ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18j19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VATA_HORVU (Q40002) Vacuolar ATP synthase catalytic subunit A (E... 46 2e-05
2VATA_DAUCA (P09469) Vacuolar ATP synthase catalytic subunit A (E... 39 0.004
3VATA_BRANA (Q39291) Vacuolar ATP synthase catalytic subunit A (E... 39 0.004
4VATA_MAIZE (P49087) Vacuolar ATP synthase catalytic subunit A (E... 39 0.004
5VATA_BETVU (Q39442) Vacuolar ATP synthase catalytic subunit A (E... 36 0.019
6VATA_CITUN (Q9SM09) Vacuolar ATP synthase catalytic subunit A (E... 35 0.057
7VATA_ARATH (O23654) Vacuolar ATP synthase catalytic subunit A (E... 35 0.057
8VATA_GOSHI (P31405) Vacuolar ATP synthase catalytic subunit A (E... 34 0.096
9VATA_PHAAU (P13548) Vacuolar ATP synthase catalytic subunit A (E... 33 0.16
10ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isofor... 32 0.28
11ACET_RABIT (P22968) Angiotensin-converting enzyme, testis-specif... 32 0.28
12R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like prot... 30 1.1
13ACE_HUMAN (P12821) Angiotensin-converting enzyme, somatic isofor... 30 1.8
14ACET_PANTR (Q9GLN6) Angiotensin-converting enzyme, testis-specif... 30 1.8
15ACET_HUMAN (P22966) Angiotensin-converting enzyme, testis-specif... 30 1.8
16ACE_PANTR (Q9GLN7) Angiotensin-converting enzyme, somatic isofor... 30 1.8
17IL20_HUMAN (Q9NYY1) Interleukin-20 precursor (IL-20) (Four alpha... 29 2.4
18GRC3_CANGA (Q6FW56) Protein GRC3 28 4.1
19YJE9_YEAST (P47048) Hypothetical 52.8 kDa protein in MTR4-GYP6 i... 28 5.3
20COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibr... 28 6.9
21EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4... 27 9.0
22OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2 27 9.0

>VATA_HORVU (Q40002) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (Fragment)
          Length = 580

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 23/26 (88%), Positives = 23/26 (88%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           DVLVAKFQKLY  LTAGFRNLE EAR
Sbjct: 555 DVLVAKFQKLYDDLTAGFRNLEDEAR 580



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>VATA_DAUCA (P09469) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           DVLV KF+KL+  LT+GFRNLE E R
Sbjct: 598 DVLVGKFKKLHDDLTSGFRNLEDETR 623



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>VATA_BRANA (Q39291) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (Tonoplast ATPase 70
           kDa subunit) (BN59)
          Length = 623

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           DVLV KF+KL+  LT+GFRNLE E R
Sbjct: 598 DVLVGKFKKLHDDLTSGFRNLEDETR 623



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>VATA_MAIZE (P49087) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (Fragment)
          Length = 561

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 18/26 (69%), Positives = 20/26 (76%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           + LV KF+KLY  LT GFRNLE EAR
Sbjct: 536 EALVGKFKKLYDDLTTGFRNLEDEAR 561



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>VATA_BETVU (Q39442) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           D LVAKF+KL   LTA FRNLE E R
Sbjct: 598 DALVAKFKKLNEDLTAAFRNLEDETR 623



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>VATA_CITUN (Q9SM09) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = -3

Query: 386 LVAKFQKLYVXLTAGFRNLEXEAR 315
           LVAKF+KL+  LTAGFR LE E R
Sbjct: 600 LVAKFKKLHEDLTAGFRALEDETR 623



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>VATA_ARATH (O23654) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 34.7 bits (78), Expect = 0.057
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           D LV KF+KLY  L AGFR LE E R
Sbjct: 598 DTLVEKFKKLYDDLNAGFRALEDETR 623



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>VATA_GOSHI (P31405) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit)
          Length = 623

 Score = 33.9 bits (76), Expect = 0.096
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -3

Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315
           + LVAKF+KL   LTAGFR LE E R
Sbjct: 598 EALVAKFKKLNEDLTAGFRALEDETR 623



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>VATA_PHAAU (P13548) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)|
           (V-ATPase subunit A) (Vacuolar proton pump alpha
           subunit) (V-ATPase 69 kDa subunit) (VAA3-1)
          Length = 622

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = -3

Query: 386 LVAKFQKLYVXLTAGFRNLEXEAR 315
           LV +FQKL+  L+ GFRNLE E R
Sbjct: 599 LVGQFQKLHEDLSTGFRNLEDETR 622



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>ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isoform precursor (EC|
            3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
            [Contains: Angiotensin-converting enzyme, somatic
            isoform, soluble form]
          Length = 1310

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 52   PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
            P+ + L T NG HGEK     + W PN+ +S
Sbjct: 1207 PLMDWLLTENGRHGEKLGWPQYTWTPNSARS 1237



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>ACET_RABIT (P22968) Angiotensin-converting enzyme, testis-specific isoform|
           precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl
           carboxypeptidase I) (Kininase II) [Contains:
           Angiotensin-converting enzyme, testis-specific isoform,
           soluble form]
          Length = 737

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 52  PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
           P+ + L T NG HGEK     + W PN+ +S
Sbjct: 634 PLMDWLLTENGRHGEKLGWPQYTWTPNSARS 664



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>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2|
          Length = 847

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -3

Query: 179 FFCDRQTALFFQDFTLFGLQRQDASHYFSPCVPLFVVRRLNTGG 48
           + CDR+     + F  FG +R D ++  +  + L ++R LN GG
Sbjct: 524 YLCDRRVNTQMRSFLFFGKRRNDITYVETITLKLKLLRVLNLGG 567



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>ACE_HUMAN (P12821) Angiotensin-converting enzyme, somatic isoform precursor (EC|
            3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
            (CD143 antigen) [Contains: Angiotensin-converting enzyme,
            somatic isoform, soluble form]
          Length = 1306

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 52   PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
            P+ + L T N  HGEK     + W PN+ +S
Sbjct: 1203 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 1233



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>ACET_PANTR (Q9GLN6) Angiotensin-converting enzyme, testis-specific isoform|
           precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl
           carboxypeptidase I) (Kininase II) [Contains:
           Angiotensin-converting enzyme, testis-specific isoform,
           soluble form]
          Length = 732

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
           P+ + L T N  HGEK     + W PN+ +S
Sbjct: 629 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 659



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>ACET_HUMAN (P22966) Angiotensin-converting enzyme, testis-specific isoform|
           precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl
           carboxypeptidase I) (Kininase II) [Contains:
           Angiotensin-converting enzyme, testis-specific isoform,
           soluble form]
          Length = 732

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 52  PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
           P+ + L T N  HGEK     + W PN+ +S
Sbjct: 629 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 659



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>ACE_PANTR (Q9GLN7) Angiotensin-converting enzyme, somatic isoform precursor (EC|
            3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II)
            [Contains: Angiotensin-converting enzyme, somatic
            isoform, soluble form]
          Length = 1304

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 52   PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144
            P+ + L T N  HGEK     + W PN+ +S
Sbjct: 1201 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 1231



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>IL20_HUMAN (Q9NYY1) Interleukin-20 precursor (IL-20) (Four alpha helix|
           cytokine Zcyto10)
          Length = 176

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 159 SLVFSGFYIIWSPAPGCKPLFFPMCTI 79
           SL+ + FY++W+P+ G K L    C I
Sbjct: 9   SLLSAAFYLLWTPSTGLKTLNLGSCVI 35



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>GRC3_CANGA (Q6FW56) Protein GRC3|
          Length = 630

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 5   MXSXWTSCLFHYEHVHRCSIFLQQIMVHMGKNNG 106
           +   WT+CL   + +++ SI   +IMV  GKN+G
Sbjct: 219 ISKSWTNCLQKLKFINQNSIHDTRIMVIGGKNSG 252



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>YJE9_YEAST (P47048) Hypothetical 52.8 kDa protein in MTR4-GYP6 intergenic|
           region
          Length = 450

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
 Frame = +1

Query: 1   IDVXXMDIVLIPL*TCPPVFNL--LTTNNGTHGEK*WLASWRWRPNNVKS*KNKA-VCLS 171
           IDV   +  LIP+     +FNL  + T+N   G   W+ SW+   N  KS K++    L 
Sbjct: 77  IDVLVNEGNLIPM----ELFNLGGMYTDNSRKGFWKWVRSWKESTNMYKSRKDETNFYLR 132

Query: 172 QKKGILKRN 198
           + K I+K N
Sbjct: 133 EDKFIIKAN 141



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>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 192  FQDPLFLRQTDSLVFSGFYIIWSPAPG 112
            F+ P  LR +DS + S F + W PAPG
Sbjct: 1087 FKPPRNLRTSDSTM-SSFRVTWEPAPG 1112



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>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)|
           (Ath-ExpBeta-1.1)
          Length = 259

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
 Frame = -1

Query: 268 GAPNAVNDLRAICFCFTRVCVDANYVSGSPFFATDRQ-----PCFFRILHYLVSSARMQA 104
           G P+  N+ +    C+  VC+     SGSP   T        PC    +H  +S   M A
Sbjct: 72  GGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGA 131

Query: 103 IIFP 92
           +  P
Sbjct: 132 LAKP 135



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>OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2|
          Length = 317

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -2

Query: 111 CKPLFFP--MCTIICCKKIEHRWTC 43
           C+PL +P  M T +C K     WTC
Sbjct: 127 CRPLHYPIIMTTTLCAKMAAACWTC 151


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,844,236
Number of Sequences: 219361
Number of extensions: 985507
Number of successful extensions: 2030
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2030
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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