| Clone Name | rbags18j19 |
|---|---|
| Clone Library Name | barley_pub |
>VATA_HORVU (Q40002) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (Fragment) Length = 580 Score = 46.2 bits (108), Expect = 2e-05 Identities = 23/26 (88%), Positives = 23/26 (88%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 DVLVAKFQKLY LTAGFRNLE EAR Sbjct: 555 DVLVAKFQKLYDDLTAGFRNLEDEAR 580
>VATA_DAUCA (P09469) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 DVLV KF+KL+ LT+GFRNLE E R Sbjct: 598 DVLVGKFKKLHDDLTSGFRNLEDETR 623
>VATA_BRANA (Q39291) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (Tonoplast ATPase 70 kDa subunit) (BN59) Length = 623 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 DVLV KF+KL+ LT+GFRNLE E R Sbjct: 598 DVLVGKFKKLHDDLTSGFRNLEDETR 623
>VATA_MAIZE (P49087) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (Fragment) Length = 561 Score = 38.5 bits (88), Expect = 0.004 Identities = 18/26 (69%), Positives = 20/26 (76%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 + LV KF+KLY LT GFRNLE EAR Sbjct: 536 EALVGKFKKLYDDLTTGFRNLEDEAR 561
>VATA_BETVU (Q39442) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 36.2 bits (82), Expect = 0.019 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 D LVAKF+KL LTA FRNLE E R Sbjct: 598 DALVAKFKKLNEDLTAAFRNLEDETR 623
>VATA_CITUN (Q9SM09) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 34.7 bits (78), Expect = 0.057 Identities = 17/24 (70%), Positives = 19/24 (79%) Frame = -3 Query: 386 LVAKFQKLYVXLTAGFRNLEXEAR 315 LVAKF+KL+ LTAGFR LE E R Sbjct: 600 LVAKFKKLHEDLTAGFRALEDETR 623
>VATA_ARATH (O23654) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 34.7 bits (78), Expect = 0.057 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 D LV KF+KLY L AGFR LE E R Sbjct: 598 DTLVEKFKKLYDDLNAGFRALEDETR 623
>VATA_GOSHI (P31405) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) Length = 623 Score = 33.9 bits (76), Expect = 0.096 Identities = 17/26 (65%), Positives = 19/26 (73%) Frame = -3 Query: 392 DVLVAKFQKLYVXLTAGFRNLEXEAR 315 + LVAKF+KL LTAGFR LE E R Sbjct: 598 EALVAKFKKLNEDLTAGFRALEDETR 623
>VATA_PHAAU (P13548) Vacuolar ATP synthase catalytic subunit A (EC 3.6.3.14)| (V-ATPase subunit A) (Vacuolar proton pump alpha subunit) (V-ATPase 69 kDa subunit) (VAA3-1) Length = 622 Score = 33.1 bits (74), Expect = 0.16 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -3 Query: 386 LVAKFQKLYVXLTAGFRNLEXEAR 315 LV +FQKL+ L+ GFRNLE E R Sbjct: 599 LVGQFQKLHEDLSTGFRNLEDETR 622
>ACE_RABIT (P12822) Angiotensin-converting enzyme, somatic isoform precursor (EC| 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, somatic isoform, soluble form] Length = 1310 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T NG HGEK + W PN+ +S Sbjct: 1207 PLMDWLLTENGRHGEKLGWPQYTWTPNSARS 1237
>ACET_RABIT (P22968) Angiotensin-converting enzyme, testis-specific isoform| precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, testis-specific isoform, soluble form] Length = 737 Score = 32.3 bits (72), Expect = 0.28 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T NG HGEK + W PN+ +S Sbjct: 634 PLMDWLLTENGRHGEKLGWPQYTWTPNSARS 664
>R13L2_ARATH (Q9STE5) Putative disease resistance RPP13-like protein 2| Length = 847 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = -3 Query: 179 FFCDRQTALFFQDFTLFGLQRQDASHYFSPCVPLFVVRRLNTGG 48 + CDR+ + F FG +R D ++ + + L ++R LN GG Sbjct: 524 YLCDRRVNTQMRSFLFFGKRRNDITYVETITLKLKLLRVLNLGG 567
>ACE_HUMAN (P12821) Angiotensin-converting enzyme, somatic isoform precursor (EC| 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) (CD143 antigen) [Contains: Angiotensin-converting enzyme, somatic isoform, soluble form] Length = 1306 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T N HGEK + W PN+ +S Sbjct: 1203 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 1233
>ACET_PANTR (Q9GLN6) Angiotensin-converting enzyme, testis-specific isoform| precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, testis-specific isoform, soluble form] Length = 732 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T N HGEK + W PN+ +S Sbjct: 629 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 659
>ACET_HUMAN (P22966) Angiotensin-converting enzyme, testis-specific isoform| precursor (EC 3.4.15.1) (EC 3.2.1.-) (ACE-T) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, testis-specific isoform, soluble form] Length = 732 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T N HGEK + W PN+ +S Sbjct: 629 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 659
>ACE_PANTR (Q9GLN7) Angiotensin-converting enzyme, somatic isoform precursor (EC| 3.4.15.1) (Dipeptidyl carboxypeptidase I) (Kininase II) [Contains: Angiotensin-converting enzyme, somatic isoform, soluble form] Length = 1304 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +1 Query: 52 PVFNLLTTNNGTHGEK*WLASWRWRPNNVKS 144 P+ + L T N HGEK + W PN+ +S Sbjct: 1201 PLLDWLRTENELHGEKLGWPQYNWTPNSARS 1231
>IL20_HUMAN (Q9NYY1) Interleukin-20 precursor (IL-20) (Four alpha helix| cytokine Zcyto10) Length = 176 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -2 Query: 159 SLVFSGFYIIWSPAPGCKPLFFPMCTI 79 SL+ + FY++W+P+ G K L C I Sbjct: 9 SLLSAAFYLLWTPSTGLKTLNLGSCVI 35
>GRC3_CANGA (Q6FW56) Protein GRC3| Length = 630 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +2 Query: 5 MXSXWTSCLFHYEHVHRCSIFLQQIMVHMGKNNG 106 + WT+CL + +++ SI +IMV GKN+G Sbjct: 219 ISKSWTNCLQKLKFINQNSIHDTRIMVIGGKNSG 252
>YJE9_YEAST (P47048) Hypothetical 52.8 kDa protein in MTR4-GYP6 intergenic| region Length = 450 Score = 28.1 bits (61), Expect = 5.3 Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Frame = +1 Query: 1 IDVXXMDIVLIPL*TCPPVFNL--LTTNNGTHGEK*WLASWRWRPNNVKS*KNKA-VCLS 171 IDV + LIP+ +FNL + T+N G W+ SW+ N KS K++ L Sbjct: 77 IDVLVNEGNLIPM----ELFNLGGMYTDNSRKGFWKWVRSWKESTNMYKSRKDETNFYLR 132 Query: 172 QKKGILKRN 198 + K I+K N Sbjct: 133 EDKFIIKAN 141
>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)| Length = 3124 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = -2 Query: 192 FQDPLFLRQTDSLVFSGFYIIWSPAPG 112 F+ P LR +DS + S F + W PAPG Sbjct: 1087 FKPPRNLRTSDSTM-SSFRVTWEPAPG 1112
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 5/64 (7%) Frame = -1 Query: 268 GAPNAVNDLRAICFCFTRVCVDANYVSGSPFFATDRQ-----PCFFRILHYLVSSARMQA 104 G P+ N+ + C+ VC+ SGSP T PC +H +S M A Sbjct: 72 GGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGA 131 Query: 103 IIFP 92 + P Sbjct: 132 LAKP 135
>OR6N2_HUMAN (Q8NGY6) Olfactory receptor 6N2| Length = 317 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%) Frame = -2 Query: 111 CKPLFFP--MCTIICCKKIEHRWTC 43 C+PL +P M T +C K WTC Sbjct: 127 CRPLHYPIIMTTTLCAKMAAACWTC 151 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,844,236 Number of Sequences: 219361 Number of extensions: 985507 Number of successful extensions: 2030 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 2000 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2030 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)