcagtgcacttccagaactcc 1660 Query: 417 atatttcggttgaagaggcatgacgggatgacctgaaaacctttggaggcttccatggct 476 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1659 atatttcggttgaagaggcatgaggggatgacctgaaaacctttggaggcttctatggct 1600 Query: 477 tcgtccagtgttagtggtttctgaatgaaaattccgttgcactttgtacatctcgacatt 536 || || || |||| |||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 1599 tcctcgagcgttaatggtttctgaatgaaacttccgttgcactttgtacatcttgacatt 1540 Query: 537 aatcggtcttcagatatctttaacttgaaggtgtcaatcacct 579 |||||||| ||||| |||||||||| ||||||||||||||||| Sbjct: 1539 aatcggtcctcagagatctttaactggaaggtgtcaatcacct 1497 Score = 186 bits (94), Expect = 7e-44 Identities = 109/114 (95%) Strand = Plus / Minus Query: 576 acctcagctagttgatcaggtttgagcaggcttttcactctgtatacttgattagtcgcc 635 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 acctcagccagttgatcatgtttgagcaggcttttcactctgtatacttgattagtcgcc 144 Query: 636 aaatactgatactttataagcttggcatctcgtgttagtaatattcttccttcc 689 ||||||| ||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 143 aaatactcatactttatgagtttggcatctcgtgttagtaatattcttccttcc 90 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Minus Query: 1 agtaaaattgcgaccgggatttgtctgagtgcatacaaggtgacattattgaaagagcag 60 ||||||||||| || |||||||||| || ||||| | |||||||||||||||||||||| Sbjct: 1891 agtaaaattgcaactgggatttgtccgaaggcatagatggtgacattattgaaagagcag 1832 Query: 61 tttcctactacatgttgaatttcacataca 90 |||||||||||||||||||||||||||||| Sbjct: 1831 tttcctactacatgttgaatttcacataca 1802
>ref|XM_477920.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 208 bits (105), Expect = 2e-50 Identities = 264/317 (83%) Strand = Plus / Minus Query: 374 ctcccagtagagctggttgcagtcagtgcacttccagaactccatatttcggttgaagag 433 |||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1446 ctcccaatagagctggttgcagtcagtgcacttccagaactccaagtttcgcttgaagag 1387 Query: 434 gcatgacgggatgacctgaaaacctttggaggcttccatggcttcgtccagtgttagtgg 493 ||| || ||||| | ||| |||||||| || ||||| || || || || ||||| || || Sbjct: 1386 gcaggaagggataatctggaaaccttttgaagcttcaatagcctcatcgagtgtgagcgg 1327 Query: 494 tttctgaatgaaaattccgttgcactttgtacatctcgacattaatcggtcttcagatat 553 ||| || ||||| |||| ||||||||||||||||||||||| | || || ||||| Sbjct: 1326 tttttggatgaatcttccattgcactttgtacatctcgacataagcttatcctcggatat 1267 Query: 554 ctttaacttgaaggtgtcaatcacctcagctagttgatcaggtttgagcaggcttttcac 613 |||||||| ||| || ||||||||||| || ||||||||| ||||||| ||||| ||||| Sbjct: 1266 ctttaactggaaagtatcaatcacctctgccagttgatcatgtttgagaaggctcttcac 1207 Query: 614 tctgtatacttgattagtcgccaaatactgatactttataagcttggcatctcgtgttag 673 ||||||||| || ||| | | |||||| ||||| |||| |||||| |||||| ||| || Sbjct: 1206 tctgtatacctggttacttgtcaaatattgatattttaagagcttgacatctcttgtaag 1147 Query: 674 taatattcttccttcct 690 ||||| ||||| ||||| Sbjct: 1146 taatactcttctttcct 1130
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 141 bits (71), Expect = 3e-30 Identities = 140/163 (85%) Strand = Plus / Minus Query: 373 cctcccagtagagctggttgcagtcagtgcacttccagaactccatatttcggttgaaga 432 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 15546556 cctcccaatagagctggttgcagtcagtgcacttccagaactccaagtttcgcttgaaga 15546497 Query: 433 ggcatgacgggatgacctgaaaacctttggaggcttccatggcttcgtccagtgttagtg 492 |||| || ||||| | ||| |||||||| || ||||| || || || || ||||| || | Sbjct: 15546496 ggcaggaagggataatctggaaaccttttgaagcttcaatagcctcatcgagtgtgagcg 15546437 Query: 493 gtttctgaatgaaaattccgttgcactttgtacatctcgacat 535 |||| || ||||| |||| ||||||||||||||||||||||| Sbjct: 15546436 gtttttggatgaatcttccattgcactttgtacatctcgacat 15546394 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 576 acctcagctagttgatcaggtttgagcaggcttttcactctgtatacttgattagtcgcc 635 ||||| || ||||||||| ||||||| ||||| |||||||||||||| || ||| | | | Sbjct: 15545853 acctctgccagttgatcatgtttgagaaggctcttcactctgtatacctggttacttgtc 15545794 Query: 636 aaatactgatactttataagcttggcatctcgtgttagtaatattcttccttcct 690 ||||| ||||| |||| |||||| |||||| ||| ||||||| ||||| ||||| Sbjct: 15545793 aaatattgatattttaagagcttgacatctcttgtaagtaatactcttctttcct 15545739 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 313 ctcactcgctaatgttgcagaccgacatgaatttctgaactgcgttgtggtactgagttc 372 |||| |||||||||||||| || |||| || ||||||||||| |||||||| ||||| | Sbjct: 15546690 ctcagtcgctaatgttgcatactgacaaaaacttctgaactgcattgtggtattgagtac 15546631 Query: 373 cct 375 ||| Sbjct: 15546630 cct 15546628 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 atggaacagagggagtacaaa 174 ||||||||||||||||||||| Sbjct: 24741078 atggaacagagggagtacaaa 24741058 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| |||||||||||||| |||| Sbjct: 8073768 ataatatgaaacagagggagtactaaac 8073741
>dbj|AP005737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062P14 Length = 168223 Score = 141 bits (71), Expect = 3e-30 Identities = 140/163 (85%) Strand = Plus / Minus Query: 373 cctcccagtagagctggttgcagtcagtgcacttccagaactccatatttcggttgaaga 432 ||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 65039 cctcccaatagagctggttgcagtcagtgcacttccagaactccaagtttcgcttgaaga 64980 Query: 433 ggcatgacgggatgacctgaaaacctttggaggcttccatggcttcgtccagtgttagtg 492 |||| || ||||| | ||| |||||||| || ||||| || || || || ||||| || | Sbjct: 64979 ggcaggaagggataatctggaaaccttttgaagcttcaatagcctcatcgagtgtgagcg 64920 Query: 493 gtttctgaatgaaaattccgttgcactttgtacatctcgacat 535 |||| || ||||| |||| ||||||||||||||||||||||| Sbjct: 64919 gtttttggatgaatcttccattgcactttgtacatctcgacat 64877 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 576 acctcagctagttgatcaggtttgagcaggcttttcactctgtatacttgattagtcgcc 635 ||||| || ||||||||| ||||||| ||||| |||||||||||||| || ||| | | | Sbjct: 64336 acctctgccagttgatcatgtttgagaaggctcttcactctgtatacctggttacttgtc 64277 Query: 636 aaatactgatactttataagcttggcatctcgtgttagtaatattcttccttcct 690 ||||| ||||| |||| |||||| |||||| ||| ||||||| ||||| ||||| Sbjct: 64276 aaatattgatattttaagagcttgacatctcttgtaagtaatactcttctttcct 64222 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 313 ctcactcgctaatgttgcagaccgacatgaatttctgaactgcgttgtggtactgagttc 372 |||| |||||||||||||| || |||| || ||||||||||| |||||||| ||||| | Sbjct: 65173 ctcagtcgctaatgttgcatactgacaaaaacttctgaactgcattgtggtattgagtac 65114 Query: 373 cct 375 ||| Sbjct: 65113 cct 65111
>gb|AY109922.1| Zea mays CL803_1 mRNA sequence Length = 1598 Score = 133 bits (67), Expect = 8e-28 Identities = 196/239 (82%) Strand = Plus / Minus Query: 321 ctaatgttgcagaccgacatgaatttctgaactgcgttgtggtactgagttccctcccag 380 ||||||||||| || |||| ||| | || ||||| |||||||||||||| ||||||||| Sbjct: 1361 ctaatgttgcacactgacaagaacctttggactgcattgtggtactgagtcccctcccag 1302 Query: 381 tagagctggttgcagtcagtgcacttccagaactccatatttcggttgaagaggcatgac 440 ||||| |||||||| || ||||||||||||||||||| |||||||||||| | ||| | Sbjct: 1301 tagagttggttgcaatcggtgcacttccagaactccagatttcggttgaacaagcacgtg 1242 Query: 441 gggatgacctgaaaacctttggaggcttccatggcttcgtccagtgttagtggtttctga 500 || || | ||| |||||||| |||||||| | ||||| || || || |||||||||||| Sbjct: 1241 ggaataatctggaaaccttttgaggcttcaacagcttcctctagggtaagtggtttctga 1182 Query: 501 atgaaaattccgttgcactttgtacatctcgacattaatcggtcttcagatatctttaa 559 || || | || ||||| ||||| || |||||||| | | |||| ||||| |||||||| Sbjct: 1181 ataaagctaccattgcattttgtgcacctcgacataagttggtcctcagaaatctttaa 1123 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 654 agcttggcatctcgtgttagtaatattcttccttcct 690 ||||||||||| ||||||| ||||||||||||||||| Sbjct: 1073 agcttggcatcccgtgttaataatattcttccttcct 1037
>ref|NM_122342.2| Arabidopsis thaliana 3'-5' exonuclease/ nucleic acid binding AT5G24340 mRNA, complete cds Length = 1759 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 338 catgaatttctgaactgcgttgtggtactgagttccctcccagta 382 |||||| ||||| |||||||| || |||||||||||||||||||| Sbjct: 1517 catgaacttctggactgcgttatgatactgagttccctcccagta 1473
>gb|BT006449.1| Arabidopsis thaliana At5g24340 gene, complete cds Length = 1518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 338 catgaatttctgaactgcgttgtggtactgagttccctcccagta 382 |||||| ||||| |||||||| || |||||||||||||||||||| Sbjct: 1494 catgaacttctggactgcgttatgatactgagttccctcccagta 1450
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaa 174 |||||||||||||||||||||||||| Sbjct: 19641396 ataatatggaacagagggagtacaaa 19641371 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| ||| ||||||||||||||| Sbjct: 8188602 ataatatgaaacggagggagtacaaaac 8188575
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaa 174 |||||||||||||||||||||||||| Sbjct: 19567610 ataatatggaacagagggagtacaaa 19567585 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| ||| ||||||||||||||| Sbjct: 8188483 ataatatgaaacggagggagtacaaaac 8188456
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaaa 174 |||||||||||||||||||||||||| Sbjct: 85597 ataatatggaacagagggagtacaaa 85622
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaa 173 ||||||||||||||||||||||||| Sbjct: 10923967 ataatatggaacagagggagtacaa 10923943
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05, from chromosome 3, complete sequence Length = 127348 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaa 173 ||||||||||||||||||||||||| Sbjct: 57062 ataatatggaacagagggagtacaa 57086
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaa 173 ||||||||||||||||||||||||| Sbjct: 10922068 ataatatggaacagagggagtacaa 10922044
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 aataatatggaacagagggagtacaaaa 175 ||||||||||| |||||||||||||||| Sbjct: 3149772 aataatatggagcagagggagtacaaaa 3149799 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagta 170 |||||||||||||||||||||| Sbjct: 8431804 ataatatggaacagagggagta 8431783 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tatggaacagagggagtaca 172 |||||||||||||||||||| Sbjct: 1654881 tatggaacagagggagtaca 1654862
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 143 tgacaaataatatggaacagagggagta 170 |||| ||||||||||||||||||||||| Sbjct: 27385373 tgactaataatatggaacagagggagta 27385346 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 taatatggaacagagggagtac 171 |||||||||||||||||||||| Sbjct: 21389116 taatatggaacagagggagtac 21389095 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggaacagagggagtacaaa 174 |||||||||||||||||||| Sbjct: 11128706 tggaacagagggagtacaaa 11128687
>dbj|AP003905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1177_E11 Length = 92375 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 aataatatggaacagagggagtacaaaa 175 ||||||||||| |||||||||||||||| Sbjct: 5852 aataatatggagcagagggagtacaaaa 5879
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Minus Query: 140 cagtgacaaataatatggaacagagggagtac 171 ||||||||| ||||||||||| |||||||||| Sbjct: 8432 cagtgacaagtaatatggaacggagggagtac 8401
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 143 tgacaaataatatggaacagagggagta 170 |||| ||||||||||||||||||||||| Sbjct: 4442 tgactaataatatggaacagagggagta 4415
>dbj|AP003635.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0686E06 Length = 150474 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Minus Query: 143 tgacaaataatatggaacagagggagta 170 |||| ||||||||||||||||||||||| Sbjct: 128200 tgactaataatatggaacagagggagta 128173
>dbj|AP003940.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1066_B03 Length = 115339 Score = 48.1 bits (24), Expect = 0.039 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 aataatatggaacagagggagtacaaaa 175 ||||||||||| |||||||||||||||| Sbjct: 109256 aataatatggagcagagggagtacaaaa 109283
>gb|AC133710.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0002A19, complete sequence Length = 139052 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 aatatggaacagagggagtacaaaaca 177 ||||||||||||||| ||||||||||| Sbjct: 17456 aatatggaacagaggaagtacaaaaca 17482
>gb|AC136491.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062E06, complete sequence Length = 158842 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 aatatggaacagagggagtacaaaaca 177 ||||||||||||||| ||||||||||| Sbjct: 145916 aatatggaacagaggaagtacaaaaca 145942
>emb|AJ277378.1|TTU277378 Triticum turgidum subsp. durum Pdi gene for protein disulfide isomerase, exons 1-8, clone pPDIGW2VT Length = 2721 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 141 agtgacaaataatatggaacagaggga 167 |||||||| |||||||||||||||||| Sbjct: 1323 agtgacaactaatatggaacagaggga 1349
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 140 cagtgacaaataatatggaacagagggagta 170 ||||||||| ||||||| ||||||||||||| Sbjct: 14328 cagtgacaattaatatgtaacagagggagta 14358
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 aatatggaacagagggagtacaaaaca 177 ||||||||||||||| ||||||||||| Sbjct: 17856265 aatatggaacagaggaagtacaaaaca 17856291 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 17234706 aatatggaacagagggagta 17234687
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaaaa 175 |||||||| |||||||||||||||||| Sbjct: 29235623 ataatatgaaacagagggagtacaaaa 29235649
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaaaa 175 |||||||| |||||||||||||||||| Sbjct: 14486 ataatatgaaacagagggagtacaaaa 14512
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaaaa 175 |||||||| |||||||||||||||||| Sbjct: 81410 ataatatgaaacagagggagtacaaaa 81436
>emb|AJ868103.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide isomerase, exons 1-10, clone GPDI-4B Length = 3527 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 141 agtgacaaataatatggaacagaggga 167 |||||||| |||||||||||||||||| Sbjct: 1354 agtgacaactaatatggaacagaggga 1380
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 151 aatatggaacagagggagtacaaaaca 177 ||||||||||||||| ||||||||||| Sbjct: 17950581 aatatggaacagaggaagtacaaaaca 17950607 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 17329892 aatatggaacagagggagta 17329873
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tatggaacagagggagtacaaaacaa 178 |||||||| ||||||||||||||||| Sbjct: 20999277 tatggaacggagggagtacaaaacaa 20999302 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 taatatggaacagagggagtac 171 |||||||||||||||||||||| Sbjct: 13093995 taatatggaacagagggagtac 13094016 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 tatggaacagagggagtacaaaaca 177 ||||| ||||||||||||||||||| Sbjct: 8123572 tatgggacagagggagtacaaaaca 8123596 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 24540899 aatatggaacagagggagta 24540880
>dbj|AP003907.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1217_D10 Length = 103188 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagta 170 |||||||||||||||||||||| Sbjct: 47521 ataatatggaacagagggagta 47500
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 150 taatatggaacagagggagtac 171 |||||||||||||||||||||| Sbjct: 23616 taatatggaacagagggagtac 23595
>dbj|AP004876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0470G10 Length = 145419 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tatggaacagagggagtacaaaacaa 178 |||||||| ||||||||||||||||| Sbjct: 122749 tatggaacggagggagtacaaaacaa 122774
>dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 150 taatatggaacagagggagtac 171 |||||||||||||||||||||| Sbjct: 70572 taatatggaacagagggagtac 70593
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 tatggaacagagggagtacaaaacaa 178 |||||||| ||||||||||||||||| Sbjct: 1022 tatggaacggagggagtacaaaacaa 1047
>dbj|AB016884.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16H17 Length = 45529 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 338 catgaatttctgaactgcgttgtggtactgagttccct 375 |||||| ||||| |||||||| || ||||||||||||| Sbjct: 3502 catgaacttctggactgcgttatgatactgagttccct 3465
>gb|AC147462.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1110B01, complete sequence Length = 160142 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaa 173 |||||||| |||||||||||||||| Sbjct: 6979 ataatatgaaacagagggagtacaa 7003
>gb|AY544178.1|AY544177S2 Triticum aestivum protein disulfide isomerase (PDI4D) gene, exons 4, 5 and partial cds Length = 441 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 agtgacaaataatatggaacagagggagt 169 |||||||| |||| ||||||||||||||| Sbjct: 227 agtgacaagtaatctggaacagagggagt 255
>gb|AY544169.1| Aegilops tauschii protein disulfide isomerase (PDI4D) gene, complete cds Length = 3526 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 agtgacaaataatatggaacagagggagt 169 |||||||| |||| ||||||||||||||| Sbjct: 1367 agtgacaagtaatctggaacagagggagt 1395
>emb|AL162725.10| Human DNA sequence from clone RP11-132E11 on chromosome 9 Contains a novel gene, the 5' end of a novel gene (FLJ25636), a ribosomal protein S29 (RPS29) pseudogene, a ribosomal protein L31 (RPL31) pseudogene and a CpG island, complete sequence Length = 143223 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 644 atactttataagcttggcatc 664 ||||||||||||||||||||| Sbjct: 115609 atactttataagcttggcatc 115629
>emb|AL035604.16|HS38C16 Human DNA sequence from clone RP1-38C16 on chromosome 6q22.33-24.1 Contains a glyceraldehde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel gene, a high-mobility group (non-histone chromosomal) protein 1-like 1 (HMG1L1) pseudogene and a novel gene, complete sequence Length = 139515 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 ccaaccaaataaaaaggcctg 244 ||||||||||||||||||||| Sbjct: 93567 ccaaccaaataaaaaggcctg 93587
>ref|XM_967752.1| PREDICTED: Tribolium castaneum similar to CG11390-PA (LOC661601), mRNA Length = 375 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 172 aaaacaacatgagcacatgta 192 ||||||||||||||||||||| Sbjct: 47 aaaacaacatgagcacatgta 27
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtacaa 173 |||||||| |||||||||||||||| Sbjct: 21413896 ataatatgaaacagagggagtacaa 21413920 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 25930500 ataatatgaaacagagggagtaca 25930523 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 17535121 ataatatgaaacagagggagtaca 17535144 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacagagggagtacaaaaca 177 |||||||||||||||||||| Sbjct: 7705995 aacagagggagtacaaaaca 7706014
>gb|AC018846.5| Homo sapiens chromosome 16 clone RP11-370P15, complete sequence Length = 175519 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 acaacatgagcacatgtacat 195 ||||||||||||||||||||| Sbjct: 133563 acaacatgagcacatgtacat 133543
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 153 tatggaacagagggagtacaaaaca 177 ||||| ||||||||||||||||||| Sbjct: 111765 tatgggacagagggagtacaaaaca 111789
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 atggaacagagggagtacaaa 174 ||||||||||||||||||||| Sbjct: 97015 atggaacagagggagtacaaa 96995
>emb|AJ868104.1| Triticum aestivum subsp. aestivum PDI gene for protein disulfide isomerase, exons 1-10, clone GPDI-4D Length = 3466 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 141 agtgacaaataatatggaacagagggagt 169 |||||||| |||| ||||||||||||||| Sbjct: 1340 agtgacaagtaatctggaacagagggagt 1368
>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05, complete sequence Length = 129021 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 109508 aatatggaacagagggagta 109489
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 26037 aatatggaacagagggagta 26018
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 74759 ataatatgaaacagagggagtaca 74782
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 34728 ataatatgaaacagagggagtaca 34751
>gb|AC161284.2| Pan troglodytes BAC clone CH251-341A21 from chromosome 7, complete sequence Length = 153042 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tagtggtttctgaatgaaaa 507 |||||||||||||||||||| Sbjct: 86378 tagtggtttctgaatgaaaa 86397
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 64926 ataatatgaaacagagggagtaca 64949
>gb|AC002065.2| Homo sapiens BAC clone CTB-21N8 from 7, complete sequence Length = 117954 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tagtggtttctgaatgaaaa 507 |||||||||||||||||||| Sbjct: 84085 tagtggtttctgaatgaaaa 84104
>gb|AC004862.1| Homo sapiens PAC clone RP4-697H17 from 7, complete sequence Length = 158811 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 136 tccccagtgacaaataatatggaa 159 |||| ||||||||||||||||||| Sbjct: 52420 tccctagtgacaaataatatggaa 52443
>emb|AL451074.13| Human DNA sequence from clone RP11-466F5 on chromosome 1 Contains the 3' end of the MGST3 gene for microsomal glutathione S-transferase 3, the ALDH9A1 gene for aldehyde dehydrogenase 9 family (member A1), a ribosomal protein S13 (RPS13) pseudogene, a ribosomal protein L21 (RPL21) pseudogene, two novel genes (FLJ42974), a carbonic anhydrase XIV (CA14) pseudogene, the gene for putative membrane protein (LOC54499), a ribosomal protein L26 (RPL26) pseudogene, the 5' end of (tbc), the 5' end of the UMPK gene for uridine monophosphate kinase and two CpG islands, complete sequence Length = 188217 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 tgttgaatttcacatacaccctct 96 |||||||||| ||||||||||||| Sbjct: 175100 tgttgaatttgacatacaccctct 175077
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 caaggtgacattattgaaag 55 |||||||||||||||||||| Sbjct: 207804 caaggtgacattattgaaag 207785
>emb|AL662995.2|OSJN00202 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032D24, complete sequence Length = 132465 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 gacaaataatatggaacagagggagtacaaaa 175 ||||||||||||||||| |||| |||| |||| Sbjct: 8399 gacaaataatatggaacggaggtagtagaaaa 8430
>emb|AL662955.3|OSJN00158 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019J05, complete sequence Length = 185211 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 gacaaataatatggaacagagggagtacaaaa 175 ||||||||||||||||| |||| |||| |||| Sbjct: 159257 gacaaataatatggaacggaggtagtagaaaa 159288
>gb|AC163387.2| Mus musculus chromosome 1, clone RP24-181G14, complete sequence Length = 194188 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 tgtggtgatggaatccctgg 275 |||||||||||||||||||| Sbjct: 17865 tgtggtgatggaatccctgg 17884
>gb|AC021755.9| Homo sapiens chromosome 15 clone RP11-521C20 map 15q15, complete sequence Length = 161794 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgacctgaaaacctttggag 464 |||||||||||||||||||| Sbjct: 135100 tgacctgaaaacctttggag 135081
>gb|AC025429.6| Homo sapiens chromosome 15 clone CTD-2006D8 map 15q14, complete sequence Length = 142698 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 tgacctgaaaacctttggag 464 |||||||||||||||||||| Sbjct: 35918 tgacctgaaaacctttggag 35899
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 144 gacaaataatatggaacagagggagtacaaaa 175 ||||||||||||||||| |||| |||| |||| Sbjct: 12334373 gacaaataatatggaacggaggtagtagaaaa 12334404
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 12975843 ataatatgaaacagagggagtaca 12975866 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 5897846 aatatggaacagagggagta 5897865
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 20836237 ataatatgaaacagagggagtaca 20836260
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 caaggtgacattattgaaag 55 |||||||||||||||||||| Sbjct: 1602029 caaggtgacattattgaaag 1602010
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttgcgaccgggatttgtctg 27 |||||||||||||||||||| Sbjct: 4364108 ttgcgaccgggatttgtctg 4364127
>dbj|AP005748.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0042E12 Length = 164688 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggaacagagggagtacaaa 174 |||||||||||||||||||| Sbjct: 3528 tggaacagagggagtacaaa 3509
>dbj|AP004007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1217_C01 Length = 100180 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tggaacagagggagtacaaa 174 |||||||||||||||||||| Sbjct: 58612 tggaacagagggagtacaaa 58593
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 28463 ataatatgaaacagagggagtaca 28486
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 111266 ataatatgaaacagagggagtaca 111289
>dbj|AP003754.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1341_A08 Length = 128955 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| |||||||||||||| |||| Sbjct: 111965 ataatatgaaacagagggagtactaaac 111938
>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_C08 Length = 117923 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| |||||||||||||| |||| Sbjct: 7540 ataatatgaaacagagggagtactaaac 7513
>dbj|AP003980.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1014_H03 Length = 132696 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 55000 aatatggaacagagggagta 54981
>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0582D05 Length = 150483 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 tatggaacagagggagtaca 172 |||||||||||||||||||| Sbjct: 54381 tatggaacagagggagtaca 54362
>gb|AC103897.3| Papio anubis clone RP41-461D5, complete sequence Length = 156269 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 tagtggtttctgaatgaaaa 507 |||||||||||||||||||| Sbjct: 58612 tagtggtttctgaatgaaaa 58631
>gb|AC124395.5| Mus musculus BAC clone RP24-342J3 from 13, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 tacaaggtgacattattgaa 53 |||||||||||||||||||| Sbjct: 145408 tacaaggtgacattattgaa 145427
>emb|Z49661.1|SCYJR161C S.cerevisiae chromosome X reading frame ORF YJR161c Length = 5094 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 tagtcgccaaatactgatac 647 |||||||||||||||||||| Sbjct: 2209 tagtcgccaaatactgatac 2190
>emb|Z49660.1|SCYJR160C S.cerevisiae chromosome X reading frame ORF YJR160c Length = 5730 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 tagtcgccaaatactgatac 647 |||||||||||||||||||| Sbjct: 4908 tagtcgccaaatactgatac 4889
>emb|Z74296.1|SCYDL248W S.cerevisiae chromosome IV reading frame ORF YDL248w Length = 5984 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 tagtcgccaaatactgatac 647 |||||||||||||||||||| Sbjct: 3776 tagtcgccaaatactgatac 3795
>emb|Z74295.1|SCYDL247W S.cerevisiae chromosome IV reading frame ORF YDL247w Length = 5729 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 628 tagtcgccaaatactgatac 647 |||||||||||||||||||| Sbjct: 823 tagtcgccaaatactgatac 842
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 149 ataatatggaacagagggagtaca 172 |||||||| ||||||||||||||| Sbjct: 12983183 ataatatgaaacagagggagtaca 12983206 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 aatatggaacagagggagta 170 |||||||||||||||||||| Sbjct: 5899032 aatatggaacagagggagta 5899051
>emb|AL731750.3|CNS08C7Z Oryza sativa chromosome 12, . BAC OJ1055_H05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113332 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ataatatggaacagagggagtacaaaac 176 |||||||| ||| ||||||||||||||| Sbjct: 64647 ataatatgaaacggagggagtacaaaac 64620
>gb|U93166.1|PAU93166 Prunus armeniaca cysteine protease mRNA, complete cds Length = 1444 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 tcggagaacaacaacaatgg 214 |||||||||||||||||||| Sbjct: 66 tcggagaacaacaacaatgg 85
>gb|AC161443.14| Mus musculus chromosome 1, clone RP23-404K2, complete sequence Length = 186144 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 tgtggtgatggaatccctgg 275 |||||||||||||||||||| Sbjct: 39891 tgtggtgatggaatccctgg 39872
>gb|AC132487.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0499F10, complete sequence Length = 75032 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacagagggagtacaaaaca 177 |||||||||||||||||||| Sbjct: 16503 aacagagggagtacaaaaca 16522
>emb|AL928582.5| Mouse DNA sequence from clone RP23-235B20 on chromosome X, complete sequence Length = 94729 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggaatccctggagcaagttg 284 |||||||||||||||||||| Sbjct: 84019 ggaatccctggagcaagttg 84038 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,884,565 Number of Sequences: 3902068 Number of extensions: 6884565 Number of successful extensions: 116082 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 114299 Number of HSP's gapped (non-prelim): 1782 length of query: 690 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 667 effective length of database: 17,143,297,704 effective search space: 11434579568568 effective search space used: 11434579568568 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
