ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18j22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds 196 7e-47
2emb|AJ250665.1|HVU250665 Hordeum vulgare partial mRNA for putati... 121 3e-24
3gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
6gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
7dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
8dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
9dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
10dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
12dbj|AK100760.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
13dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 1e-08
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 70 1e-08
15emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb... 70 1e-08
16gb|BT018406.1| Zea mays clone EL01N0326A05.d mRNA sequence 48 0.037
17gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 46 0.15
18gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome 46 0.15
19emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chr... 44 0.58
20gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complet... 44 0.58
21gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, comple... 44 0.58
22gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 2.3
23gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 2.3
24gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, c... 42 2.3
25gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosph... 42 2.3
26dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
27dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
28gb|AY111776.1| Zea mays CL39796_1 mRNA sequence 42 2.3
29gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
30ref|NM_112195.2| Arabidopsis thaliana ATP binding / aspartate-tR... 40 9.1
31gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome... 40 9.1
32gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome... 40 9.1
33gb|DQ215467.1| Taeniopygia guttata clone 0058P0010H07 MGC15397 v... 40 9.1
34ref|NM_001030604.1| Gallus gallus SLIT-ROBO Rho GTPase activatin... 40 9.1
35ref|XM_469478.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.1
36ref|NM_015209.1| Homo sapiens kazrin (KIAA1026), transcript vari... 40 9.1
37ref|XM_513047.1| PREDICTED: Pan troglodytes similar to KIAA1026 ... 40 9.1
38gb|BC050920.1| Mus musculus atrophin 1, mRNA (cDNA clone MGC:632... 40 9.1
39gb|AY505119.1| Homo sapiens kazrin isoform A mRNA, complete cds 40 9.1
40ref|XM_882735.1| PREDICTED: Bos taurus hypothetical protein LOC6... 40 9.1
41gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 9.1
42ref|NM_007881.4| Mus musculus atrophin 1 (Atn1), mRNA 40 9.1
43gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.1
44ref|XM_977723.1| PREDICTED: Mus musculus hypothetical protein LO... 40 9.1
45ref|XM_989737.1| PREDICTED: Mus musculus hypothetical protein LO... 40 9.1
46ref|XM_001003232.1| PREDICTED: Mus musculus hypothetical protein... 40 9.1
47ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomat... 40 9.1
48ref|XM_533529.2| PREDICTED: Canis familiaris similar to SMC5 pro... 40 9.1
49ref|XM_844186.1| PREDICTED: Canis familiaris similar to Growth-a... 40 9.1
50ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA 40 9.1
51gb|AY737718.1| Escherichia blattae dihydroxyacetone kinase (dhaK... 40 9.1
52emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18... 40 9.1
53gb|AY039937.1| Arabidopsis thaliana At3g13490 mRNA sequence 40 9.1
54emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 9.1
55emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 9.1
56gb|DQ372923.1| Bacteriophage mu1/6, complete genome 40 9.1
57emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 9.1
58emb|AJ719759.1| Gallus gallus mRNA for hypothetical protein, clo... 40 9.1
59emb|AJ239004.1|SPN239004 Streptococcus pneumoniae type 8 capsula... 40 9.1
60gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 9.1
61gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromo... 40 9.1
62gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.1
63dbj|AB028949.1| Homo sapiens mRNA for KIAA1026 protein, partial cds 40 9.1
64gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 9.1
65gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, ... 40 9.1
66gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genom... 40 9.1
67gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 9.1
68gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 9.1
69gb|AF298154.1|AF298154 Arcanobacterium pyogenes BirA (birA) gene... 40 9.1
70gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 9.1
71dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
72gb|AF316641.1|AF316641 Streptococcus pneumoniae serotype 8 capsu... 40 9.1
73emb|BX830965.1|CNS09ZII Arabidopsis thaliana Full-length cDNA Co... 40 9.1
74gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complet... 40 9.1
75gb|AF271693.1|AF271693 Mycobacteriophage Bxb1, complete sequence 40 9.1
76dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.1
77gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.1
78gb|BT002317.1| Arabidopsis thaliana clone C105095 putative lysyl... 40 9.1
79dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 9.1
80dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 9.1
81dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 9.1
82dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.1
83ref|NM_210247.1| Eremothecium gossypii AER033Wp (AER033W), mRNA 40 9.1
84gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence 40 9.1
85gb|BC036877.1| Homo sapiens cDNA clone IMAGE:5242289, partial cds 40 9.1
86emb|CR931644.1| Streptococcus pneumoniae strain 573/62 (serotype 8) 40 9.1
87gb|AY781175.1| Oryza sativa (indica cultivar-group) gibberellic ... 40 9.1
88emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 9.1
89gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 9.1
90gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research G... 40 9.1
91gb|AY500153.1| Mycobacteriophage Bethlehem, complete genome 40 9.1
92gb|AY500152.1| Mycobacteriophage U2, complete genome 40 9.1
93dbj|AB030956.1| Oryza sativa (japonica cultivar-group) mRNA for ... 40 9.1 
>gb|AY323206.1| Hordeum vulgare SUSIBA2 (susiba2) mRNA, complete cds
          Length = 2354

 Score =  196 bits (99), Expect = 7e-47
 Identities = 132/139 (94%), Gaps = 3/139 (2%)
 Strand = Plus / Plus

                                                                       
Query: 85  agatcatgcatcgttgagccgcttggtgggcgagacggcctcgatggcctccccgagcgg 144
           ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 1   agatcatgcatcgttgagccgcttggtgggcgagacggc-tcgatgggctccccgagcgg 59

                                                                       
Query: 145 ccacgcggcctcgatgaagtactccccgtgcttcaccttctgcgccacggtgatctcctt 204
            ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 60  gcacgcgggctcgatgaagtactccccgtgcttca-cttctgcgccacggtgatctcctt 118

                              
Query: 205 -ggtcggctccaagccgaa 222
            |||||| |||||||||||
Sbjct: 119 gggtcgggtccaagccgaa 137
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>emb|AJ250665.1|HVU250665 Hordeum vulgare partial mRNA for putative DCINA-induced protein,
          clone BCI-9
          Length = 281

 Score =  121 bits (61), Expect = 3e-24
 Identities = 61/61 (100%)
 Strand = Plus / Minus

                                                                      
Query: 17 ttggagatgcccttactgcgcgagctagggccggattagcaatcatatcaaccaatactg 76
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttggagatgcccttactgcgcgagctagggccggattagcaatcatatcaaccaatactg 2

           
Query: 77 t 77
          |
Sbjct: 1  t 1
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>gb|AC123519.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017B18,
              complete sequence
          Length = 150279

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                          
Query: 419    atgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccgttc 478
              ||||||||||||||||| |||||||||| |||| |||| ||   ||||||||||||||||
Sbjct: 102757 atgtagtagaagctggatgtgacgtagatctcgtcctgcccaacgccgccgccgccgttc 102698

                                  
Query: 479    cacgcgccgttgaaggtgca 498
              ||| ||||||||||| ||||
Sbjct: 102697 cacacgccgttgaagctgca 102678



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                          
Query: 416    gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
              |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 122959 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 122900

                                             
Query: 476    ttccacgcgccgttgaaggtgcagttcttgg 506
              |||||| | ||||||||| ||||||| ||||
Sbjct: 122899 ttccacactccgttgaagctgcagttgttgg 122869



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                   
Query: 572    ccttgcggtgctgctatggcgtcgtattgctccccgttgtaggtgtatttgcc 624
              ||||| |||||||| || || ||||| |||||||||||||||||| |||||||
Sbjct: 102604 ccttgtggtgctgccattgcttcgtactgctccccgttgtaggtgaatttgcc 102552



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                         
Query: 143    ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 185
              |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 123493 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 123451



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                        
Query: 464   ccgccgccgccgttccacgcgccgttgaaggtgcagttcttgg 506
             ||||| || ||||||||  ||||||||||| ||||||||||||
Sbjct: 75081 ccgccaccaccgttccagacgccgttgaagctgcagttcttgg 75039
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 419     atgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccgttc 478
               ||||||||||||||||| |||||||||| |||| |||| ||   ||||||||||||||||
Sbjct: 1206951 atgtagtagaagctggatgtgacgtagatctcgtcctgcccaacgccgccgccgccgttc 1206892

                                   
Query: 479     cacgcgccgttgaaggtgca 498
               ||| ||||||||||| ||||
Sbjct: 1206891 cacacgccgttgaagctgca 1206872



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
                |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 13850864 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 13850923

                   
Query: 500      ttc 502
                |||
Sbjct: 13850924 ttc 13850926



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
                |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 13814382 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 13814441

                   
Query: 500      ttc 502
                |||
Sbjct: 13814442 ttc 13814444



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                           
Query: 416     gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
               |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 1227153 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 1227094

                                              
Query: 476     ttccacgcgccgttgaaggtgcagttcttgg 506
               |||||| | ||||||||| ||||||| ||||
Sbjct: 1227093 ttccacactccgttgaagctgcagttgttgg 1227063



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 572     ccttgcggtgctgctatggcgtcgtattgctccccgttgtaggtgtatttgcc 624
               ||||| |||||||| || || ||||| |||||||||||||||||| |||||||
Sbjct: 1206798 ccttgtggtgctgccattgcttcgtactgctccccgttgtaggtgaatttgcc 1206746



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 143     ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 185
               |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 1227687 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 1227645



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 464     ccgccgccgccgttccacgcgccgttgaaggtgcagttcttgg 506
               ||||| || ||||||||  ||||||||||| ||||||||||||
Sbjct: 1179275 ccgccaccaccgttccagacgccgttgaagctgcagttcttgg 1179233
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 71/80 (88%)
 Strand = Plus / Minus

                                                                           
Query: 419     atgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccgttc 478
               ||||||||||||||||| |||||||||| |||| |||| ||   ||||||||||||||||
Sbjct: 1204672 atgtagtagaagctggatgtgacgtagatctcgtcctgcccaacgccgccgccgccgttc 1204613

                                   
Query: 479     cacgcgccgttgaaggtgca 498
               ||| ||||||||||| ||||
Sbjct: 1204612 cacacgccgttgaagctgca 1204593



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
                |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 13932866 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 13932925

                   
Query: 500      ttc 502
                |||
Sbjct: 13932926 ttc 13932928



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 440      acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
                |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 13896384 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 13896443

                   
Query: 500      ttc 502
                |||
Sbjct: 13896444 ttc 13896446



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                           
Query: 416     gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
               |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 1224874 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 1224815

                                              
Query: 476     ttccacgcgccgttgaaggtgcagttcttgg 506
               |||||| | ||||||||| ||||||| ||||
Sbjct: 1224814 ttccacactccgttgaagctgcagttgttgg 1224784



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 572     ccttgcggtgctgctatggcgtcgtattgctccccgttgtaggtgtatttgcc 624
               ||||| |||||||| || || ||||| |||||||||||||||||| |||||||
Sbjct: 1204519 ccttgtggtgctgccattgcttcgtactgctccccgttgtaggtgaatttgcc 1204467



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 143     ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 185
               |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 1225408 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 1225366



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                          
Query: 464     ccgccgccgccgttccacgcgccgttgaaggtgcagttcttgg 506
               ||||| || ||||||||  ||||||||||| ||||||||||||
Sbjct: 1176996 ccgccaccaccgttccagacgccgttgaagctgcagttcttgg 1176954
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>gb|AC145812.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0096A19 map near 50283S, complete sequence
          Length = 139969

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 440   acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
             |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 88423 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 88482

                
Query: 500   ttc 502
             |||
Sbjct: 88483 ttc 88485



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 440   acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
             |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 51941 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 52000

                
Query: 500   ttc 502
             |||
Sbjct: 52001 ttc 52003
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>dbj|AK119786.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F08, full
            insert sequence
          Length = 1689

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 440  acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
            |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 1189 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 1130

               
Query: 500  ttc 502
            |||
Sbjct: 1129 ttc 1127
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>dbj|AK104429.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C10, full
            insert sequence
          Length = 1686

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 440  acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
            |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 1186 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 1127

               
Query: 500  ttc 502
            |||
Sbjct: 1126 ttc 1124
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>dbj|AK104082.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C02, full
            insert sequence
          Length = 1686

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 440  acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
            |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 1186 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 1127

               
Query: 500  ttc 502
            |||
Sbjct: 1126 ttc 1124
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>dbj|AK069955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G10, full
            insert sequence
          Length = 1691

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                        
Query: 440  acgtagagctcggcctggccggggccgccgccgccgttccacgcgccgttgaaggtgcag 499
            |||||||| ||||||  ||||| ||||||||||||||||||| ||||||||||| |||||
Sbjct: 1191 acgtagaggtcggccatgccggcgccgccgccgccgttccacacgccgttgaagctgcag 1132

               
Query: 500  ttc 502
            |||
Sbjct: 1131 ttc 1129
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                           
Query: 416     gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
               |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 1132348 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 1132289

                                              
Query: 476     ttccacgcgccgttgaaggtgcagttcttgg 506
               |||||| | ||||||||| ||||||| ||||
Sbjct: 1132288 ttccacactccgttgaagctgcagttgttgg 1132258
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>dbj|AK100760.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119H05, full
           insert sequence
          Length = 1834

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 416 gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
           |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 882 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 823

                                          
Query: 476 ttccacgcgccgttgaaggtgcagttcttgg 506
           |||||| | ||||||||| ||||||| ||||
Sbjct: 822 ttccacactccgttgaagctgcagttgttgg 792
to top
>dbj|AK059453.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-B11, full
           insert sequence
          Length = 735

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                       
Query: 416 gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
           |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 321 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 262

                                          
Query: 476 ttccacgcgccgttgaaggtgcagttcttgg 506
           |||||| | ||||||||| ||||||| ||||
Sbjct: 261 ttccacactccgttgaagctgcagttgttgg 231



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 143 ggccacgcggcctcgatgaagtactccccgtgcttcaccttct 185
           |||||||| || |||||| ||||||| || |||||||||||||
Sbjct: 588 ggccacgccgcttcgatgtagtactctccatgcttcaccttct 546
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                           
Query: 416     gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
               |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 1132348 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 1132289

                                              
Query: 476     ttccacgcgccgttgaaggtgcagttcttgg 506
               |||||| | ||||||||| ||||||| ||||
Sbjct: 1132288 ttccacactccgttgaagctgcagttgttgg 1132258
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>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 126974

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 77/91 (84%)
 Strand = Plus / Minus

                                                                         
Query: 416   gccatgtagtagaagctggaggtgacgtagagctcggcctggccggggccgccgccgccg 475
             |||||||||||||| ||||  |  |||||||||||| |||| || | ||| |||||||||
Sbjct: 71331 gccatgtagtagaaactggtcgcaacgtagagctcgtcctgcccagcgccaccgccgccg 71272

                                            
Query: 476   ttccacgcgccgttgaaggtgcagttcttgg 506
             |||||| | ||||||||| ||||||| ||||
Sbjct: 71271 ttccacactccgttgaagctgcagttgttgg 71241
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>gb|BT018406.1| Zea mays clone EL01N0326A05.d mRNA sequence
          Length = 1460

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 605 ccgttgtaggtgtatttgccatcgtatccgcgcagcacgcagtagctgactggtccgttt 664
           ||||||||||| ||||| |||    |||||||||||| |||| |||||| ||||||||| 
Sbjct: 677 ccgttgtaggtatatttaccactaaatccgcgcagcatgcaggagctgaatggtccgttc 618

               
Query: 665 ttgg 668
           ||||
Sbjct: 617 ttgg 614
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 169     cccgtgcttcaccttctgcgccacggt 195
               ||||| |||||||||||||||||||||
Sbjct: 1813551 cccgtccttcaccttctgcgccacggt 1813577
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>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome
          Length = 5751492

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 221     aacccgtccacgagcagggagta 243
               |||||||||||||||||||||||
Sbjct: 2443436 aacccgtccacgagcagggagta 2443458
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>emb|AL354815.10| Human DNA sequence from clone RP11-760M1 on chromosome 13 Contains
             three novel genes, the 5' end of the TNFRSF19 gene for
             tumour necrosis factor receptor superfamily member 19 and
             two CpG islands, complete sequence
          Length = 168663

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 305   gccttggcctccaggaagctca 326
             ||||||||||||||||||||||
Sbjct: 53221 gccttggcctccaggaagctca 53200
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>gb|AC109815.5| Homo sapiens BAC clone CTD-2192H8 from 2, complete sequence
          Length = 165158

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 450   cggcctggccggggccgccgccgccg 475
             ||||| ||||||||||||||||||||
Sbjct: 75678 cggccgggccggggccgccgccgccg 75703
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>gb|AC123886.7| Homo sapiens BAC clone RP11-404O21 from 2, complete sequence
          Length = 162447

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 450   cggcctggccggggccgccgccgccg 475
             ||||| ||||||||||||||||||||
Sbjct: 42199 cggccgggccggggccgccgccgccg 42224



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 42333 ggccggggccgccgccgccg 42352



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 42269 ggccggggccgccgccgccg 42288



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 42162 ggccggggccgccgccgccg 42181



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 42097 ggccggggccgccgccgccg 42116
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>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete
             sequence
          Length = 161653

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 456   ggccggggccgccgccgccgt 476
             |||||||||||||||||||||
Sbjct: 73254 ggccggggccgccgccgccgt 73274
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 453    cctggccggggccgccgccgc 473
              |||||||||||||||||||||
Sbjct: 780441 cctggccggggccgccgccgc 780421
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>gb|AC079852.3| Oryza sativa chromosome 10 clone OSJNBa0034A02, complete sequence
          Length = 185904

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 461   gggccgccgccgccgttccac 481
             |||||||||||||||||||||
Sbjct: 79572 gggccgccgccgccgttccac 79592
to top
>gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosphate dehydrogenase homolog
            (gapdh) gene, complete cds; and phosphoglycerate kinase
            gene, partial cds
          Length = 2530

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 339  cctcggcggcggccctgaacgccgc 363
            |||||||||||||| ||||||||||
Sbjct: 1158 cctcggcggcggccttgaacgccgc 1134
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 461     gggccgccgccgccgttccac 481
               |||||||||||||||||||||
Sbjct: 2576692 gggccgccgccgccgttccac 2576712
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 335     atctcctcggcggcggccctg 355
               |||||||||||||||||||||
Sbjct: 5509779 atctcctcggcggcggccctg 5509759
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>gb|AY111776.1| Zea mays CL39796_1 mRNA sequence
          Length = 952

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 464 ccgccgccgccgttccacgcgccgttgaaggtgcagttctt 504
           ||||||||||| |||||   ||| |||||||||||||||||
Sbjct: 771 ccgccgccgccattccatatgccattgaaggtgcagttctt 811



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 242 tactggtagacaaggtccatgcagatgtagggc 274
           ||||||||| ||||||||||||| | |||||||
Sbjct: 549 tactggtaggcaaggtccatgcacaggtagggc 581
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 461     gggccgccgccgccgttccac 481
               |||||||||||||||||||||
Sbjct: 2576643 gggccgccgccgccgttccac 2576663
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>ref|NM_112195.2| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/
           lysine-tRNA ligase/ nucleic acid binding / tRNA ligase
           AT3G13490 mRNA, complete cds
          Length = 2091

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  ggattagcaatcatatcaac 68
           ||||||||||||||||||||
Sbjct: 760 ggattagcaatcatatcaac 741
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>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence
          Length = 200560

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    ggccggggccgccgccgccg 475
              ||||||||||||||||||||
Sbjct: 134869 ggccggggccgccgccgccg 134888
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>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence
          Length = 176868

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    ggccggggccgccgccgccg 475
              ||||||||||||||||||||
Sbjct: 152309 ggccggggccgccgccgccg 152290
to top
>gb|DQ215467.1| Taeniopygia guttata clone 0058P0010H07 MGC15397 variant 1-like
           mRNA, complete sequence
          Length = 1115

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 93  ggccggggccgccgccgccg 74
to top
>ref|NM_001030604.1| Gallus gallus SLIT-ROBO Rho GTPase activating protein 3 (SRGAP3),
            mRNA
          Length = 2858

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccgctgctcgcctcgctgtc 396
            ||||||||||||||||||||
Sbjct: 2585 ccgctgctcgcctcgctgtc 2566
to top
>ref|XM_469478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2109

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  agagctcggcctggccggggccgccgcc 471
            |||||||||||||||||| || ||||||
Sbjct: 1780 agagctcggcctggccggagctgccgcc 1753
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>ref|NM_015209.1| Homo sapiens kazrin (KIAA1026), transcript variant A, mRNA
          Length = 1475

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 351 ggccggggccgccgccgccg 332
to top
>ref|XM_513047.1| PREDICTED: Pan troglodytes similar to KIAA1026 protein (LOC456454),
            mRNA
          Length = 2790

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 456  ggccggggccgccgccgccg 475
            ||||||||||||||||||||
Sbjct: 1096 ggccggggccgccgccgccg 1077
to top
>gb|BC050920.1| Mus musculus atrophin 1, mRNA (cDNA clone MGC:63230 IMAGE:6406687),
           complete cds
          Length = 4421

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 51  ggccggggccgccgccgccg 70
to top
>gb|AY505119.1| Homo sapiens kazrin isoform A mRNA, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 351 ggccggggccgccgccgccg 332
to top
>ref|XM_882735.1| PREDICTED: Bos taurus hypothetical protein LOC617310 (LOC617310),
           mRNA
          Length = 641

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 226 ggccggggccgccgccgccg 245
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 511     gcatggcgcgctgattctca 530
               ||||||||||||||||||||
Sbjct: 4975133 gcatggcgcgctgattctca 4975152
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>ref|NM_007881.4| Mus musculus atrophin 1 (Atn1), mRNA
          Length = 4426

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 51  ggccggggccgccgccgccg 70
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 444      agagctcggcctggccggggccgccgcc 471
                |||||||||||||||||| || ||||||
Sbjct: 28219490 agagctcggcctggccggagctgccgcc 28219463
to top
>ref|XM_977723.1| PREDICTED: Mus musculus hypothetical protein LOC669002 (LOC669002),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 266 ggccggggccgccgccgccg 247
to top
>ref|XM_989737.1| PREDICTED: Mus musculus hypothetical protein LOC667319 (LOC667319),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 266 ggccggggccgccgccgccg 247
to top
>ref|XM_001003232.1| PREDICTED: Mus musculus hypothetical protein LOC677407 (LOC677407),
           mRNA
          Length = 915

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 266 ggccggggccgccgccgccg 247
to top
>ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomatosis polyposis coli 2
            (LOC485084), mRNA
          Length = 7620

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 456  ggccggggccgccgccgccg 475
            ||||||||||||||||||||
Sbjct: 4753 ggccggggccgccgccgccg 4734
to top
>ref|XM_533529.2| PREDICTED: Canis familiaris similar to SMC5 protein, transcript
           variant 1 (LOC476327), mRNA
          Length = 3354

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 444 agagctcggcctggccggggccgccgccgccg 475
           |||||||||||  ||||| |||||||||||||
Sbjct: 98  agagctcggccccgccggcgccgccgccgccg 129
to top
>ref|XM_844186.1| PREDICTED: Canis familiaris similar to Growth-arrest-specific
           protein 1 precursor (GAS-1) (LOC607496), mRNA
          Length = 1032

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 258 ggccggggccgccgccgccg 277
to top
>ref|NM_017228.1| Rattus norvegicus atrophin 1 (Atn1), mRNA
          Length = 4387

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 42  ggccggggccgccgccgccg 61
to top
>gb|AY737718.1| Escherichia blattae dihydroxyacetone kinase (dhaK), putative
             phosphoenolpyruvate-protein kinase (PTS system) (dhaN),
             putative dihydroxyacetone kinase (dhaM), hypothetical
             protein ycgT (dhaL), glycerol dehydrogenase (dhaD),
             glycerol metabolism operon regulatory protein (dhaR),
             putative adenosyl transferase subunit (dhaH), putative
             glycerol dehydratase reactivation factor small subunit
             (dhaG), 1,3-propanediol dehydrogenase (dhaT), putative
             adenosyl transferase subunit (dhaI), glycerol dehydratase
             large subunit (dhaB), glycerol dehydratase 21 kDa subunit,
             transcriptional regulator, Ner-like DNA-binding protein,
             transposase, DNA transposition protein, Cim protein, host
             nuclease inhibitor protein, hypothetical proteins, middle
             operon regulator, hypothetical proteins, Portal protein,
             hypothetical protein, F protein, I protein, major head
             subunit, hypothetical proteins, virion morphogenesis
             protein, hypothetical proteins, tail sheath protein, Tail
             tube protein, hypothetical proteins, DNA circulation
             protein, tail protein, baseplate assembly protein,
             hypothetical proteins, tail fiber protein, tail fiber
             assembly protein, hypothetical protein, glycerol
             dehydratase beta subunit, glycerol dehydratase small
             subunit (dhaE), and glycerol dehydratase reactivase chain
             A (dhaF) genes, complete cds
          Length = 49478

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 127   gatggcctccccgagcggccacgcggcc 154
             ||||||||||| ||||||||||| ||||
Sbjct: 48611 gatggcctccctgagcggccacggggcc 48638
to top
>emb|AL034395.6|HS243L18 Human DNA sequence from clone RP1-243L18 on chromosome 1p36.11-36.23
             Contains the 5' end of a novel gene (KIAA1026) and a CpG
             island, complete sequence
          Length = 110654

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 91770 ggccggggccgccgccgccg 91789
to top
>gb|AY039937.1| Arabidopsis thaliana At3g13490 mRNA sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  ggattagcaatcatatcaac 68
           ||||||||||||||||||||
Sbjct: 760 ggattagcaatcatatcaac 741
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 591     cgtcgtattgctccccgttg 610
               ||||||||||||||||||||
Sbjct: 4221140 cgtcgtattgctccccgttg 4221121
to top
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   gccctgaacgccgccggcgt 369
             ||||||||||||||||||||
Sbjct: 41411 gccctgaacgccgccggcgt 41392
to top
>gb|DQ372923.1| Bacteriophage mu1/6, complete genome
          Length = 38194

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 139   gagcggccacgcggcctcga 158
             ||||||||||||||||||||
Sbjct: 10731 gagcggccacgcggcctcga 10712
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    gccggggccgccgccgccgt 476
              ||||||||||||||||||||
Sbjct: 253103 gccggggccgccgccgccgt 253122
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>emb|AJ719759.1| Gallus gallus mRNA for hypothetical protein, clone 6c21
          Length = 2858

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 377  ccgctgctcgcctcgctgtc 396
            ||||||||||||||||||||
Sbjct: 2585 ccgctgctcgcctcgctgtc 2566
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>emb|AJ239004.1|SPN239004 Streptococcus pneumoniae type 8 capsular gene cluster
          Length = 14730

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   ggattagcaatcatatcaac 68
            ||||||||||||||||||||
Sbjct: 8942 ggattagcaatcatatcaac 8961
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 442   gtagagctcggcctggccgg 461
             ||||||||||||||||||||
Sbjct: 75359 gtagagctcggcctggccgg 75378
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>gb|AC183275.3| Pan troglodytes BAC clone CH251-16D10 from chromosome 2, complete
             sequence
          Length = 180877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 456   ggccggggccgccgccgccg 475
             ||||||||||||||||||||
Sbjct: 94136 ggccggggccgccgccgccg 94155
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 446    agctcggcctggccggggccgccg 469
              |||| |||||||||||||||||||
Sbjct: 389493 agcttggcctggccggggccgccg 389516
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>dbj|AB028949.1| Homo sapiens mRNA for KIAA1026 protein, partial cds
          Length = 5592

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 436 ggccggggccgccgccgccg 417
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     gccggggccgccgccgccgt 476
               ||||||||||||||||||||
Sbjct: 3333787 gccggggccgccgccgccgt 3333768
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>gb|U31777.1|RNU31777 Rattus norvegicus atrophin-1 (DRPLA) mRNA, complete cds
          Length = 4387

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 42  ggccggggccgccgccgccg 61
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>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete
             sequence
          Length = 122497

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 444   agagctcggcctggccggggccgccgcc 471
             |||||||||||||||||| || ||||||
Sbjct: 70631 agagctcggcctggccggagctgccgcc 70604
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 457     gccggggccgccgccgccgt 476
               ||||||||||||||||||||
Sbjct: 3511381 gccggggccgccgccgccgt 3511400
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V,
              complete sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 448    ctcggcctggccggggccgccgccgccg 475
              |||||||||||||| | |||||||||||
Sbjct: 698771 ctcggcctggccggtgacgccgccgccg 698744
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>gb|AF298154.1|AF298154 Arcanobacterium pyogenes BirA (birA) gene, partial cds; and
            neuraminidase NanH (nanH) gene, complete cds
          Length = 4802

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 468  cgccgccgttccacgcgccgttga 491
            ||||||||| ||||||||||||||
Sbjct: 2007 cgccgccgtgccacgcgccgttga 1984
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     gccggggccgccgccgccgt 476
               ||||||||||||||||||||
Sbjct: 2008974 gccggggccgccgccgccgt 2008955
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 444      agagctcggcctggccggggccgccgcc 471
                |||||||||||||||||| || ||||||
Sbjct: 28310814 agagctcggcctggccggagctgccgcc 28310787
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>gb|AF316641.1|AF316641 Streptococcus pneumoniae serotype 8 capsular polysaccharide gene
            cluster, complete sequence
          Length = 13746

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   ggattagcaatcatatcaac 68
            ||||||||||||||||||||
Sbjct: 8314 ggattagcaatcatatcaac 8333
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>emb|BX830965.1|CNS09ZII Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS42ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1334

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 165 actccccgtgcttcaccttc 184
           ||||||||||||||||||||
Sbjct: 707 actccccgtgcttcaccttc 726
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>gb|AC022210.8| Homo sapiens BAC clone RP11-617F9 from 2, complete sequence
          Length = 164846

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 448   ctcggcctggccggggccgccgccgccg 475
             |||||||||||||  |||||||||||||
Sbjct: 86080 ctcggcctggccgccgccgccgccgccg 86053
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>gb|AF271693.1|AF271693 Mycobacteriophage Bxb1, complete sequence
          Length = 50550

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 326   atcgggcagatctcctcggcggcggccc 353
             |||| |||||||||||||||||| ||||
Sbjct: 24775 atcgagcagatctcctcggcggctgccc 24802
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     cgtggtcttcccgctgctcg 386
               ||||||||||||||||||||
Sbjct: 2260783 cgtggtcttcccgctgctcg 2260764
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 452     gcctggccggggccgccgccgccg 475
               ||||||||| ||||||||||||||
Sbjct: 1449233 gcctggccgaggccgccgccgccg 1449210
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>gb|BT002317.1| Arabidopsis thaliana clone C105095 putative lysyl-tRNA synthetase
           (At3g13490) mRNA, complete cds
          Length = 1840

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 49  ggattagcaatcatatcaac 68
           ||||||||||||||||||||
Sbjct: 737 ggattagcaatcatatcaac 718
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 390     cgctgtcgatcaggccgacg 409
               ||||||||||||||||||||
Sbjct: 3237155 cgctgtcgatcaggccgacg 3237174
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    cctggccggggccgccgccg 472
              ||||||||||||||||||||
Sbjct: 774421 cctggccggggccgccgccg 774402
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 591     cgtcgtattgctccccgttg 610
               ||||||||||||||||||||
Sbjct: 4315204 cgtcgtattgctccccgttg 4315185
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>dbj|AP000603.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MRP15
          Length = 83287

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ggattagcaatcatatcaac 68
             ||||||||||||||||||||
Sbjct: 52091 ggattagcaatcatatcaac 52110
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>ref|NM_210247.1| Eremothecium gossypii AER033Wp (AER033W), mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 448 ctcggcctggccggggccgccgccgccg 475
           |||||||||||||| | |||||||||||
Sbjct: 678 ctcggcctggccggtgacgccgccgccg 651
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>gb|BT023990.1| Zea mays clone EL01N0412C01 mRNA sequence
          Length = 1802

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 456 ggccggggccgccgccgccg 475
           ||||||||||||||||||||
Sbjct: 43  ggccggggccgccgccgccg 24
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>gb|BC036877.1| Homo sapiens cDNA clone IMAGE:5242289, partial cds
          Length = 2697

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 456  ggccggggccgccgccgccg 475
            ||||||||||||||||||||
Sbjct: 2275 ggccggggccgccgccgccg 2294
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>emb|CR931644.1| Streptococcus pneumoniae strain 573/62 (serotype 8)
          Length = 13844

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   ggattagcaatcatatcaac 68
            ||||||||||||||||||||
Sbjct: 8321 ggattagcaatcatatcaac 8340
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>gb|AY781175.1| Oryza sativa (indica cultivar-group) gibberellic acid-insensitive
            (GAI) gene, promoter region and complete cds
          Length = 3494

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  agagctcggcctggccggggccgccgcc 471
            |||||||||||||||||| || ||||||
Sbjct: 3052 agagctcggcctggccggagctgccgcc 3025
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 130    ggcctccccgagcggccacgcggcctcgatga 161
              |||||| ||||||  |||||||||||||||||
Sbjct: 585478 ggcctcgccgagcccccacgcggcctcgatga 585509
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 457    gccggggccgccgccgccgt 476
              ||||||||||||||||||||
Sbjct: 223581 gccggggccgccgccgccgt 223562
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>gb|AC002397.1|AC002397 Mouse chromosome 6 BAC-284H12 (Research Genetics mouse BAC library)
              complete sequence
          Length = 227538

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 456    ggccggggccgccgccgccg 475
              ||||||||||||||||||||
Sbjct: 141373 ggccggggccgccgccgccg 141392
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>gb|AY500153.1| Mycobacteriophage Bethlehem, complete genome
          Length = 52250

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 326   atcgggcagatctcctcggcggcggccc 353
             |||| |||||||||||||||||| ||||
Sbjct: 25967 atcgagcagatctcctcggcggctgccc 25994
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>gb|AY500152.1| Mycobacteriophage U2, complete genome
          Length = 51277

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 326   atcgggcagatctcctcggcggcggccc 353
             |||| |||||||||||||||||| ||||
Sbjct: 24829 atcgagcagatctcctcggcggctgccc 24856
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>dbj|AB030956.1| Oryza sativa (japonica cultivar-group) mRNA for OsGAI, complete cds
          Length = 2500

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 444  agagctcggcctggccggggccgccgcc 471
            |||||||||||||||||| || ||||||
Sbjct: 1764 agagctcggcctggccggagctgccgcc 1737


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,597,842
Number of Sequences: 3902068
Number of extensions: 4597842
Number of successful extensions: 115325
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111509
Number of HSP's gapped (non-prelim): 3812
length of query: 668
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 645
effective length of database: 17,143,297,704
effective search space: 11057427019080
effective search space used: 11057427019080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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