ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18i22
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 60 6e-09
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 45 2e-04
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 39 0.015
4EPN3_HUMAN (Q9H201) Epsin-3 (EPS-15-interacting protein 3) 31 3.1
5GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX) ... 30 9.0

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 60.1 bits (144), Expect = 6e-09
 Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
 Frame = -3

Query: 572 PTRFGFSASSRLRVCCGAGGPYNYNLTAACGFPGAS---------ACANPATRINWDGIH 420
           P + GF     L  CCG GG YN+++TA CG    +         +CA P+ R+NWDG H
Sbjct: 293 PEKHGFEFP--LITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAH 350

Query: 419 MTETAYMYIAAGWLWGPYAQPPI 351
            TE A  Y       G ++ PP+
Sbjct: 351 YTEAANEYFFDQISTGAFSDPPV 373



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 9/65 (13%)
 Frame = -3

Query: 560 GFSASSRLRVCCGAGGPYNYNLTAACGFPG---------ASACANPATRINWDGIHMTET 408
           GF  S  L  CCG GG YNYN    CG               C  P   + WDG+H T+ 
Sbjct: 295 GFKGS--LVSCCGHGGKYNYNKGIGCGMKKIVKGKEVYIGKPCDEPDKAVVWDGVHFTQA 352

Query: 407 AYMYI 393
           A  +I
Sbjct: 353 ANKFI 357



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 20/67 (29%), Positives = 32/67 (47%)
 Frame = -3

Query: 593 VMEFLRTPTRFGFSASSRLRVCCGAGGPYNYNLTAACGFPGASACANPATRINWDGIHMT 414
           + + L TP  +GF  + +   CC  G     +  A C    +  C N ++ + WDG+H T
Sbjct: 459 ISQMLETPAAYGFEETKK--PCCKTG---LLSAGALCKKSTSKICPNTSSYLFWDGVHPT 513

Query: 413 ETAYMYI 393
           + AY  I
Sbjct: 514 QRAYKTI 520



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>EPN3_HUMAN (Q9H201) Epsin-3 (EPS-15-interacting protein 3)|
          Length = 632

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +1

Query: 451 GLAHALAPGKPHAAVKL*LYGPPAPQHTRSLDEALNPNLVGVLRNSIT 594
           GL  AL  GKP + V+L L+G P+P   ++  +  +   +G+L  ++T
Sbjct: 437 GLEQALPSGKPSSPVELDLFGDPSPSSKQNGTKEPDALDLGILGEALT 484



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>GUNX_CLOTM (P15329) Putative endoglucanase X (EC 3.2.1.4) (EGX)|
           (Endo-1,4-beta-glucanase) (Cellulase) (Fragment)
          Length = 224

 Score = 29.6 bits (65), Expect = 9.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 446 TRINWDGIHMTETAYMYIAAGW 381
           T I+WDG+H++E  Y  IA  W
Sbjct: 112 TDISWDGLHLSEIGYTKIANIW 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,730,958
Number of Sequences: 219361
Number of extensions: 1786224
Number of successful extensions: 3880
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3878
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6825954960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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