ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags18i22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa815... 123 8e-25
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
3dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 111 3e-21
4ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa815... 92 3e-15
5ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa815... 66 2e-07
6ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa814... 66 2e-07
7dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 66 2e-07
8dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
9dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
10gb|AY104591.1| Zea mays PCO098873 mRNA sequence 60 1e-05
11ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predic... 54 6e-04
12gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
13gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 54 6e-04
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 54 6e-04
15dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 6e-04
16ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predic... 50 0.010
17ref|XM_470389.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.010
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.010
19gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genom... 50 0.010
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.010
21dbj|AK108050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
22dbj|AK103825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
23dbj|AK059168.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.010
24gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.039
25gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.039
26ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa814... 46 0.15
27dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
28ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa814... 44 0.60
29ref|NM_192370.1| Oryza sativa (japonica cultivar-group), predic... 44 0.60
30gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full ... 44 0.60
31dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.60
32dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
33dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
34dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
35dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.60
36gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence 42 2.4
37gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosom... 42 2.4
38ref|XM_984204.1| PREDICTED: Mus musculus plexin A4, transcript v... 42 2.4
39gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome... 42 2.4
40gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full ... 42 2.4
41dbj|AK220402.1| Mus musculus mRNA for mKIAA1550 protein 42 2.4
42gb|AC113395.2| Homo sapiens chromosome 5 clone RP11-418P19, comp... 42 2.4
43dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
44dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
45dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
46gb|AC153629.3| Mus musculus 6 BAC RP23-462O13 (Roswell Park Canc... 42 2.4
47dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
48dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.4
49gb|AY107619.1| Zea mays PCO073125 mRNA sequence 42 2.4
50gb|AY104167.1| Zea mays PCO062696 mRNA sequence 42 2.4
51ref|NM_188523.1| Oryza sativa (japonica cultivar-group), Ozsa819... 40 9.4
52gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.4
53ref|XM_479304.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.4
54gb|AC147169.2| Xenopus tropicalis clone CH216-149I15, complete s... 40 9.4
55gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic ... 40 9.4
56gb|AC140981.3| Mus musculus chromosome 9 clone RP23-282G22, comp... 40 9.4
57gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, com... 40 9.4
58gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, com... 40 9.4
59gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, co... 40 9.4
60dbj|AB014344.1| Oryza rufipogon endornavirus genomic RNA, comple... 40 9.4
61dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
62gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosom... 40 9.4
63dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
64dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
65gb|AC011450.4|AC011450 Homo sapiens chromosome 19 clone CTC-301O... 40 9.4
66dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
67dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.4
68emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.4
69dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.4
70gb|AC006947.2|AC006947 Homo sapiens chromosome 17, clone hRPK.11... 40 9.4
71emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on ch... 40 9.4 
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA
          Length = 1137

 Score =  123 bits (62), Expect = 8e-25
 Identities = 181/221 (81%), Gaps = 6/221 (2%)
 Strand = Plus / Minus

                                                                        
Query: 352  ataggcggttgcgcgtaagggccccagagccaaccggcggcgatgtacatgtatgcagtc 411
            |||||||| |||||||| ||||| |  ||||| ||||||||||||     ||| || | |
Sbjct: 1115 ataggcggatgcgcgtacgggccgcgcagccagccggcggcgatgcgggcgtaggccgcc 1056

                                                                        
Query: 412  tccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgcc 471
            ||||| | |||||||||||||||| ||||    | ||||||||  | |||||||||||| 
Sbjct: 1055 tccgtgaggtggatgccgtcccagctgatggacgcggcggggtccgggcacgcgctcgcg 996

                                                                        
Query: 472  ccgggaaagccgcacgccgccgtcaagttgtagttgtacggc------ccgccggcgccg 525
            ||||| ||||||||||||||||||  ||||||||||||||||      |||||| |||||
Sbjct: 995  ccggggaagccgcacgccgccgtcgcgttgtagttgtacggcccgccgccgccgccgccg 936

                                                     
Query: 526  cagcacacgcggagcctcgacgaagcactaaacccgaatct 566
            |||||| | |||||||||||||| ||||| |||||||||||
Sbjct: 935  cagcacgcccggagcctcgacgaggcactgaacccgaatct 895
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 3e-21
 Identities = 175/215 (81%), Gaps = 6/215 (2%)
 Strand = Plus / Minus

                                                                           
Query: 352     ataggcggttgcgcgtaagggccccagagccaaccggcggcgatgtacatgtatgcagtc 411
               |||||||| |||||||| ||||| |  ||||| ||||||||||||     ||| || | |
Sbjct: 6366035 ataggcggatgcgcgtacgggccgcgcagccagccggcggcgatgcgggcgtaggccgcc 6365976

                                                                           
Query: 412     tccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgcc 471
               ||||| | |||||||||||||||| ||||    | ||||||||  | |||||||||||| 
Sbjct: 6365975 tccgtgaggtggatgccgtcccagctgatggacgcggcggggtccgggcacgcgctcgcg 6365916

                                                                           
Query: 472     ccgggaaagccgcacgccgccgtcaagttgtagttgtacggc------ccgccggcgccg 525
               ||||| ||||||||||||||||||  ||||||||||||||||      |||||| |||||
Sbjct: 6365915 ccggggaagccgcacgccgccgtcgcgttgtagttgtacggcccgccgccgccgccgccg 6365856

                                                  
Query: 526     cagcacacgcggagcctcgacgaagcactaaaccc 560
               |||||| | |||||||||||||| ||||| |||||
Sbjct: 6365855 cagcacgcccggagcctcgacgaggcactgaaccc 6365821



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                           
Query: 411     ctccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgc 470
               |||||||| ||||| |||||||||||||||    | ||||||||  | ||||||  ||||
Sbjct: 6362376 ctccgtcaggtggacgccgtcccagttgatcgacgcggcggggtccgggcacgccgtcgc 6362317

                                                                           
Query: 471     cccgggaaagccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagca 530
                ||||  | ||||||||||||||||  ||||||||||||| |||| ||| ||||||||||
Sbjct: 6362316 gccggcgaggccgcacgccgccgtcgcgttgtagttgtaccgccccccgccgccgcagca 6362257

                                 
Query: 531     cacgcggagcctcgacga 548
               | | ||||||||||||||
Sbjct: 6362256 cgcccggagcctcgacga 6362239



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 62/71 (87%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                           
Query: 481     ccgcacgccgccgtcaagttgtagttgtacggc---ccgccggcgccgcagcacacgcgg 537
               |||||||||||||||  || |||||||||||||   |||||||||||||||||| |||| 
Sbjct: 6380686 ccgcacgccgccgtcgcgtcgtagttgtacggcccgccgccggcgccgcagcacgcgcgt 6380627

                          
Query: 538     agcctcgacga 548
               ||| |||||||
Sbjct: 6380626 agcgtcgacga 6380616



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                           
Query: 330     agatcgtggcatggccttgagaataggcggttgcgcgtaagggccccagagccaaccggc 389
               ||||||| ||| ||||  ||| || ||||| |||||||| ||||| | |||||| |||||
Sbjct: 6342968 agatcgttgcacggccgcgaggatgggcggatgcgcgtacgggccgcggagccagccggc 6342909

                                                                           
Query: 390     ggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagttgatacgtgtggc 449
               |||||  |    ||| || | |||||| | |||||||||||||||||||||    | | |
Sbjct: 6342908 ggcgacctggccgtaggccgcctccgtgaggtggatgccgtcccagttgatcgccgcgtc 6342849

                                                                           
Query: 450     ggggttagcgcacgcgctcgccccgggaaagccgcacgccgccgtcaagttgtagttgta 509
               |||||  | ||||||   ||| ||||| |||||||||||||||| || || |||||||||
Sbjct: 6342848 ggggtccgggcacgccgccgcgccggggaagccgcacgccgccgccacgtcgtagttgta 6342789

                                
Query: 510     cggcccgccggcgccgc 526
               || ||||||| ||||||
Sbjct: 6342788 cgccccgccgccgccgc 6342772



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 480     gccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgc 526
               |||||||||| |||||  |||||||||||| || |||||| ||||||
Sbjct: 6356842 gccgcacgccaccgtcgcgttgtagttgtatggtccgccgccgccgc 6356796



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 410      tctccgtcatgtggatgccgtcccag 435
                ||||||||||||||| ||||||||||
Sbjct: 26281100 tctccgtcatgtggacgccgtcccag 26281075



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 498     gttgtagttgtacggcccgccggcgccgcagcac 531
               |||| ||||||||||||| ||| |||||||||||
Sbjct: 6320911 gttgaagttgtacggccctccgccgccgcagcac 6320878



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 498     gttgtagttgtacggcccgccggcgccgcagcacac 533
               |||| ||||||||||||||||  | |||||||||||
Sbjct: 6734938 gttgaagttgtacggcccgccccctccgcagcacac 6734973



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 411     ctccgtcatgtggatgccgtcccagttg 438
               |||||||| ||||| |||||||||||||
Sbjct: 6320998 ctccgtcaggtggacgccgtcccagttg 6320971
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0515G01
          Length = 175072

 Score =  111 bits (56), Expect = 3e-21
 Identities = 175/215 (81%), Gaps = 6/215 (2%)
 Strand = Plus / Minus

                                                                          
Query: 352    ataggcggttgcgcgtaagggccccagagccaaccggcggcgatgtacatgtatgcagtc 411
              |||||||| |||||||| ||||| |  ||||| ||||||||||||     ||| || | |
Sbjct: 137101 ataggcggatgcgcgtacgggccgcgcagccagccggcggcgatgcgggcgtaggccgcc 137042

                                                                          
Query: 412    tccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgcc 471
              ||||| | |||||||||||||||| ||||    | ||||||||  | |||||||||||| 
Sbjct: 137041 tccgtgaggtggatgccgtcccagctgatggacgcggcggggtccgggcacgcgctcgcg 136982

                                                                          
Query: 472    ccgggaaagccgcacgccgccgtcaagttgtagttgtacggc------ccgccggcgccg 525
              ||||| ||||||||||||||||||  ||||||||||||||||      |||||| |||||
Sbjct: 136981 ccggggaagccgcacgccgccgtcgcgttgtagttgtacggcccgccgccgccgccgccg 136922

                                                 
Query: 526    cagcacacgcggagcctcgacgaagcactaaaccc 560
              |||||| | |||||||||||||| ||||| |||||
Sbjct: 136921 cagcacgcccggagcctcgacgaggcactgaaccc 136887



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                          
Query: 411    ctccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgc 470
              |||||||| ||||| |||||||||||||||    | ||||||||  | ||||||  ||||
Sbjct: 133442 ctccgtcaggtggacgccgtcccagttgatcgacgcggcggggtccgggcacgccgtcgc 133383

                                                                          
Query: 471    cccgggaaagccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagca 530
               ||||  | ||||||||||||||||  ||||||||||||| |||| ||| ||||||||||
Sbjct: 133382 gccggcgaggccgcacgccgccgtcgcgttgtagttgtaccgccccccgccgccgcagca 133323

                                
Query: 531    cacgcggagcctcgacga 548
              | | ||||||||||||||
Sbjct: 133322 cgcccggagcctcgacga 133305



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 62/71 (87%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                          
Query: 481    ccgcacgccgccgtcaagttgtagttgtacggc---ccgccggcgccgcagcacacgcgg 537
              |||||||||||||||  || |||||||||||||   |||||||||||||||||| |||| 
Sbjct: 151752 ccgcacgccgccgtcgcgtcgtagttgtacggcccgccgccggcgccgcagcacgcgcgt 151693

                         
Query: 538    agcctcgacga 548
              ||| |||||||
Sbjct: 151692 agcgtcgacga 151682



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                          
Query: 330    agatcgtggcatggccttgagaataggcggttgcgcgtaagggccccagagccaaccggc 389
              ||||||| ||| ||||  ||| || ||||| |||||||| ||||| | |||||| |||||
Sbjct: 114034 agatcgttgcacggccgcgaggatgggcggatgcgcgtacgggccgcggagccagccggc 113975

                                                                          
Query: 390    ggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagttgatacgtgtggc 449
              |||||  |    ||| || | |||||| | |||||||||||||||||||||    | | |
Sbjct: 113974 ggcgacctggccgtaggccgcctccgtgaggtggatgccgtcccagttgatcgccgcgtc 113915

                                                                          
Query: 450    ggggttagcgcacgcgctcgccccgggaaagccgcacgccgccgtcaagttgtagttgta 509
              |||||  | ||||||   ||| ||||| |||||||||||||||| || || |||||||||
Sbjct: 113914 ggggtccgggcacgccgccgcgccggggaagccgcacgccgccgccacgtcgtagttgta 113855

                               
Query: 510    cggcccgccggcgccgc 526
              || ||||||| ||||||
Sbjct: 113854 cgccccgccgccgccgc 113838



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 480    gccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgc 526
              |||||||||| |||||  |||||||||||| || |||||| ||||||
Sbjct: 127908 gccgcacgccaccgtcgcgttgtagttgtatggtccgccgccgccgc 127862



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 498   gttgtagttgtacggcccgccggcgccgcagcac 531
             |||| ||||||||||||| ||| |||||||||||
Sbjct: 91977 gttgaagttgtacggccctccgccgccgcagcac 91944



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 411   ctccgtcatgtggatgccgtcccagttg 438
             |||||||| ||||| |||||||||||||
Sbjct: 92064 ctccgtcaggtggacgccgtcccagttg 92037
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>ref|NM_188455.1| Oryza sativa (japonica cultivar-group), Ozsa8150 predicted mRNA
          Length = 1149

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                        
Query: 411  ctccgtcatgtggatgccgtcccagttgatacgtgtggcggggttagcgcacgcgctcgc 470
            |||||||| ||||| |||||||||||||||    | ||||||||  | ||||||  ||||
Sbjct: 1068 ctccgtcaggtggacgccgtcccagttgatcgacgcggcggggtccgggcacgccgtcgc 1009

                                                                        
Query: 471  cccgggaaagccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagca 530
             ||||  | ||||||||||||||||  ||||||||||||| |||| ||| ||||||||||
Sbjct: 1008 gccggcgaggccgcacgccgccgtcgcgttgtagttgtaccgccccccgccgccgcagca 949

                              
Query: 531  cacgcggagcctcgacga 548
            | | ||||||||||||||
Sbjct: 948  cgcccggagcctcgacga 931
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>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA
          Length = 1110

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 62/71 (87%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                       
Query: 481 ccgcacgccgccgtcaagttgtagttgtacggc---ccgccggcgccgcagcacacgcgg 537
           |||||||||||||||  || |||||||||||||   |||||||||||||||||| |||| 
Sbjct: 959 ccgcacgccgccgtcgcgtcgtagttgtacggcccgccgccggcgccgcagcacgcgcgt 900

                      
Query: 538 agcctcgacga 548
           ||| |||||||
Sbjct: 899 agcgtcgacga 889
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>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA
          Length = 1194

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                        
Query: 330  agatcgtggcatggccttgagaataggcggttgcgcgtaagggccccagagccaaccggc 389
            ||||||| ||| ||||  ||| || ||||| |||||||| ||||| | |||||| |||||
Sbjct: 1143 agatcgttgcacggccgcgaggatgggcggatgcgcgtacgggccgcggagccagccggc 1084

                                                                        
Query: 390  ggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagttgatacgtgtggc 449
            |||||  |    ||| || | |||||| | |||||||||||||||||||||    | | |
Sbjct: 1083 ggcgacctggccgtaggccgcctccgtgaggtggatgccgtcccagttgatcgccgcgtc 1024

                                                                        
Query: 450  ggggttagcgcacgcgctcgccccgggaaagccgcacgccgccgtcaagttgtagttgta 509
            |||||  | ||||||   ||| ||||| |||||||||||||||| || || |||||||||
Sbjct: 1023 ggggtccgggcacgccgccgcgccggggaagccgcacgccgccgccacgtcgtagttgta 964

                             
Query: 510  cggcccgccggcgccgc 526
            || ||||||| ||||||
Sbjct: 963  cgccccgccgccgccgc 947
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>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0665D10
          Length = 134967

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 62/71 (87%), Gaps = 3/71 (4%)
 Strand = Plus / Minus

                                                                        
Query: 481  ccgcacgccgccgtcaagttgtagttgtacggc---ccgccggcgccgcagcacacgcgg 537
            |||||||||||||||  || |||||||||||||   |||||||||||||||||| |||| 
Sbjct: 3081 ccgcacgccgccgtcgcgtcgtagttgtacggcccgccgccggcgccgcagcacgcgcgt 3022

                       
Query: 538  agcctcgacga 548
            ||| |||||||
Sbjct: 3021 agcgtcgacga 3011
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>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full
            insert sequence
          Length = 1526

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                        
Query: 330  agatcgtggcatggccttgagaataggcggttgcgcgtaagggccccagagccaaccggc 389
            ||||||| ||| ||||  ||| || ||||| |||||||| ||||| | |||||| |||||
Sbjct: 1213 agatcgttgcacggccgcgaggatgggcggatgcgcgtacgggccgcggagccagccggc 1154

                                                                        
Query: 390  ggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagttgatacgtgtggc 449
            |||||  |    ||| || | |||||| | |||||||||||||||||||||    | | |
Sbjct: 1153 ggcgacctggccgtaggccgcctccgtgaggtggatgccgtcccagttgatcgccgcgtc 1094

                                                                        
Query: 450  ggggttagcgcacgcgctcgccccgggaaagccgcacgccgccgtcaagttgtagttgta 509
            |||||  | ||||||   ||| ||||| |||||||||||||||| || || |||||||||
Sbjct: 1093 ggggtccgggcacgccgccgcgccggggaagccgcacgccgccgccacgtcgtagttgta 1034

                             
Query: 510  cggcccgccggcgccgc 526
            || ||||||| ||||||
Sbjct: 1033 cgccccgccgccgccgc 1017
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>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full
            insert sequence
          Length = 1531

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 156/197 (79%)
 Strand = Plus / Minus

                                                                        
Query: 330  agatcgtggcatggccttgagaataggcggttgcgcgtaagggccccagagccaaccggc 389
            ||||||| ||| ||||  ||| || ||||| |||||||| ||||| | |||||| |||||
Sbjct: 1213 agatcgttgcacggccgcgaggatgggcggatgcgcgtacgggccgcggagccagccggc 1154

                                                                        
Query: 390  ggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagttgatacgtgtggc 449
            |||||  |    ||| || | |||||| | |||||||||||||||||||||    | | |
Sbjct: 1153 ggcgacctggccgtaggccgcctccgtgaggtggatgccgtcccagttgatcgccgcgtc 1094

                                                                        
Query: 450  ggggttagcgcacgcgctcgccccgggaaagccgcacgccgccgtcaagttgtagttgta 509
            |||||  | ||||||   ||| ||||| |||||||||||||||| || || |||||||||
Sbjct: 1093 ggggtccgggcacgccgccgcgccggggaagccgcacgccgccgccacgtcgtagttgta 1034

                             
Query: 510  cggcccgccggcgccgc 526
            || ||||||| ||||||
Sbjct: 1033 cgccccgccgccgccgc 1017
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>gb|AY104591.1| Zea mays PCO098873 mRNA sequence
          Length = 1094

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||||||||||||||||||||| |||||||||||
Sbjct: 1085 gttgtagttgtacggcccgccgccgccgcagcac 1052
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>ref|XM_476138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1113

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 481 ccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagcac 531
           ||||||| |||  ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 950 ccgcacgacgcgctcatgttgtagttgtacggcccaccgccgccgcagcac 900
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 481   ccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagcac 531
             ||||||| |||  ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 46116 ccgcacgacgcgctcatgttgtagttgtacggcccaccgccgccgcagcac 46066



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 498   gttgtagttgtacggcccgccggcgccgcagca 530
             |||||||||||||||||||||  ||||||||||
Sbjct: 61759 gttgtagttgtacggcccgcccccgccgcagca 61727



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                         
Query: 378   gagccaaccggcggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagtt 437
             |||||| ||| |||||| |||| ||||||| | ||| || |  |||||||||||||||||
Sbjct: 61879 gagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcccagtt 61820

               
Query: 438   ga 439
             ||
Sbjct: 61819 ga 61818
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07,
              complete sequence
          Length = 123167

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                 
Query: 481    ccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagcac 531
              ||||||| |||  ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 113017 ccgcacgacgcgctcatgttgtagttgtacggcccaccgccgccgcagcac 112967
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                  
Query: 481     ccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagcac 531
               ||||||| |||  ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 6741855 ccgcacgacgcgctcatgttgtagttgtacggcccaccgccgccgcagcac 6741805



 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 498     gttgtagttgtacggcccgccggcgccgcagca 530
               |||||||||||||||||||||  ||||||||||
Sbjct: 6757498 gttgtagttgtacggcccgcccccgccgcagca 6757466



 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 503      agttgtacggcccgccggcgccgcagca 530
                ||||||||||||||||| ||||||||||
Sbjct: 24821999 agttgtacggcccgccgccgccgcagca 24822026



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                           
Query: 378     gagccaaccggcggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagtt 437
               |||||| ||| |||||| |||| ||||||| | ||| || |  |||||||||||||||||
Sbjct: 6757618 gagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcccagtt 6757559

                 
Query: 438     ga 439
               ||
Sbjct: 6757558 ga 6757557
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>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full
            insert sequence
          Length = 1551

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 481  ccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgcagcac 531
            ||||||| |||  ||| |||||||||||||||||| ||| |||||||||||
Sbjct: 1040 ccgcacgacgcgctcatgttgtagttgtacggcccaccgccgccgcagcac 990
to top
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 498 gttgtagttgtacggcccgccggcgccgcagca 530
           |||||||||||||||||||||  ||||||||||
Sbjct: 975 gttgtagttgtacggcccgcccccgccgcagca 943



 Score = 44.1 bits (22), Expect = 0.60
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                        
Query: 378  gagccaaccggcggcgatgtacatgtatgcagtctccgtcatgtggatgccgtcccagtt 437
            |||||| ||| |||||| |||| ||||||| | ||| || |  |||||||||||||||||
Sbjct: 1095 gagccagccgccggcgacgtacttgtatgcggcctcggtgagatggatgccgtcccagtt 1036

              
Query: 438  ga 439
            ||
Sbjct: 1035 ga 1034
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>ref|XM_470389.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1425

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 411  ctccgtcatgtggatgccgtcccagttga 439
            |||||||||||||| ||||||||||||||
Sbjct: 1058 ctccgtcatgtggacgccgtcccagttga 1030
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 411      ctccgtcatgtggatgccgtcccagttga 439
                |||||||||||||| ||||||||||||||
Sbjct: 35200023 ctccgtcatgtggacgccgtcccagttga 35200051



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 457      gcgcacgcgctcgccccggg 476
                ||||||||||||||||||||
Sbjct: 22381453 gcgcacgcgctcgccccggg 22381434
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>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete
             sequence
          Length = 156606

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 411   ctccgtcatgtggatgccgtcccagttga 439
             |||||||||||||| ||||||||||||||
Sbjct: 78784 ctccgtcatgtggacgccgtcccagttga 78812
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 411      ctccgtcatgtggatgccgtcccagttga 439
                |||||||||||||| ||||||||||||||
Sbjct: 35290095 ctccgtcatgtggacgccgtcccagttga 35290123



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 457      gcgcacgcgctcgccccggg 476
                ||||||||||||||||||||
Sbjct: 22374482 gcgcacgcgctcgccccggg 22374463
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>dbj|AK108050.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-G04, full
           insert sequence
          Length = 1371

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 411 ctccgtcatgtggatgccgtcccagttga 439
           |||||||||||||| ||||||||||||||
Sbjct: 783 ctccgtcatgtggacgccgtcccagttga 811
to top
>dbj|AK103825.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147L02, full
           insert sequence
          Length = 586

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 411 ctccgtcatgtggatgccgtcccagttga 439
           |||||||||||||| ||||||||||||||
Sbjct: 350 ctccgtcatgtggacgccgtcccagttga 322
to top
>dbj|AK059168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-E06, full
            insert sequence
          Length = 1425

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 411  ctccgtcatgtggatgccgtcccagttga 439
            |||||||||||||| ||||||||||||||
Sbjct: 1058 ctccgtcatgtggacgccgtcccagttga 1030
to top
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01,
              complete sequence
          Length = 118799

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 503    agttgtacggcccgccggcgccgcagca 530
              ||||||||||||||||| ||||||||||
Sbjct: 103982 agttgtacggcccgccgccgccgcagca 104009
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>gb|AC129719.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0013J02, complete sequence
          Length = 118026

 Score = 48.1 bits (24), Expect = 0.039
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 503  agttgtacggcccgccggcgccgcagca 530
            ||||||||||||||||| ||||||||||
Sbjct: 8884 agttgtacggcccgccgccgccgcagca 8911
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>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA
          Length = 1137

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 480 gccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgc 526
           |||||||||| |||||  |||||||||||| || |||||| ||||||
Sbjct: 981 gccgcacgccaccgtcgcgttgtagttgtatggtccgccgccgccgc 935
to top
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full
            insert sequence
          Length = 1723

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 480  gccgcacgccgccgtcaagttgtagttgtacggcccgccggcgccgc 526
            |||||||||| |||||  |||||||||||| || |||||| ||||||
Sbjct: 1210 gccgcacgccaccgtcgcgttgtagttgtatggtccgccgccgccgc 1164
to top
>ref|NM_188447.1| Oryza sativa (japonica cultivar-group), Ozsa8142 predicted mRNA
          Length = 1125

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 498 gttgtagttgtacggcccgccggcgccgcagcac 531
           |||| ||||||||||||| ||| |||||||||||
Sbjct: 972 gttgaagttgtacggccctccgccgccgcagcac 939



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1059 ctccgtcaggtggacgccgtcccagttg 1032
to top
>ref|NM_192370.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 410  tctccgtcatgtggatgccgtcccag 435
            ||||||||||||||| ||||||||||
Sbjct: 1075 tctccgtcatgtggacgccgtcccag 1050
to top
>gb|BT009193.1| Triticum aestivum clone wle1.pk0001.d6:fis, full insert mRNA sequence
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||| ||||||||||||| ||| |||||||||||
Sbjct: 1052 gttgaagttgtacggccccccgccgccgcagcac 1019



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1139 ctccgtcaggtggacgccgtcccagttg 1112
to top
>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1159_D09
          Length = 147770

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 410   tctccgtcatgtggatgccgtcccag 435
             ||||||||||||||| ||||||||||
Sbjct: 93781 tctccgtcatgtggacgccgtcccag 93756
to top
>dbj|AK119642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F10, full
            insert sequence
          Length = 1452

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||| ||||||||||||| ||| |||||||||||
Sbjct: 1035 gttgaagttgtacggccctccgccgccgcagcac 1002



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1122 ctccgtcaggtggacgccgtcccagttg 1095
to top
>dbj|AK119598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E01, full
            insert sequence
          Length = 1520

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||| ||||||||||||| ||| |||||||||||
Sbjct: 1032 gttgaagttgtacggccctccgccgccgcagcac 999



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1119 ctccgtcaggtggacgccgtcccagttg 1092
to top
>dbj|AK061118.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F05, full
            insert sequence
          Length = 1577

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||| ||||||||||||| ||| |||||||||||
Sbjct: 1035 gttgaagttgtacggccctccgccgccgcagcac 1002



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1122 ctccgtcaggtggacgccgtcccagttg 1095
to top
>dbj|AK059088.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-B07, full
            insert sequence
          Length = 1691

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 498  gttgtagttgtacggcccgccggcgccgcagcac 531
            |||| ||||||||||||| ||| |||||||||||
Sbjct: 1295 gttgaagttgtacggccctccgccgccgcagcac 1262



 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 411  ctccgtcatgtggatgccgtcccagttg 438
            |||||||| ||||| |||||||||||||
Sbjct: 1382 ctccgtcaggtggacgccgtcccagttg 1355
to top
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence
          Length = 1420

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 415  gtcatgtggatgccgtcccag 435
            |||||||||||||||||||||
Sbjct: 1163 gtcatgtggatgccgtcccag 1143
to top
>gb|AC163631.5| Mus musculus BAC clone RP23-147B15 from chromosome 13, complete sequence
          Length = 211368

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 198    tggagaatgaaggttgctgccgcag 222
              |||||||| ||||||||||||||||
Sbjct: 174782 tggagaataaaggttgctgccgcag 174806
to top
>ref|XM_984204.1| PREDICTED: Mus musculus plexin A4, transcript variant 2 (Plxna4),
            mRNA
          Length = 11898

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 186  gcatgcaatgcatggagaatgaagg 210
            |||||| ||||||||||||||||||
Sbjct: 7362 gcatgctatgcatggagaatgaagg 7338
to top
>gb|AC124537.5| Mus musculus BAC clone RP23-333J6 from chromosome 13, complete sequence
          Length = 186870

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 198   tggagaatgaaggttgctgccgcag 222
             |||||||| ||||||||||||||||
Sbjct: 76227 tggagaataaaggttgctgccgcag 76251
to top
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence
          Length = 1472

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 415  gtcatgtggatgccgtcccag 435
            |||||||||||||||||||||
Sbjct: 1100 gtcatgtggatgccgtcccag 1080
to top
>dbj|AK220402.1| Mus musculus mRNA for mKIAA1550 protein
          Length = 5162

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 186  gcatgcaatgcatggagaatgaagg 210
            |||||| ||||||||||||||||||
Sbjct: 2281 gcatgctatgcatggagaatgaagg 2257
to top
>gb|AC113395.2| Homo sapiens chromosome 5 clone RP11-418P19, complete sequence
          Length = 195369

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   gcatggagaatgaaggttgct 215
             |||||||||||||||||||||
Sbjct: 29288 gcatggagaatgaaggttgct 29308
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 415      gtcatgtggatgccgtcccag 435
                |||||||||||||||||||||
Sbjct: 19518652 gtcatgtggatgccgtcccag 19518672
to top
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0506C10
          Length = 150549

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 415 gtcatgtggatgccgtcccag 435
           |||||||||||||||||||||
Sbjct: 384 gtcatgtggatgccgtcccag 404
to top
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0410C01
          Length = 138424

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 415    gtcatgtggatgccgtcccag 435
              |||||||||||||||||||||
Sbjct: 137061 gtcatgtggatgccgtcccag 137081
to top
>gb|AC153629.3| Mus musculus 6 BAC RP23-462O13 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 177194

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 186   gcatgcaatgcatggagaatgaagg 210
             |||||| ||||||||||||||||||
Sbjct: 16577 gcatgctatgcatggagaatgaagg 16601
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>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full
            insert sequence
          Length = 1580

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 415  gtcatgtggatgccgtcccag 435
            |||||||||||||||||||||
Sbjct: 1179 gtcatgtggatgccgtcccag 1159
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>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full
            insert sequence
          Length = 1323

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 415  gtcatgtggatgccgtcccag 435
            |||||||||||||||||||||
Sbjct: 1175 gtcatgtggatgccgtcccag 1155
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>gb|AY107619.1| Zea mays PCO073125 mRNA sequence
          Length = 617

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 415 gtcatgtggatgccgtcccag 435
           |||||||||||||||||||||
Sbjct: 251 gtcatgtggatgccgtcccag 231
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>gb|AY104167.1| Zea mays PCO062696 mRNA sequence
          Length = 1460

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 411  ctccgtcatgtggatgccgtcccag 435
            |||||||| ||||||||||||||||
Sbjct: 1090 ctccgtcaggtggatgccgtcccag 1066
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>ref|NM_188523.1| Oryza sativa (japonica cultivar-group), Ozsa8192 predicted mRNA
          Length = 651

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 498 gttgtagttgtacggcccgccggcgccgcagcacac 533
           |||| ||||||||||||||||  | |||||||||||
Sbjct: 135 gttgaagttgtacggcccgccccctccgcagcacac 100
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 595     cggcgtgtagtagtcgccgt 614
               ||||||||||||||||||||
Sbjct: 2608460 cggcgtgtagtagtcgccgt 2608441
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>ref|XM_479304.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1283

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 504  gttgtacggcccgccggcgccgcagcac 531
            |||||||||||||||| || ||||||||
Sbjct: 1036 gttgtacggcccgccgccggcgcagcac 1009
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>gb|AC147169.2| Xenopus tropicalis clone CH216-149I15, complete sequence
          Length = 165948

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    aagagtagcatgcaatgcat 198
              ||||||||||||||||||||
Sbjct: 101591 aagagtagcatgcaatgcat 101572
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>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete
             sequence
          Length = 73070

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   gcgcacgcgctcgccccggg 476
             ||||||||||||||||||||
Sbjct: 30991 gcgcacgcgctcgccccggg 31010
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>gb|AC140981.3| Mus musculus chromosome 9 clone RP23-282G22, complete sequence
          Length = 174329

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   atgcaacagaattattacat 141
             ||||||||||||||||||||
Sbjct: 41917 atgcaacagaattattacat 41898
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>gb|AC145076.8| Mus musculus chromosome 10, clone RP24-528G5, complete sequence
          Length = 224534

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   gtgtcctgagaaactccatc 591
             ||||||||||||||||||||
Sbjct: 90609 gtgtcctgagaaactccatc 90628
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>gb|AC008891.7| Homo sapiens chromosome 19 clone CTD-2226J19, complete sequence
          Length = 117628

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   ccatgctgctttaatttata 97
            ||||||||||||||||||||
Sbjct: 4203 ccatgctgctttaatttata 4222
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>gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, complete sequence
          Length = 176613

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ggatttacatataccatgct 84
             ||||||||||||||||||||
Sbjct: 95875 ggatttacatataccatgct 95856
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>dbj|AB014344.1| Oryza rufipogon endornavirus genomic RNA, complete genome
          Length = 13936

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    aatagtgtggcaaaggaagg 43
             ||||||||||||||||||||
Sbjct: 12952 aatagtgtggcaaaggaagg 12971
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 504      gttgtacggcccgccggcgccgcagcac 531
                |||||||||||||||| || ||||||||
Sbjct: 26674305 gttgtacggcccgccgccggcgcagcac 26674332
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>gb|AC154224.1| Mus musculus BAC clone RP24-141J15 from chromosome 13, complete
             sequence
          Length = 146998

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    ataccatgctgctttaattt 94
             ||||||||||||||||||||
Sbjct: 24765 ataccatgctgctttaattt 24746
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>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0443E05
          Length = 176935

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 498   gttgtagttgtacggcccgccggcgccgcagcacac 533
             |||| ||||||||||||||||  | |||||||||||
Sbjct: 87090 gttgaagttgtacggcccgccccctccgcagcacac 87125
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>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0417G05
          Length = 147803

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 498   gttgtagttgtacggcccgccggcgccgcagcacac 533
             |||| ||||||||||||||||  | |||||||||||
Sbjct: 16999 gttgaagttgtacggcccgccccctccgcagcacac 17034
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>gb|AC011450.4|AC011450 Homo sapiens chromosome 19 clone CTC-301O7, complete sequence
          Length = 106168

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    ccatgctgctttaatttata 97
             ||||||||||||||||||||
Sbjct: 89971 ccatgctgctttaatttata 89990
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>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1003_C06
          Length = 143168

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 504   gttgtacggcccgccggcgccgcagcac 531
             |||||||||||||||| || ||||||||
Sbjct: 21162 gttgtacggcccgccgccggcgcagcac 21189
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 504   gttgtacggcccgccggcgccgcagcac 531
             |||||||||||||||| || ||||||||
Sbjct: 91909 gttgtacggcccgccgccggcgcagcac 91936
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 515   cgccggcgccgcagcacacg 534
             ||||||||||||||||||||
Sbjct: 94116 cgccggcgccgcagcacacg 94097
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>dbj|AK058442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-G02, full
            insert sequence
          Length = 1283

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 504  gttgtacggcccgccggcgccgcagcac 531
            |||||||||||||||| || ||||||||
Sbjct: 1036 gttgtacggcccgccgccggcgcagcac 1009
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>gb|AC006947.2|AC006947 Homo sapiens chromosome 17, clone hRPK.115_C_3, complete sequence
          Length = 175775

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   gtgtcctgagaaactccatc 591
             ||||||||||||||||||||
Sbjct: 75706 gtgtcctgagaaactccatc 75725
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>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete
             sequence
          Length = 228645

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   aatgcatggagaatgaaggt 211
             ||||||||||||||||||||
Sbjct: 69095 aatgcatggagaatgaaggt 69114


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,014,916
Number of Sequences: 3902068
Number of extensions: 5014916
Number of successful extensions: 93925
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93286
Number of HSP's gapped (non-prelim): 632
length of query: 688
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 665
effective length of database: 17,143,297,704
effective search space: 11400292973160
effective search space used: 11400292973160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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